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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8024N04.3
        

               
Conread position:
               
112-317
               

               
Cow position:
               
chr14:12858729-12858525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
112-343
               

               
Cow position:
               
chr14:9811589-9811818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
112-344
               

               
Cow position:
               
chr14:8884974-8884747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
112-353
               

               
Cow position:
               
chr14:446361-446138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr14:44076776-44076605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
153, 29
               

               
Conread position:
               
113-298
               

               
Cow position:
               
chr14:19419003-19419187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-298
               

               
Cow position:
               
chr14:24797781-24797597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-319
               

               
Cow position:
               
chr14:12545577-12545782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
113-329
               

               
Cow position:
               
chr14:9449623-9449407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-337
               

               
Cow position:
               
chr14:19489890-19490115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
153, 30
               

               
Conread position:
               
113-337
               

               
Cow position:
               
chr14:41220139-41219916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-339
               

               
Cow position:
               
chr14:38405891-38406118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
113-339
               

               
Cow position:
               
chr14:45848066-45848290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr14:28350789-28350561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr14:31155735-31155962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:5645315-5645546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:8925005-8925234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:13104850-13105079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:13370134-13370363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:19317748-19317978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:19523961-19524190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:26129273-26129042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:28116970-28117195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 18
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:31881979-31881751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:32500081-32500299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:34168207-34168436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:34763638-34763867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:37443877-37444106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:38238187-38237958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:38651820-38652049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:40483553-40483324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:48572445-48572216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr14:4916878-4916648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr14:8517422-8517648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr14:17762479-17762249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr14:31736888-31737118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr14:34370443-34370671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr14:38047089-38047315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr14:50137178-50137407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr14:8998523-8998780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 165
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr14:10310468-10310735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
151, 17
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr14:11474412-11474151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr14:13560073-13560319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr14:13581778-13582042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
154, 22
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr14:30476434-30476168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
155, 17
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr14:34906434-34906701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr14:44293528-44293793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
233, 17
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr14:45299838-45300098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
115-318
               

               
Cow position:
               
chr14:9876371-9876172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
115-337
               

               
Cow position:
               
chr14:21534046-21534266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
115-343
               

               
Cow position:
               
chr14:34354461-34354688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
115-343
               

               
Cow position:
               
chr14:45583224-45583448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr14:24836717-24836949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 209
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr14:47938197-47937971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
115-354
               

               
Cow position:
               
chr14:47645338-47645575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
115-364
               

               
Cow position:
               
chr14:24990369-24990123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
115-374
               

               
Cow position:
               
chr14:13811125-13810872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
116-319
               

               
Cow position:
               
chr14:44554754-44554954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
116-343
               

               
Cow position:
               
chr14:42849690-42849464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
116-361
               

               
Cow position:
               
chr14:21200833-21201080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
118-372
               

               
Cow position:
               
chr14:33713897-33714142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
118-374
               

               
Cow position:
               
chr14:50142112-50141858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
150, 228
               

               
Conread position:
               
119-377
               

               
Cow position:
               
chr14:32471990-32471726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
121-361
               

               
Cow position:
               
chr14:48495155-48495393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
121-364
               

               
Cow position:
               
chr14:26449604-26449368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
146, 22
               

               
Conread position:
               
121-390
               

               
Cow position:
               
chr14:26496854-26496584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
122-398
               

               
Cow position:
               
chr14:3438261-3437982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
123-329
               

               
Cow position:
               
chr14:105593-105794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
123-364
               

               
Cow position:
               
chr14:39822162-39821927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
143, 20
               

               
Conread position:
               
124-343
               

               
Cow position:
               
chr14:17650877-17651093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
125-344
               

               
Cow position:
               
chr14:32449875-32450095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
125-377
               

               
Cow position:
               
chr14:5532259-5532514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
140, 128
               

               
Conread position:
               
126-377
               

               
Cow position:
               
chr14:35419787-35420036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
140, 222
               

               
Conread position:
               
127-343
               

               
Cow position:
               
chr14:11462159-11461942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
127-344
               

