Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8024G20.5 |
| Conread position: | 11-272 |
| Cow position: | chr9:17037519-17037253 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 5 |
| Conread position: | 23-336 |
| Cow position: | chr9:39719148-39719461 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 130, 24 |
| Conread position: | 58-315 |
| Cow position: | chr9:24924089-24923832 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 58-340 |
| Cow position: | chr9:28696279-28695992 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 111, 46 |
| Conread position: | 101-343 |
| Cow position: | chr9:9464468-9464714 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 78 |
| Conread position: | 253-639 |
| Cow position: | chr9:17037250-17036821 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 315-579 |
| Cow position: | chr9:32985777-32985511 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 323-580 |
| Cow position: | chr9:60821776-60821516 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 331-571 |
| Cow position: | chr9:48056549-48056318 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 333-554 |
| Cow position: | chr9:51760526-51760299 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 81, 18 |
| Conread position: | 333-571 |
| Cow position: | chr9:18326952-18327188 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 5 |
| Conread position: | 349-571 |
| Cow position: | chr9:34726322-34726097 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 7 |
| Conread position: | 351-546 |
| Cow position: | chr9:18855765-18855966 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 354-571 |
| Cow position: | chr9:6358499-6358729 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 354-581 |
| Cow position: | chr9:50062572-50062807 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 356-560 |
| Cow position: | chr9:49034310-49034102 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 106, 188 |
| Conread position: | 356-571 |
| Cow position: | chr9:26190023-26189804 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 361-609 |
| Cow position: | chr9:33071235-33070981 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 363-571 |
| Cow position: | chr9:48796803-48797021 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 52, 42 |
| Conread position: | 365-568 |
| Cow position: | chr9:56264889-56265102 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 133 |
| Conread position: | 372-581 |
| Cow position: | chr9:35027932-35027719 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 397-588 |
| Cow position: | chr9:63074827-63075028 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 398-579 |
| Cow position: | chr9:51305310-51305499 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 632-775 |
| Cow position: | chr9:17035834-17035696 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
Show alignments to all cow chromosomes.