Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8024G20.5 |
| Conread position: | 11-332 |
| Cow position: | chr18:37527655-37527349 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 150, 36 |
| Conread position: | 12-343 |
| Cow position: | chr18:37558001-37557679 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 144, 47 |
| Conread position: | 12-347 |
| Cow position: | chr18:16666027-16666366 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 17-336 |
| Cow position: | chr18:20693112-20693432 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 58-347 |
| Cow position: | chr18:20800141-20800432 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 103, 32 |
| Conread position: | 104-352 |
| Cow position: | chr18:35591219-35591470 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 97 |
| Conread position: | 232-620 |
| Cow position: | chr18:51247345-51246957 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 48 |
| Conread position: | 329-579 |
| Cow position: | chr18:1658977-1659237 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 120 |
| Conread position: | 332-580 |
| Cow position: | chr18:44025039-44024785 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 333-587 |
| Cow position: | chr18:35879180-35879445 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 15, 239 |
| Conread position: | 342-542 |
| Cow position: | chr18:22482239-22482031 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 5 |
| Conread position: | 343-570 |
| Cow position: | chr18:51309477-51309239 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 349-545 |
| Cow position: | chr18:21236851-21237058 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 349-635 |
| Cow position: | chr18:11731977-11731689 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 6 |
| Conread position: | 356-571 |
| Cow position: | chr18:252544-252314 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 356-588 |
| Cow position: | chr18:13827790-13827566 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 361-580 |
| Cow position: | chr18:39812082-39812311 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 157 |
| Conread position: | 365-538 |
| Cow position: | chr18:35883860-35884042 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 375-548 |
| Cow position: | chr18:12479249-12479424 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 375-581 |
| Cow position: | chr18:34574983-34575190 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 433-580 |
| Cow position: | chr18:14423754-14423595 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.