               
Cow position:
               
chr14:8396859-8396641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
127-377
               

               
Cow position:
               
chr14:13769374-13769120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
141, 81
               

               
Conread position:
               
127-389
               

               
Cow position:
               
chr14:33835085-33834832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
128-318
               

               
Cow position:
               
chr14:31400566-31400375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
130-344
               

               
Cow position:
               
chr14:403088-403304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
130-351
               

               
Cow position:
               
chr14:2298018-2298231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
131-377
               

               
Cow position:
               
chr14:7475782-7476032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
137, 49
               

               
Conread position:
               
136-337
               

               
Cow position:
               
chr14:35497448-35497651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
137-343
               

               
Cow position:
               
chr14:34629264-34629057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
137-344
               

               
Cow position:
               
chr14:13276013-13276217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
137-353
               

               
Cow position:
               
chr14:21727954-21728173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 112
               

               
Conread position:
               
139-274
               

               
Cow position:
               
chr14:16916794-16916658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-305
               

               
Cow position:
               
chr14:48828156-48828324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
55, 76
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr14:193082-193287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr14:2289186-2289385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
126, 66
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr14:14786383-14786179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 39
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr14:29044740-29044535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr14:47873191-47872986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr14:1727079-1727283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr14:5379092-5379296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 102
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr14:11150983-11150777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr14:12903267-12903472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 91
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr14:13860608-13860397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr14:17488406-17488200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr14:24895604-24895810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr14:38016483-38016689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-358
               

               
Cow position:
               
chr14:424118-424335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
139-364
               

               
Cow position:
               
chr14:30665001-30664775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
127, 132
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr14:23254405-23254177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr14:25363502-25363271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr14:38435964-38436190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr14:12833783-12834026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr14:15272332-15272089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr14:20786317-20786558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
126, 108
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr14:22026842-22026602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr14:27040454-27040210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr14:28993415-28993177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 155
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr14:34667918-34667674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr14:34675031-34675274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr14:49995612-49995370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr14:50069265-50069022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
140-303
               

               
Cow position:
               
chr14:37335042-37334879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
125, 90
               

               
Conread position:
               
140-318
               

               
Cow position:
               
chr14:1661370-1661548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr14:1867426-1867590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
126, 49
               

               
Conread position:
               
140-338
               

               
Cow position:
               
chr14:36109892-36109703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 40
               

               
Conread position:
               
140-338
               

               
Cow position:
               
chr14:43564392-43564589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 62
               

               
Conread position:
               
140-339
               

               
Cow position:
               
chr14:37677315-37677514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
94, 111
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr14:9482885-9483085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
125, 133
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr14:23259992-23259784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr14:33772909-33773110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr14:34394667-34394870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
126, 195
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr14:40720803-40721011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr14:46225114-46225317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr14:7647048-7647254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr14:12483335-12483537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
126, 101
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr14:24922720-24922922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
140-364
               

               
Cow position:
               
chr14:8495989-8495766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr14:12740115-12739873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr14:13308664-13308907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr14:32584095-32583859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
141-342
               

               
Cow position:
               
chr14:46752651-46752448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
140, 99
               

               
Conread position:
               
141-343
               

               
Cow position:
               
chr14:37136744-37136947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 43
               

               
Conread position:
               
141-374
               

               
Cow position:
               
chr14:10349926-10349696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
124, 210
               

               
Conread position:
               
141-377
               

               
Cow position:
               
chr14:8102743-8102505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr14:38380248-38380038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
145-329
               

               
Cow position:
               
chr14:38241644-38241456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
5, 112
               

               
Conread position:
               
145-338
               

               
Cow position:
               
chr14:35710987-35711183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
146-339
               

               
Cow position:
               
chr14:35604024-35604217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 38
               

               
Conread position:
               
146-343
               

               
Cow position:
               
chr14:42259404-42259599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 88
               

               
Conread position:
               
147-360
               

               
Cow position:
               
chr14:30663098-30662884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 188
               

               
Conread position:
               
148-342
               

               
Cow position:
               
chr14:37332460-37332265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
148-344
               

