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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8024E12.3
        

               
Conread position:
               
552-751
               

               
Cow position:
               
chr27:29236724-29236522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
552-949
               

               
Cow position:
               
chr27:21408409-21408821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
41, 171
               

               
Conread position:
               
558-768
               

               
Cow position:
               
chr27:7537938-7538150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
565-951
               

               
Cow position:
               
chr27:10307169-10307557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
566-766
               

               
Cow position:
               
chr27:27040737-27040531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
566-855
               

               
Cow position:
               
chr27:8263210-8263498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
567-960
               

               
Cow position:
               
chr27:20636942-20637320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
569-799
               

               
Cow position:
               
chr27:20789253-20789483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
569-855
               

               
Cow position:
               
chr27:27270412-27270701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 100
               

               
Conread position:
               
569-940
               

               
Cow position:
               
chr27:19718046-19717656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
569-941
               

               
Cow position:
               
chr27:10582489-10582128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
19, 94
               

               
Conread position:
               
569-947
               

               
Cow position:
               
chr27:26481086-26481446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
570-820
               

               
Cow position:
               
chr27:29399940-29399701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
572-875
               

               
Cow position:
               
chr27:30359525-30359227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
572-935
               

               
Cow position:
               
chr27:19661058-19660690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
572-951
               

               
Cow position:
               
chr27:28001692-28002057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
574-820
               

               
Cow position:
               
chr27:30672446-30672683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
574-927
               

               
Cow position:
               
chr27:19685593-19685939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
147, 50
               

               
Conread position:
               
574-929
               

               
Cow position:
               
chr27:26424465-26424807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
574-948
               

               
Cow position:
               
chr27:15867517-15867143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
574-948
               

               
Cow position:
               
chr27:20078984-20078615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
574-950
               

               
Cow position:
               
chr27:30765157-30764780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 205
               

               
Conread position:
               
574-959
               

               
Cow position:
               
chr27:6550576-6550196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
576-859
               

               
Cow position:
               
chr27:8353590-8353314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
576-944
               

               
Cow position:
               
chr27:22549671-22550016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
231, 15
               

               
Conread position:
               
576-959
               

               
Cow position:
               
chr27:19668679-19669066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
577-752
               

               
Cow position:
               
chr27:4011795-4011622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
577-842
               

               
Cow position:
               
chr27:24014624-24014886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
577-844
               

               
Cow position:
               
chr27:9169528-9169787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
577-875
               

               
Cow position:
               
chr27:30988914-30988618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 149
               

               
Conread position:
               
577-879
               

               
Cow position:
               
chr27:28271030-28271334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
15, 137
               

               
Conread position:
               
577-880
               

               
Cow position:
               
chr27:1290748-1291033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
577-924
               

               
Cow position:
               
chr27:26239141-26238798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
577-944
               

               
Cow position:
               
chr27:11480513-11480884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 306
               

               
Conread position:
               
577-951
               

               
Cow position:
               
chr27:18544114-18543734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
42, 150
               

               
Conread position:
               
577-958
               

               
Cow position:
               
chr27:23632714-23632350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
9, 76
               

               
Conread position:
               
577-959
               

               
Cow position:
               
chr27:13252122-13251768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
577-959
               

               
Cow position:
               
chr27:27003160-27003526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
578-875
               

               
Cow position:
               
chr27:22454662-22454956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
578-951
               

               
Cow position:
               
chr27:26226175-26226543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
579-937
               

               
Cow position:
               
chr27:19546393-19546760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
579-949
               

               
Cow position:
               
chr27:18558470-18558107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
580-842
               

               
Cow position:
               
chr27:26135250-26135005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
580-951
               

               
Cow position:
               
chr27:7935044-7935408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
581-766
               

               
Cow position:
               
chr27:2683031-2683216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
39, 126
               

               
Conread position:
               
581-820
               

               
Cow position:
               
chr27:27843884-27844127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
581-842
               

               
Cow position:
               
chr27:26151132-26150871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
135, 42
               

               
Conread position:
               
581-866
               

               
Cow position:
               
chr27:26218818-26218537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
98, 89
               

               
Conread position:
               
581-875
               

               
Cow position:
               
chr27:4385952-4386241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
149, 16
               

               
Conread position:
               
581-875
               

               
Cow position:
               
chr27:16589604-16589882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
141, 43
               

               
Conread position:
               
