Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8024G20.5 |
| Conread position: | 4-340 |
| Cow position: | chr11:53682090-53681764 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 162, 55 |
| Conread position: | 9-336 |
| Cow position: | chr11:24336521-24336845 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 10-197 |
| Cow position: | chr11:2905968-2906156 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 151, 48 |
| Conread position: | 30-340 |
| Cow position: | chr11:81322316-81322617 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 151, 27 |
| Conread position: | 253-548 |
| Cow position: | chr11:67435385-67435685 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 330-548 |
| Cow position: | chr11:68512542-68512770 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 333-571 |
| Cow position: | chr11:37439138-37438889 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 333-589 |
| Cow position: | chr11:52739945-52740215 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 20, 258 |
| Conread position: | 349-505 |
| Cow position: | chr11:39427238-39427395 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 349-538 |
| Cow position: | chr11:85207950-85208147 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 65, 7 |
| Conread position: | 349-570 |
| Cow position: | chr11:70194918-70195147 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 68, 188 |
| Conread position: | 349-571 |
| Cow position: | chr11:4883518-4883748 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 7 |
| Conread position: | 349-571 |
| Cow position: | chr11:10809074-10809307 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 349-580 |
| Cow position: | chr11:9714952-9715193 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 349-580 |
| Cow position: | chr11:35232000-35231767 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 7 |
| Conread position: | 349-581 |
| Cow position: | chr11:41322589-41322830 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 65, 6 |
| Conread position: | 351-544 |
| Cow position: | chr11:15249656-15249855 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 353-581 |
| Cow position: | chr11:79169179-79169421 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 53, 219 |
| Conread position: | 354-580 |
| Cow position: | chr11:67254140-67253901 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 356-460 |
| Cow position: | chr11:3280140-3280035 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 356-571 |
| Cow position: | chr11:62870992-62871216 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 356-668 |
| Cow position: | chr11:36452726-36453050 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 56, 184 |
| Conread position: | 357-548 |
| Cow position: | chr11:71303155-71302955 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 358-562 |
| Cow position: | chr11:9166833-9167049 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 358-580 |
| Cow position: | chr11:19706116-19705892 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 358-584 |
| Cow position: | chr11:44529237-44529004 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 162 |
| Conread position: | 359-580 |
| Cow position: | chr11:11091778-11092007 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 111, 154 |
| Conread position: | 361-564 |
| Cow position: | chr11:16685559-16685352 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 75 |
| Conread position: | 407-571 |
| Cow position: | chr11:9151558-9151731 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 94 |
Show alignments to all cow chromosomes.