               
Cow position:
               
chr14:17771231-17771037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
148-348
               

               
Cow position:
               
chr14:14420461-14420262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
149-345
               

               
Cow position:
               
chr14:12951059-12951259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
150-293
               

               
Cow position:
               
chr14:21540975-21540831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
151-344
               

               
Cow position:
               
chr14:46084951-46085144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
152-344
               

               
Cow position:
               
chr14:23215147-23215339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
152-362
               

               
Cow position:
               
chr14:37882944-37883153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
114, 78
               

               
Conread position:
               
154-339
               

               
Cow position:
               
chr14:40229665-40229851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
155-299
               

               
Cow position:
               
chr14:28211902-28212047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-308
               

               
Cow position:
               
chr14:45066911-45067063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 46
               

               
Conread position:
               
155-319
               

               
Cow position:
               
chr14:48360929-48360772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
155-339
               

               
Cow position:
               
chr14:12613174-12613360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
155-341
               

               
Cow position:
               
chr14:14271306-14271492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
155-342
               

               
Cow position:
               
chr14:28497093-28496898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 154
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr14:15336684-15336495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr14:22612753-22612564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr14:24973676-24973487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr14:40969104-40969293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr14:44367626-44367815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr14:46125496-46125685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr14:46489301-46489492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr14:46849097-46848908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr14:1802151-1802335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr14:5113192-5113002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr14:20467084-20467272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 79
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr14:21765148-21765338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr14:22689947-22689756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr14:38459205-38459017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
110, 8
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr14:41081694-41081503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr14:43561145-43561331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 118
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr14:45278138-45278328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr14:46967318-46967134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 8
               

               
Conread position:
               
155-345
               

               
Cow position:
               
chr14:7812615-7812799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
155-349
               

               
Cow position:
               
chr14:9538070-9538264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 192
               

               
Conread position:
               
155-372
               

               
Cow position:
               
chr14:9108797-9108593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 20
               

               
Conread position:
               
155-372
               

               
Cow position:
               
chr14:30738598-30738817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 193
               

               
Conread position:
               
155-372
               

               
Cow position:
               
chr14:40346208-40346423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
111, 192
               

               
Conread position:
               
155-372
               

               
Cow position:
               
chr14:44382228-44382441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr14:17690077-17690297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
110, 77
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr14:24980496-24980723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr14:42626726-42626503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr14:44026867-44026640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr14:46302854-46303081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-389
               

               
Cow position:
               
chr14:50121974-50122202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
86, 94
               

               
Conread position:
               
156-339
               

               
Cow position:
               
chr14:5500878-5501061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
110, 78
               

               
Conread position:
               
156-339
               

               
Cow position:
               
chr14:40475771-40475592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
110, 44
               

               
Conread position:
               
156-343
               

               
Cow position:
               
chr14:17610763-17610949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
156-343
               

               
Cow position:
               
chr14:31289808-31289996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
156-344
               

               
Cow position:
               
chr14:44692099-44692288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
156-348
               

               
Cow position:
               
chr14:32580227-32580421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 154
               

               
Conread position:
               
156-364
               

               
Cow position:
               
chr14:29897971-29898183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
156-375
               

               
Cow position:
               
chr14:25430601-25430816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
156-389
               

               
Cow position:
               
chr14:18496929-18497162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
157-420
               

               
Cow position:
               
chr14:35588634-35588900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
109, 259
               

               
Conread position:
               
158-342
               

               
Cow position:
               
chr14:32277566-32277381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
158-343
               

               
Cow position:
               
chr14:34124180-34124358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
158-344
               

               
Cow position:
               
chr14:12243431-12243617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
158-344
               

               
Cow position:
               
chr14:41212118-41211931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
159-339
               

               
Cow position:
               
chr14:47584831-47585012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 131
               

               
Conread position:
               
159-340
               

               
Cow position:
               
chr14:41488777-41488598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
159-418
               

               
Cow position:
               
chr14:35355254-35354993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
160-377
               

               
Cow position:
               
chr14:28796633-28796411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
160-716
               