581-878
               

               
Cow position:
               
chr27:10992466-10992167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
581-937
               

               
Cow position:
               
chr27:26643791-26643464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
581-941
               

               
Cow position:
               
chr27:27388912-27389270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
581-944
               

               
Cow position:
               
chr27:4390146-4390503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
128, 43
               

               
Conread position:
               
581-944
               

               
Cow position:
               
chr27:19496987-19496633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
581-945
               

               
Cow position:
               
chr27:28496266-28496617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
6, 40
               

               
Conread position:
               
581-947
               

               
Cow position:
               
chr27:24227681-24228055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
581-959
               

               
Cow position:
               
chr27:27554571-27554943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
93, 88
               

               
Conread position:
               
583-959
               

               
Cow position:
               
chr27:17994832-17995202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
585-938
               

               
Cow position:
               
chr27:299280-299614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
145, 33
               

               
Conread position:
               
585-941
               

               
Cow position:
               
chr27:22440244-22439894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
585-942
               

               
Cow position:
               
chr27:26999312-26999667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
67, 58
               

               
Conread position:
               
585-950
               

               
Cow position:
               
chr27:27136412-27136792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
585-958
               

               
Cow position:
               
chr27:26509053-26509417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 103
               

               
Conread position:
               
587-949
               

               
Cow position:
               
chr27:6925195-6924831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
589-949
               

               
Cow position:
               
chr27:15925447-15925090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
591-700
               

               
Cow position:
               
chr27:23455049-23455162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-706
               

               
Cow position:
               
chr27:27259710-27259598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
591-730
               

               
Cow position:
               
chr27:20592085-20591945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 125
               

               
Conread position:
               
591-748
               

               
Cow position:
               
chr27:10395157-10395312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
591-753
               

               
Cow position:
               
chr27:22268602-22268443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
591-761
               

               
Cow position:
               
chr27:14902551-14902719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
591-766
               

               
Cow position:
               
chr27:26141873-26141699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 118
               

               
Conread position:
               
591-805
               

               
Cow position:
               
chr27:12429504-12429297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
591-807
               

               
Cow position:
               
chr27:20918990-20918779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
591-819
               

               
Cow position:
               
chr27:1498418-1498192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
591-820
               

               
Cow position:
               
chr27:4812779-4813008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
591-830
               

               
Cow position:
               
chr27:16625998-16625765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
131, 17
               

               
Conread position:
               
591-839
               

               
Cow position:
               
chr27:715604-715357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
124, 97
               

               
Conread position:
               
591-840
               

               
Cow position:
               
chr27:29504546-29504794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
591-842
               

               
Cow position:
               
chr27:18593368-18593126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
591-842
               

               
Cow position:
               
chr27:30354242-30354491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
591-855
               

               
Cow position:
               
chr27:4673120-4672852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
591-857
               

               
Cow position:
               
chr27:23882276-23882529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
591-862
               

               
Cow position:
               
chr27:20641240-20641501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
257, 27
               

               
Conread position:
               
591-863
               

               
Cow position:
               
chr27:26581334-26581604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
591-877
               

               
Cow position:
               
chr27:29380964-29380673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
17, 127
               

               
Conread position:
               
591-883
               

               
Cow position:
               
chr27:20497315-20497018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
591-890
               

               
Cow position:
               
chr27:13274053-13274356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
198, 113
               

               
Conread position:
               
591-922
               

               
Cow position:
               
chr27:22426727-22427059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
591-924
               

               
Cow position:
               
chr27:1768526-1768843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
591-929
               

               
Cow position:
               
chr27:23554223-23554560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
591-929
               

               
Cow position:
               
chr27:28245902-28245550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
176, 111
               

               
Conread position:
               
591-930
               

               
Cow position:
               
chr27:27442069-27442392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
591-933
               

               
Cow position:
               
chr27:15408942-15409260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-933
               

               
Cow position:
               
chr27:16705348-16705018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
178, 57
               

               
Conread position:
               
591-934
               

               
Cow position:
               
chr27:7731147-7731510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-934
               

               
Cow position:
               
chr27:26865019-26865344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-937
               

               
Cow position:
               
chr27:3306871-3306547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
591-937
               

               
Cow position:
               
chr27:12596866-12596543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
149, 37
               

               
Conread position:
               
591-937
               

               
Cow position:
               
chr27:22220651-22220311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
132, 29
               

