Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8024G20.5
        

               Conread position:
               11-347
               

               Cow position:
               chr20:2399649-2399310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               330-579
               

               Cow position:
               chr20:36869744-36869491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               337-570
               

               Cow position:
               chr20:34362809-34362566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 210
               

               Conread position:
               349-571
               

               Cow position:
               chr20:8653690-8653457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               65, 7
               

               Conread position:
               349-571
               

               Cow position:
               chr20:22446193-22446422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               64, 7
               

               Conread position:
               349-581
               

               Cow position:
               chr20:13644284-13644525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 7
               

               Conread position:
               354-570
               

               Cow position:
               chr20:11888479-11888705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               60, 99
               

               Conread position:
               356-548
               

               Cow position:
               chr20:9333017-9333214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               361-571
               

               Cow position:
               chr20:4243550-4243330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               364-581
               

               Cow position:
               chr20:19261065-19261292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               104, 0
               
Show alignments to all cow chromosomes.