               
Cow position:
               
chr14:44772882-44772322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
161-343
               

               
Cow position:
               
chr14:38150077-38150262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
162-372
               

               
Cow position:
               
chr14:21390421-21390212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
165-377
               

               
Cow position:
               
chr14:48251495-48251280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
100, 122
               

               
Conread position:
               
168-344
               

               
Cow position:
               
chr14:9744683-9744508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
171-344
               

               
Cow position:
               
chr14:13619480-13619307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
175-338
               

               
Cow position:
               
chr14:39433326-39433490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
175-377
               

               
Cow position:
               
chr14:33665793-33666001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
181-343
               

               
Cow position:
               
chr14:13386308-13386145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
184-344
               

               
Cow position:
               
chr14:49063218-49063379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
184-349
               

               
Cow position:
               
chr14:4992181-4992022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
190-377
               

               
Cow position:
               
chr14:39773941-39774132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
191-343
               

               
Cow position:
               
chr14:38143209-38143359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
194-338
               

               
Cow position:
               
chr14:35382511-35382366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
194-344
               

               
Cow position:
               
chr14:2171666-2171817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
196-378
               

               
Cow position:
               
chr14:28138487-28138300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
211-342
               

               
Cow position:
               
chr14:46224566-46224434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
213-339
               

               
Cow position:
               
chr14:23813962-23813836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
220-344
               

               
Cow position:
               
chr14:25886563-25886438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
381-508
               

               
Cow position:
               
chr14:33714005-33714132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
482-875
               

               
Cow position:
               
chr14:24237168-24236767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
486-903
               

               
Cow position:
               
chr14:9837552-9837978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
156, 88
               

               
Conread position:
               
494-789
               

               
Cow position:
               
chr14:7270677-7270968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
501-847
               

               
Cow position:
               
chr14:28796009-28795648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
502-731
               

               
Cow position:
               
chr14:12483980-12484203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
507-845
               

               
Cow position:
               
chr14:106249-106589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
509-938
               

               
Cow position:
               
chr14:9020349-9019903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
516-892
               

               
Cow position:
               
chr14:25779412-25779029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
516-943
               

               
Cow position:
               
chr14:15990513-15990101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
518-785
               

               
Cow position:
               
chr14:21964434-21964160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
518-845
               

               
Cow position:
               
chr14:26442022-26442362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
519-821
               

               
Cow position:
               
chr14:31734537-31734852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 116
               

               
Conread position:
               
520-815
               

               
Cow position:
               
chr14:33326080-33326386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
520-818
               

               
Cow position:
               
chr14:20666710-20667013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
520-846
               

               
Cow position:
               
chr14:2875335-2875000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
524-734
               

               
Cow position:
               
chr14:27848511-27848294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
48, 196
               

               
Conread position:
               
524-776
               

               
Cow position:
               
chr14:48400078-48399829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
524-789
               

               
Cow position:
               
chr14:24992123-24991857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 86
               

               
Conread position:
               
524-828
               

               
Cow position:
               
chr14:43046455-43046150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
524-850
               

               
Cow position:
               
chr14:27791841-27791517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 204
               

               
Conread position:
               
524-875
               

               
Cow position:
               
chr14:25403633-25403992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
524-897
               

               
Cow position:
               
chr14:41749453-41749828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
524-934
               

               
Cow position:
               
chr14:34082845-34083283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
524-936
               

               
Cow position:
               
chr14:7647727-7648137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
524-941
               

               
Cow position:
               
chr14:40034280-40033884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
525-724
               

               
Cow position:
               
chr14:38406615-38406813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
526-683
               

               
Cow position:
               
chr14:28605485-28605320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
526-727
               

               
Cow position:
               
chr14:35607145-35607357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
526-731
               

               
Cow position:
               
chr14:39519004-39518791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
526-761
               

               
Cow position:
               
chr14:15033065-15032830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
526-785
               

               
Cow position:
               
chr14:27312733-27312462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
526-789
               

               
Cow position:
               
chr14:14280726-14280446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
526-789
               