               
Conread position:
               
591-937
               

               
Cow position:
               
chr27:29493811-29494137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-939
               

               
Cow position:
               
chr27:30582841-30582499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 118
               

               
Conread position:
               
591-940
               

               
Cow position:
               
chr27:22386971-22386646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-940
               

               
Cow position:
               
chr27:28018434-28018081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:6500162-6499815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:7412480-7412150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
341, 32
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:7649487-7649834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:8629772-8630117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:10979961-10979617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:17397349-17397694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 267
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:22171401-22171059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:22547307-22547631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:23545219-23545581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:25809414-25809759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:28931690-28932045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:30814515-30814174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
111, 34
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr27:30868641-30868994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
591-944
               

               
Cow position:
               
chr27:7614987-7615315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
139, 106
               

               
Conread position:
               
591-944
               

               
Cow position:
               
chr27:12516296-12515948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
591-945
               

               
Cow position:
               
chr27:31372878-31373219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
591-947
               

               
Cow position:
               
chr27:27632509-27632842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
591-948
               

               
Cow position:
               
chr27:13841474-13841114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr27:6541730-6541384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr27:13638891-13639238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr27:14670283-14670632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr27:18030959-18031321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 214
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr27:23128561-23128214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr27:30260791-30261146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
164, 65
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr27:30871958-30872308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 75
               

               
Conread position:
               
591-951
               

               
Cow position:
               
chr27:8168328-8168673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
45, 106
               

               
Conread position:
               
591-951
               

               
Cow position:
               
chr27:20045987-20045643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
591-951
               

               
Cow position:
               
chr27:24477514-24477172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
177, 36
               

               
Conread position:
               
591-956
               

               
Cow position:
               
chr27:23594417-23594062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 32
               

               
Conread position:
               
591-958
               

               
Cow position:
               
chr27:27020001-27020354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 135
               

               
Conread position:
               
591-958
               

               
Cow position:
               
chr27:30890388-30890043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-959
               

               
Cow position:
               
chr27:815467-815073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 32
               

               
Conread position:
               
591-959
               

               
Cow position:
               
chr27:1353691-1353319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 343
               

               
Conread position:
               
591-959
               

               
Cow position:
               
chr27:11435220-11435587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
591-959
               

               
Cow position:
               
chr27:15866325-15865968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
591-959
               

               
Cow position:
               
chr27:26428031-26428387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
131, 102
               

               
Conread position:
               
591-959
               

               
Cow position:
               
chr27:27438403-27438769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
591-960
               

               
Cow position:
               
chr27:21991257-21990880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
592-751
               

               
Cow position:
               
chr27:20570222-20570064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
592-753
               

               
Cow position:
               
chr27:16238005-16237851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
592-798
               

               
Cow position:
               
chr27:19647839-19648045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 32
               

               
Conread position:
               
592-803
               

               
Cow position:
               
chr27:21350919-21351129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
592-806
               

               
Cow position:
               
chr27:11081297-11081090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
592-819
               

               
Cow position:
               
chr27:4858546-4858763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
592-842
               

               
Cow position:
               
chr27:1123131-1122885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
592-897
               

               
Cow position:
               
chr27:22418668-22418963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
592-927
               

               
Cow position:
               
chr27:27694672-27695004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
592-929
               

               
Cow position:
               
chr27:22735502-22735825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
592-933
               

               
Cow position:
               
chr27:18739488-18739139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
592-935
               

               
Cow position:
               
chr27:435335-434993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
592-941
               

               
Cow position:
               
chr27:7346764-7346427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
301, 43
               

               
Conread position:
               
592-941
               

               
Cow position:
               
chr27:11151776-11151427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
592-949
               

               
Cow position:
               
chr27:13875831-13875482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
592-949
               

               
Cow position:
               
chr27:15871263-15870908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
592-951
               

               
Cow position:
               
chr27:6788056-6787699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
132, 114
               

               
Conread position:
               
592-957
               

               
Cow position:
               
chr27:17331599-17331230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
592-958
               

               
Cow position:
               
chr27:15668670-15669034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
592-960
               

               
Cow position:
               
chr27:17472913-17472549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 121
               

               
Conread position:
               
593-742
               

               
Cow position:
               
chr27:30843976-30844125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 64
               

               
Conread position:
               
593-754
               

               
Cow position:
               
chr27:1183778-1183943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
593-767
               

