Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8024G20.5 |
| Conread position: | 4-340 |
| Cow position: | chr13:47682260-47681933 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 200, 79 |
| Conread position: | 161-365 |
| Cow position: | chr13:18396209-18396418 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 66, 195 |
| Conread position: | 307-581 |
| Cow position: | chr13:54243034-54243308 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 110, 42 |
| Conread position: | 342-574 |
| Cow position: | chr13:59654764-59654527 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 349-564 |
| Cow position: | chr13:21723185-21722964 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 349-566 |
| Cow position: | chr13:23151771-23151546 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 349-568 |
| Cow position: | chr13:39268757-39268520 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 7 |
| Conread position: | 349-570 |
| Cow position: | chr13:38625468-38625234 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 349-581 |
| Cow position: | chr13:28341750-28341993 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 62, 7 |
| Conread position: | 349-581 |
| Cow position: | chr13:44426544-44426781 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 65, 7 |
| Conread position: | 349-591 |
| Cow position: | chr13:46462890-46462639 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 352-576 |
| Cow position: | chr13:41566922-41567153 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 354-571 |
| Cow position: | chr13:571083-570855 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 355-571 |
| Cow position: | chr13:41482063-41482288 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 358-622 |
| Cow position: | chr13:12906353-12906078 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 159 |
| Conread position: | 361-580 |
| Cow position: | chr13:34016857-34017083 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 365-581 |
| Cow position: | chr13:21587786-21587565 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 113 |
| Conread position: | 370-548 |
| Cow position: | chr13:34094672-34094859 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.