               
Cow position:
               
chr14:19222188-19221913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
526-815
               

               
Cow position:
               
chr14:33538620-33538927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
526-815
               

               
Cow position:
               
chr14:43452871-43453171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
526-821
               

               
Cow position:
               
chr14:7558123-7558438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
526-843
               

               
Cow position:
               
chr14:46178301-46177970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 208
               

               
Conread position:
               
526-845
               

               
Cow position:
               
chr14:18484932-18485275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 264
               

               
Conread position:
               
526-845
               

               
Cow position:
               
chr14:40269537-40269863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
49, 201
               

               
Conread position:
               
526-845
               

               
Cow position:
               
chr14:48250847-48250514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 235
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr14:22583447-22583125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 117
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr14:48427385-48427047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 310
               

               
Conread position:
               
526-851
               

               
Cow position:
               
chr14:18940995-18941313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
526-852
               

               
Cow position:
               
chr14:28378673-28378330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 104
               

               
Conread position:
               
526-888
               

               
Cow position:
               
chr14:1868098-1868453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr14:8540907-8541282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
526-893
               

               
Cow position:
               
chr14:18345422-18345804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
47, 300
               

               
Conread position:
               
526-912
               

               
Cow position:
               
chr14:23107635-23107229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
526-921
               

               
Cow position:
               
chr14:15054679-15055092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
79, 379
               

               
Conread position:
               
526-923
               

               
Cow position:
               
chr14:42330663-42330250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
44, 225
               

               
Conread position:
               
526-925
               

               
Cow position:
               
chr14:18238448-18238055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
49, 188
               

               
Conread position:
               
526-930
               

               
Cow position:
               
chr14:43565593-43565990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
76, 203
               

               
Conread position:
               
526-935
               

               
Cow position:
               
chr14:8488493-8488080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
526-936
               

               
Cow position:
               
chr14:6789678-6789268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 58
               

               
Conread position:
               
526-937
               

               
Cow position:
               
chr14:43032113-43031678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
526-938
               

               
Cow position:
               
chr14:2189957-2189516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
526-938
               

               
Cow position:
               
chr14:5630472-5630030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 276
               

               
Conread position:
               
526-938
               

               
Cow position:
               
chr14:18904299-18904726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 195
               

               
Conread position:
               
526-938
               

               
Cow position:
               
chr14:26108949-26108514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
526-938
               

               
Cow position:
               
chr14:44860932-44861351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
49, 128
               

               
Conread position:
               
526-939
               

               
Cow position:
               
chr14:25385583-25386006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
526-940
               

               
Cow position:
               
chr14:18309001-18309440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
527-846
               

               
Cow position:
               
chr14:40737369-40737684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
527-889
               

               
Cow position:
               
chr14:31785281-31784898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
527-920
               

               
Cow position:
               
chr14:30662295-30661895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
527-938
               

               
Cow position:
               
chr14:47027069-47027491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
528-938
               

               
Cow position:
               
chr14:38355490-38355070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
528-939
               

               
Cow position:
               
chr14:25231342-25231755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
529-723
               

               
Cow position:
               
chr14:34020996-34020793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 199
               

               
Conread position:
               
529-892
               

               
Cow position:
               
chr14:14317172-14316815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
530-730
               

               
Cow position:
               
chr14:11641270-11641472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
530-875
               

               
Cow position:
               
chr14:16834635-16834265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
530-890
               

               
Cow position:
               
chr14:21357857-21357486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 147
               

               
Conread position:
               
531-808
               

               
Cow position:
               
chr14:7482359-7482072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
531-815
               

               
Cow position:
               
chr14:24894064-24893777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 211
               

               
Conread position:
               
531-845
               

               
Cow position:
               
chr14:41809348-41809675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 137
               

               
Conread position:
               
531-850
               

               
Cow position:
               
chr14:34199539-34199870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 6
               

               
Conread position:
               
531-850
               

               
Cow position:
               
chr14:41211161-41210828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
32, 202
               

               
Conread position:
               
531-892
               

               
Cow position:
               
chr14:45605393-45605024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
531-925
               