               
Cow position:
               
chr27:6523142-6522972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
593-809
               

               
Cow position:
               
chr27:25380092-25379874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
593-859
               

               
Cow position:
               
chr27:26413154-26413418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
593-863
               

               
Cow position:
               
chr27:12246756-12246487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
593-874
               

               
Cow position:
               
chr27:27640896-27641189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
34, 214
               

               
Conread position:
               
593-875
               

               
Cow position:
               
chr27:15643271-15642995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
129, 109
               

               
Conread position:
               
593-918
               

               
Cow position:
               
chr27:11536001-11536327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
593-925
               

               
Cow position:
               
chr27:23891040-23890706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
593-929
               

               
Cow position:
               
chr27:26489806-26490136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 30
               

               
Conread position:
               
593-939
               

               
Cow position:
               
chr27:24331824-24331473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 114
               

               
Conread position:
               
593-939
               

               
Cow position:
               
chr27:27460476-27460819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
593-940
               

               
Cow position:
               
chr27:27245254-27245604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
225, 30
               

               
Conread position:
               
593-941
               

               
Cow position:
               
chr27:20354683-20354357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
593-943
               

               
Cow position:
               
chr27:22603270-22602929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
240, 64
               

               
Conread position:
               
593-944
               

               
Cow position:
               
chr27:16786922-16786585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
593-945
               

               
Cow position:
               
chr27:29816524-29816876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
593-949
               

               
Cow position:
               
chr27:30915105-30914756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 32
               

               
Conread position:
               
593-950
               

               
Cow position:
               
chr27:2592648-2592284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
593-950
               

               
Cow position:
               
chr27:20748910-20749255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
593-951
               

               
Cow position:
               
chr27:16284568-16284235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 30
               

               
Conread position:
               
593-951
               

               
Cow position:
               
chr27:28518389-28518043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 53
               

               
Conread position:
               
593-956
               

               
Cow position:
               
chr27:29831588-29831963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
593-959
               

               
Cow position:
               
chr27:20828613-20828965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
593-960
               

               
Cow position:
               
chr27:19388113-19387761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
593-960
               

               
Cow position:
               
chr27:28921799-28922157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 33
               

               
Conread position:
               
594-895
               

               
Cow position:
               
chr27:26807465-26807756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
166, 30
               

               
Conread position:
               
594-928
               

               
Cow position:
               
chr27:26188919-26188597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
109, 5
               

               
Conread position:
               
595-864
               

               
Cow position:
               
chr27:31148858-31148593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
595-941
               

               
Cow position:
               
chr27:427066-426727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
595-951
               

               
Cow position:
               
chr27:29184742-29185098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 7
               

               
Conread position:
               
595-959
               

               
Cow position:
               
chr27:23930069-23929718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
596-728
               

               
Cow position:
               
chr27:20118502-20118374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
596-732
               

               
Cow position:
               
chr27:27550648-27550777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
596-750
               

               
Cow position:
               
chr27:26398163-26398313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
596-753
               

               
Cow position:
               
chr27:31159900-31159742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
596-848
               

               
Cow position:
               
chr27:20553816-20553579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
596-867
               

               
Cow position:
               
chr27:25277237-25276972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
596-910
               

               
Cow position:
               
chr27:24940006-24939683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 272
               

               
Conread position:
               
596-939
               

               
Cow position:
               
chr27:22559725-22560067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
23, 181
               

               
Conread position:
               
596-941
               

               
Cow position:
               
chr27:15454307-15453970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
596-941
               

               
Cow position:
               
chr27:16103903-16103568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
596-948
               

               
Cow position:
               
chr27:23736058-23735720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
596-951
               

               
Cow position:
               
chr27:29693566-29693213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
596-955
               

               
Cow position:
               
chr27:30406941-30407304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
596-959
               

               
Cow position:
               
chr27:22035281-22035635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
597-695
               

               
Cow position:
               
chr27:673949-674047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
597-847
               

               
Cow position:
               
chr27:20092743-20092986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
597-877
               

               
Cow position:
               
chr27:23483320-23483044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
597-950
               

               
Cow position:
               
chr27:16275576-16275934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
597-951
               

               
Cow position:
               
chr27:29431552-29431222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
598-824
               

               
Cow position:
               
chr27:29312579-29312803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
123, 24
               

               
Conread position:
               
