Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8024G20.5
        

               Conread position:
               64-339
               

               Cow position:
               chr25:33050055-33050330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               155, 39
               

               Conread position:
               298-558
               

               Cow position:
               chr25:3895380-3895118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               116, 11
               

               Conread position:
               334-579
               

               Cow position:
               chr25:14012116-14011861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               136, 8
               

               Conread position:
               343-570
               

               Cow position:
               chr25:2610888-2610652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               71, 5
               

               Conread position:
               349-548
               

               Cow position:
               chr25:13241858-13241655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               349-624
               

               Cow position:
               chr25:17338972-17339245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               121, 8
               

               Conread position:
               351-570
               

               Cow position:
               chr25:27977568-27977800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               352-463
               

               Cow position:
               chr25:21414217-21414330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               352-568
               

               Cow position:
               chr25:33459336-33459568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 84
               

               Conread position:
               355-580
               

               Cow position:
               chr25:20369354-20369119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               361-548
               

               Cow position:
               chr25:25731786-25731592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               53, 164
               

               Conread position:
               366-575
               

               Cow position:
               chr25:34414211-34413996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 36
               
Show alignments to all cow chromosomes.