               
Cow position:
               
chr14:47603999-47604406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 92
               

               
Conread position:
               
531-936
               

               
Cow position:
               
chr14:10907021-10906613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
532-787
               

               
Cow position:
               
chr14:24581226-24580965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
533-714
               

               
Cow position:
               
chr14:25695682-25695495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
533-718
               

               
Cow position:
               
chr14:37108609-37108797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
533-730
               

               
Cow position:
               
chr14:15913252-15913450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
533-736
               

               
Cow position:
               
chr14:35711878-35712086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 110
               

               
Conread position:
               
533-760
               

               
Cow position:
               
chr14:12488400-12488631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
533-821
               

               
Cow position:
               
chr14:33828451-33828165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
533-841
               

               
Cow position:
               
chr14:39433962-39434277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
533-845
               

               
Cow position:
               
chr14:23682565-23682241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 143
               

               
Conread position:
               
533-850
               

               
Cow position:
               
chr14:39779055-39778725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
39, 174
               

               
Conread position:
               
533-851
               

               
Cow position:
               
chr14:22967053-22966727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
533-881
               

               
Cow position:
               
chr14:8784477-8784138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
533-892
               

               
Cow position:
               
chr14:38921239-38920879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
533-910
               

               
Cow position:
               
chr14:4991293-4990910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
533-916
               

               
Cow position:
               
chr14:40230335-40230732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
533-938
               

               
Cow position:
               
chr14:7960062-7959660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
533-945
               

               
Cow position:
               
chr14:5836206-5835786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 115
               

               
Conread position:
               
534-734
               

               
Cow position:
               
chr14:19633483-19633273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
534-740
               

               
Cow position:
               
chr14:12484248-12484456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
534-789
               

               
Cow position:
               
chr14:40346877-40347126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
534-884
               

               
Cow position:
               
chr14:48412576-48412948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
534-889
               

               
Cow position:
               
chr14:35381889-35381521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
534-889
               

               
Cow position:
               
chr14:41471669-41472036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
534-892
               

               
Cow position:
               
chr14:6735565-6735936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
535-731
               

               
Cow position:
               
chr14:12602176-12601972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
535-731
               

               
Cow position:
               
chr14:19624390-19624182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
535-873
               

               
Cow position:
               
chr14:12856895-12856545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
535-889
               

               
Cow position:
               
chr14:19863141-19863505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
535-889
               

               
Cow position:
               
chr14:38143814-38144178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
535-898
               

               
Cow position:
               
chr14:37883619-37883995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
535-925
               

               
Cow position:
               
chr14:37333991-37333595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
535-938
               

               
Cow position:
               
chr14:23712986-23712557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
535-938
               

               
Cow position:
               
chr14:33247138-33247558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
535-940
               

               
Cow position:
               
chr14:33773753-33774164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
536-890
               

               
Cow position:
               
chr14:19593841-19594209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
536-932
               

               
Cow position:
               
chr14:26449047-26448648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
536-938
               

               
Cow position:
               
chr14:38168982-38168566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
537-805
               

               
Cow position:
               
chr14:11819826-11820101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
537-887
               

               
Cow position:
               
chr14:35018458-35018822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
537-918
               

               
Cow position:
               
chr14:48740588-48740967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
538-888
               

               
Cow position:
               
chr14:50363093-50362724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
538-938
               

               
Cow position:
               
chr14:37678699-37679122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 144
               

               
Conread position:
               
539-851
               

               
Cow position:
               
chr14:3564569-3564256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
539-938
               

               
Cow position:
               
chr14:10742794-10742408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
540-904
               

               
Cow position:
               
chr14:14466185-14466542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
543-892
               

               
Cow position:
               
chr14:8102070-8101720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
543-938
               

               
Cow position:
               
chr14:13810229-13809816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
543-940
               

               
Cow position:
               
chr14:11614926-11615343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
545-784
               

               
Cow position:
               
chr14:24797290-24797538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
546-845
               

               
Cow position:
               
chr14:20010022-20010333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
547-892
               