598-941
               

               
Cow position:
               
chr27:23511084-23510732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
598-941
               

               
Cow position:
               
chr27:28896969-28896633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
598-950
               

               
Cow position:
               
chr27:15315603-15315271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
600-938
               

               
Cow position:
               
chr27:18646053-18646389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
600-941
               

               
Cow position:
               
chr27:23917944-23918277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
602-848
               

               
Cow position:
               
chr27:30389206-30389450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
602-927
               

               
Cow position:
               
chr27:29086023-29086345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
153, 48
               

               
Conread position:
               
602-936
               

               
Cow position:
               
chr27:15865696-15865372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
602-937
               

               
Cow position:
               
chr27:20101457-20101128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
603-928
               

               
Cow position:
               
chr27:13317869-13318207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
604-955
               

               
Cow position:
               
chr27:7971658-7971304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
106, 184
               

               
Conread position:
               
604-958
               

               
Cow position:
               
chr27:16780956-16780595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
604-959
               

               
Cow position:
               
chr27:19500146-19500497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 102
               

               
Conread position:
               
605-956
               

               
Cow position:
               
chr27:8942595-8942950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
147, 116
               

               
Conread position:
               
607-957
               

               
Cow position:
               
chr27:14893738-14894088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
226, 102
               

               
Conread position:
               
612-855
               

               
Cow position:
               
chr27:27038759-27038997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
614-941
               

               
Cow position:
               
chr27:590687-591011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
615-750
               

               
Cow position:
               
chr27:26979630-26979767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
617-937
               

               
Cow position:
               
chr27:23582938-23582635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
272, 8
               

               
Conread position:
               
618-950
               

               
Cow position:
               
chr27:16965648-16965323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 72
               

               
Conread position:
               
618-957
               

               
Cow position:
               
chr27:16088884-16088527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
108, 97
               

               
Conread position:
               
619-860
               

               
Cow position:
               
chr27:15215307-15215062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 141
               

               
Conread position:
               
620-959
               

               
Cow position:
               
chr27:4944445-4944772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
622-938
               

               
Cow position:
               
chr27:2901195-2901505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
623-831
               

               
Cow position:
               
chr27:26013304-26013510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
99, 92
               

               
Conread position:
               
623-941
               

               
Cow position:
               
chr27:26433740-26434056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
623-943
               

               
Cow position:
               
chr27:23452531-23452218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
624-847
               

               
Cow position:
               
chr27:22225526-22225744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
625-940
               

               
Cow position:
               
chr27:26111841-26112160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
625-959
               

               
Cow position:
               
chr27:20514889-20514564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
627-875
               

               
Cow position:
               
chr27:31017768-31018005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
627-888
               

               
Cow position:
               
chr27:7974240-7973984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
72, 84
               

               
Conread position:
               
628-929
               

               
Cow position:
               
chr27:22489343-22489041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
628-941
               

               
Cow position:
               
chr27:28280248-28279935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
629-941
               

               
Cow position:
               
chr27:29164829-29164532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
629-951
               

               
Cow position:
               
chr27:27405005-27405322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
630-948
               

               
Cow position:
               
chr27:26984412-26984102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
631-874
               

               
Cow position:
               
chr27:23876777-23877023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
631-941
               

               
Cow position:
               
chr27:13869680-13869377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
631-951
               

               
Cow position:
               
chr27:23485276-23484959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
631-957
               

               
Cow position:
               
chr27:23559969-23560290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
631-959
               

               
Cow position:
               
chr27:8062292-8062614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
304, 56
               

               
Conread position:
               
631-959
               

               
Cow position:
               
chr27:18507704-18507386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
99, 50
               

               
Conread position:
               
636-959
               

               
Cow position:
               
chr27:31151434-31151122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
638-959
               

               
Cow position:
               
chr27:15238800-15238480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
643-959
               

               
Cow position:
               
chr27:23860219-23859901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
15, 116
               

               
Conread position:
               
645-927
               

               
Cow position:
               
chr27:23107853-23108131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
78, 112
               

               
Conread position:
               
646-949
               

               
Cow position:
               
chr27:20869645-20869934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
198, 45
               

               
Conread position:
               
646-952
               

               
Cow position:
               
chr27:30885273-30884986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
650-927
               

               
Cow position:
               
chr27:1190432-1190705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
650-948
               

               
Cow position:
               
chr27:26852549-26852832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
650-955
               

