Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8024G20.5 |
| Conread position: | 1-338 |
| Cow position: | chrX:27390412-27390746 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 161, 63 |
| Conread position: | 4-337 |
| Cow position: | chrX:24562598-24562930 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 157, 53 |
| Conread position: | 11-332 |
| Cow position: | chrX:24232422-24232749 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 11-352 |
| Cow position: | chrX:10991314-10990981 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 150, 39 |
| Conread position: | 99-339 |
| Cow position: | chrX:25173512-25173264 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 99-360 |
| Cow position: | chrX:20506223-20505956 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 173 |
| Conread position: | 101-391 |
| Cow position: | chrX:13851598-13851300 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 163 |
| Conread position: | 102-340 |
| Cow position: | chrX:24523436-24523207 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 131-336 |
| Cow position: | chrX:27621549-27621757 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 333-621 |
| Cow position: | chrX:8108068-8107764 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 349-548 |
| Cow position: | chrX:24129588-24129380 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 349-580 |
| Cow position: | chrX:6026416-6026657 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 7 |
| Conread position: | 351-530 |
| Cow position: | chrX:12869131-12869323 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 356-580 |
| Cow position: | chrX:25450129-25449898 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 40, 146 |
| Conread position: | 356-581 |
| Cow position: | chrX:32003145-32003379 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 158 |
| Conread position: | 357-580 |
| Cow position: | chrX:1430303-1430075 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 357-624 |
| Cow position: | chrX:3952129-3951861 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 358-570 |
| Cow position: | chrX:38569757-38569536 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 161 |
| Conread position: | 366-569 |
| Cow position: | chrX:36086165-36085958 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 367-581 |
| Cow position: | chrX:27646458-27646232 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 37, 217 |
| Conread position: | 374-570 |
| Cow position: | chrX:25280567-25280771 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 375-547 |
| Cow position: | chrX:17066620-17066801 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 166 |
| Conread position: | 375-556 |
| Cow position: | chrX:21973194-21973010 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 39, 125 |
| Conread position: | 375-581 |
| Cow position: | chrX:26879625-26879409 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.