Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8024I01.5
        

               Conread position:
               1-100
               

               Cow position:
               chr27:12670328-12670229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               101-326
               

               Cow position:
               chr27:12663690-12663465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-526
               

               Cow position:
               chr27:12660304-12660174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               123
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               583-653
               

               Cow position:
               chr27:12659959-12659889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               71
               

               Alignm identity:
               69
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               645-797
               

               Cow position:
               chr27:12657518-12657366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               142
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               798-878
               

               Cow position:
               chr27:12655540-12655460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               76
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               877-1689
               

               Cow position:
               chr27:12653894-12653069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               846
               

               Alignm identity:
               704
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 61
               
Show alignments to all cow chromosomes.