               
Cow position:
               
chr27:29593585-29593883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
651-877
               

               
Cow position:
               
chr27:17918273-17918493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
652-860
               

               
Cow position:
               
chr27:20803616-20803823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 65
               

               
Conread position:
               
653-950
               

               
Cow position:
               
chr27:12459321-12459037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
653-951
               

               
Cow position:
               
chr27:18882695-18882402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 186
               

               
Conread position:
               
654-865
               

               
Cow position:
               
chr27:20812950-20812735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
654-921
               

               
Cow position:
               
chr27:29613449-29613714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
654-941
               

               
Cow position:
               
chr27:213003-212708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
654-951
               

               
Cow position:
               
chr27:5553510-5553218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
654-959
               

               
Cow position:
               
chr27:13940520-13940810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
656-941
               

               
Cow position:
               
chr27:23507687-23507407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
656-949
               

               
Cow position:
               
chr27:12425325-12425037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
656-951
               

               
Cow position:
               
chr27:20517696-20517398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
657-941
               

               
Cow position:
               
chr27:26853321-26853594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
658-940
               

               
Cow position:
               
chr27:14303769-14303499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
660-945
               

               
Cow position:
               
chr27:1636902-1637173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 45
               

               
Conread position:
               
661-950
               

               
Cow position:
               
chr27:19933097-19932814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
662-949
               

               
Cow position:
               
chr27:6290503-6290223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
662-950
               

               
Cow position:
               
chr27:10436699-10436980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
664-941
               

               
Cow position:
               
chr27:12564394-12564671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
672-954
               

               
Cow position:
               
chr27:11561797-11561519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
673-917
               

               
Cow position:
               
chr27:2885812-2886053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
673-952
               

               
Cow position:
               
chr27:20584437-20584722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
674-935
               

               
Cow position:
               
chr27:11993845-11994105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
675-957
               

               
Cow position:
               
chr27:7343406-7343687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
676-896
               

               
Cow position:
               
chr27:16230919-16231138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
676-949
               

               
Cow position:
               
chr27:24007487-24007214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
676-949
               

               
Cow position:
               
chr27:27558481-27558751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
677-959
               

               
Cow position:
               
chr27:10599008-10598726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 194
               

               
Conread position:
               
678-944
               

               
Cow position:
               
chr27:19509030-19508766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
179, 203
               

               
Conread position:
               
680-920
               

               
Cow position:
               
chr27:22552869-22553100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
680-941
               

               
Cow position:
               
chr27:5545595-5545337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
680-949
               

               
Cow position:
               
chr27:26437105-26437371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 176
               

               
Conread position:
               
680-958
               

               
Cow position:
               
chr27:11982635-11982907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
681-919
               

               
Cow position:
               
chr27:28478594-28478363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
681-940
               

               
Cow position:
               
chr27:20897011-20897262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
682-955
               

               
Cow position:
               
chr27:31210559-31210292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
259, 20
               

               
Conread position:
               
690-955
               

               
Cow position:
               
chr27:26883257-26883522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
696-941
               

               
Cow position:
               
chr27:20719288-20719042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
696-945
               

               
Cow position:
               
chr27:23994421-23994662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
696-949
               

               
Cow position:
               
chr27:19681951-19681698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
697-951
               

               
Cow position:
               
chr27:17933924-17933668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
700-936
               

               
Cow position:
               
chr27:6106696-6106469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 69
               

               
Conread position:
               
700-941
               

               
Cow position:
               
chr27:20327495-20327254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
701-944
               

               
Cow position:
               
chr27:26793787-26794030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 137
               

               
Conread position:
               
701-951
               

               
Cow position:
               
chr27:30455989-30455740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 179
               

               
Conread position:
               
703-941
               

               
Cow position:
               
chr27:9977678-9977443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
707-949
               

               
Cow position:
               
chr27:31386641-31386882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 150
               

               
Conread position:
               
707-958
               

               
Cow position:
               
chr27:31170074-31170332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 76
               

               
Conread position:
               
709-941
               

               
Cow position:
               
chr27:7304618-7304849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
709-949
               

               
Cow position:
               
chr27:7802059-7801814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 142
               

               
Conread position:
               
710-913
               

               
Cow position:
               
chr27:29603803-29603603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
139, 63
               

               
Conread position:
               
710-942
               

               
Cow position:
               
chr27:6319905-6319678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
710-949
               

               
Cow position:
               
chr27:12658362-12658604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
710-959
               

               
Cow position:
               
chr27:14818220-14817970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 224
               

               
Conread position:
               
711-949
               

               
Cow position:
               
chr27:26245564-26245797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
711-959
               

               
Cow position:
               
chr27:10323822-10323582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
712-945
               

               
Cow position:
               
chr27:27055270-27055049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
712-947
               

               
Cow position:
               
chr27:15002994-15003229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
713-941
               

               
Cow position:
               
chr27:24693395-24693175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
714-941
               

               
Cow position:
               
chr27:27740309-27740536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
714-949
               

               
Cow position:
               
chr27:26121742-26121507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
714-955
               

               
Cow position:
               
chr27:10404134-10404376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
715-949
               

               
Cow position:
               
chr27:30414922-30415154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 174
               

               
Conread position:
               
721-937
               

               
Cow position:
               
chr27:7425214-7425427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
722-939
               

               
Cow position:
               
chr27:18435160-18435371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
725-949
               

               
Cow position:
               
chr27:20653285-20653509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
103, 96
               

               
Conread position:
               
725-951
               

               
Cow position:
               
chr27:11323300-11323073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
215, 0
               

               
Conread position:
               
726-959
               

               
Cow position:
               
chr27:20486027-20485782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
728-951
               

               
Cow position:
               
chr27:6330611-6330381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
728-960
               

               
Cow position:
               
chr27:3518472-3518240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
113, 125
               

               
Conread position:
               
729-950
               

               
Cow position:
               
chr27:27648351-27648566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
730-951
               

               
Cow position:
               
chr27:20612486-20612267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
731-935
               

               
Cow position:
               
chr27:26323412-26323205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
732-949
               

               
Cow position:
               
chr27:24223915-24223703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
735-937
               

               
Cow position:
               
chr27:31248653-31248845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
738-959
               

               
Cow position:
               
chr27:18791552-18791775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
740-942
               

               
Cow position:
               
chr27:13204414-13204221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
740-951
               

               
Cow position:
               
chr27:29614997-29614789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
740-952
               

               
Cow position:
               
chr27:19576368-19576578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
183, 117
               

               
Conread position:
               
741-941
               

               
Cow position:
               
chr27:15237767-15237568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
742-941
               

               
Cow position:
               
chr27:26118453-26118254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
743-939
               

               
Cow position:
               
chr27:20325095-20324898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
747-919
               

               
Cow position:
               
chr27:24709505-24709333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
756-929
               

               
Cow position:
               
chr27:26909652-26909819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
757-955
               

               
Cow position:
               
chr27:20266287-20266484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
192, 148
               

               
Conread position:
               
772-959
               

               
Cow position:
               
chr27:21419267-21419445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
162, 78
               

               
Conread position:
               
773-929
               

               
Cow position:
               
chr27:232476-232320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
773-929
               

               
Cow position:
               
chr27:23177390-23177543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
773-929
               

               
Cow position:
               
chr27:29160059-29160215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
773-941
               

               
Cow position:
               
chr27:26984084-26983920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
773-949
               

               
Cow position:
               
chr27:24303869-24303692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
100, 136
               

               
Conread position:
               
773-950
               

               
Cow position:
               
chr27:17908337-17908510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
167, 35
               

               
Conread position:
               
773-950
               

               
Cow position:
               
chr27:30444758-30444926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
773-959
               

               
Cow position:
               
chr27:21202115-21201929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
774-923
               

               
Cow position:
               
chr27:23060192-23060341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
774-929
               

               
Cow position:
               
chr27:30996907-30997060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
774-930
               

               
Cow position:
               
chr27:23477867-23477716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
774-937
               

               
Cow position:
               
chr27:21951057-21951219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 83
               

               
Conread position:
               
774-941
               

               
Cow position:
               
chr27:178784-178620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
774-941
               

               
Cow position:
               
chr27:26087237-26087077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
774-941
               

               
Cow position:
               
chr27:26400800-26400960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
774-941
               

               
Cow position:
               
chr27:31183497-31183330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
85, 155
               

               
Conread position:
               
774-949
               

               
Cow position:
               
chr27:13801733-13801554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
102, 139
               

               
Conread position:
               
774-951
               

               
Cow position:
               
chr27:20081207-20081383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
774-952
               

               
Cow position:
               
chr27:30702117-30701941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
774-954
               

               
Cow position:
               
chr27:26980041-26980221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
124, 135
               

               
Conread position:
               
774-956
               

               
Cow position:
               
chr27:27449964-27450140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
774-960
               

               
Cow position:
               
chr27:24240280-24240085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
774-960
               

               
Cow position:
               
chr27:26236247-26236068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
775-949
               

               
Cow position:
               
chr27:672588-672413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
775-950
               

               
Cow position:
               
chr27:19557308-19557143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
775-955
               

               
Cow position:
               
chr27:10581453-10581275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
157, 25
               

               
Conread position:
               
775-959
               

               
Cow position:
               
chr27:18873968-18873791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
165, 86
               

               
Conread position:
               
775-959
               

               
Cow position:
               
chr27:22583667-22583477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
775-959
               

               
Cow position:
               
chr27:28015812-28015997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 77
               

               
Conread position:
               
775-960
               

               
Cow position:
               
chr27:19452922-19452737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
775-960
               

               
Cow position:
               
chr27:23232836-23232651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 165
               

               
Conread position:
               
776-958
               

               
Cow position:
               
chr27:22748247-22748068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-951
               

               
Cow position:
               
chr27:4486858-4487033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
780-951
               

               
Cow position:
               
chr27:29183301-29183479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
780-955
               

               
Cow position:
               
chr27:28254153-28253977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
159, 24
               

               
Conread position:
               
780-956
               

               
Cow position:
               
chr27:12947879-12948055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
780-956
               

               
Cow position:
               
chr27:25000045-25000227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
780-957
               

               
Cow position:
               
chr27:19779792-19779618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
781-930
               

               
Cow position:
               
chr27:26317980-26317834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
781-941
               

               
Cow position:
               
chr27:11208640-11208800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
781-947
               

               
Cow position:
               
chr27:31157726-31157562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
781-951
               

               
Cow position:
               
chr27:31498697-31498527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
782-926
               

               
Cow position:
               
chr27:26625122-26624979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
782-940
               

               
Cow position:
               
chr27:29249505-29249344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
782-945
               

               
Cow position:
               
chr27:9956518-9956681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
782-947
               

               
Cow position:
               
chr27:19074109-19074272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
782-950
               

               
Cow position:
               
chr27:9504469-9504301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
782-950
               

               
Cow position:
               
chr27:23760068-23760229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
782-951
               

               
Cow position:
               
chr27:19805783-19805949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
782-959
               

               
Cow position:
               
chr27:29308260-29308081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
782-960
               

               
Cow position:
               
chr27:18813626-18813807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
783-959
               

               
Cow position:
               
chr27:11133999-11133825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
166, 74
               

               
Conread position:
               
783-959
               

               
Cow position:
               
chr27:11349192-11349022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
162, 69
               

               
Conread position:
               
784-948
               

               
Cow position:
               
chr27:20048545-20048386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
156, 75
               

               
Conread position:
               
784-960
               

               
Cow position:
               
chr27:18688498-18688670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
785-959
               

               
Cow position:
               
chr27:29877563-29877738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
787-930
               

               
Cow position:
               
chr27:26314215-26314357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
787-950
               

               
Cow position:
               
chr27:21101382-21101544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
788-956
               

               
Cow position:
               
chr27:21054367-21054199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
790-949
               

               
Cow position:
               
chr27:13181810-13181653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
790-955
               

               
Cow position:
               
chr27:22150789-22150950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
791-941
               

               
Cow position:
               
chr27:26939981-26939835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
791-956
               

               
Cow position:
               
chr27:3698768-3698934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
153, 84
               

               
Conread position:
               
792-945
               

               
Cow position:
               
chr27:27012602-27012448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
795-945
               

               
Cow position:
               
chr27:26467658-26467808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
795-949
               

               
Cow position:
               
chr27:30441605-30441451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
799-958
               

               
Cow position:
               
chr27:24952058-24952213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
146, 67
               

               
Conread position:
               
802-949
               

               
Cow position:
               
chr27:19653678-19653828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
811-949
               

               
Cow position:
               
chr27:29458216-29458079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
817-945
               

               
Cow position:
               
chr27:14472296-14472424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
866-959
               

               
Cow position:
               
chr27:19741559-19741655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               
Show alignments to all cow chromosomes.