               
Cow position:
               
chr14:24981743-24981385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
547-938
               

               
Cow position:
               
chr14:10858719-10858302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
548-731
               

               
Cow position:
               
chr14:17899771-17899583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
549-889
               

               
Cow position:
               
chr14:47672597-47672952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 255
               

               
Conread position:
               
555-718
               

               
Cow position:
               
chr14:47036524-47036686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
555-731
               

               
Cow position:
               
chr14:34163595-34163775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
555-889
               

               
Cow position:
               
chr14:19129791-19129435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
556-845
               

               
Cow position:
               
chr14:47609312-47609604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
556-891
               

               
Cow position:
               
chr14:17841008-17841364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
556-938
               

               
Cow position:
               
chr14:36554873-36555268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
556-938
               

               
Cow position:
               
chr14:37884134-37884519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 226
               

               
Conread position:
               
559-730
               

               
Cow position:
               
chr14:42918366-42918188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
559-789
               

               
Cow position:
               
chr14:24786209-24785980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
559-818
               

               
Cow position:
               
chr14:35498229-35498499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
559-916
               

               
Cow position:
               
chr14:6541445-6541822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
559-940
               

               
Cow position:
               
chr14:21691004-21691397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
561-731
               

               
Cow position:
               
chr14:14222049-14221868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
566-940
               

               
Cow position:
               
chr14:39037496-39037099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
571-754
               

               
Cow position:
               
chr14:37138073-37138259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
571-892
               

               
Cow position:
               
chr14:7695512-7695193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
571-897
               

               
Cow position:
               
chr14:19372605-19372258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
571-936
               

               
Cow position:
               
chr14:36289554-36289927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
573-821
               

               
Cow position:
               
chr14:6175843-6175587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
573-892
               

               
Cow position:
               
chr14:28114923-28115260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 311
               

               
Conread position:
               
575-845
               

               
Cow position:
               
chr14:48689787-48689507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 197
               

               
Conread position:
               
575-888
               

               
Cow position:
               
chr14:34984122-34983797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 166
               

               
Conread position:
               
575-889
               

               
Cow position:
               
chr14:1645931-1646255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 185
               

               
Conread position:
               
575-925
               

               
Cow position:
               
chr14:22459622-22459963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
576-888
               

               
Cow position:
               
chr14:33309252-33309573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
581-851
               

               
Cow position:
               
chr14:29030080-29029801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
581-936
               

               
Cow position:
               
chr14:10721483-10721838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
586-850
               

               
Cow position:
               
chr14:33643544-33643804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
604-938
               

               
Cow position:
               
chr14:14182566-14182213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
122, 31
               

               
Conread position:
               
605-852
               

               
Cow position:
               
chr14:25002259-25002006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
607-905
               

               
Cow position:
               
chr14:20435618-20435305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 252
               

               
Conread position:
               
609-938
               

               
Cow position:
               
chr14:23050432-23050731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
219, 28
               

               
Conread position:
               
613-890
               

               
Cow position:
               
chr14:33830511-33830231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
623-936
               

               
Cow position:
               
chr14:16256970-16256638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
626-850
               

               
Cow position:
               
chr14:24608167-24607940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
628-815
               

               
Cow position:
               
chr14:41966443-41966253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
643-850
               

               
Cow position:
               
chr14:21933155-21933370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
644-892
               

               
Cow position:
               
chr14:4877046-4877303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 181
               

               
Conread position:
               
644-892
               

               
Cow position:
               
chr14:46685483-46685233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 152
               

               
Conread position:
               
646-889
               

               
Cow position:
               
chr14:18763262-18763504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
647-912
               

               
Cow position:
               
chr14:37447287-37447559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
648-889
               

               
Cow position:
               
chr14:4202912-4203169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
650-892
               

               
Cow position:
               
chr14:12035587-12035335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
652-940
               

               
Cow position:
               
chr14:23424434-23424125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
652-940
               

               
Cow position:
               
chr14:23443195-23442886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
654-941
               

               
Cow position:
               
chr14:12511726-12512032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
660-940
               

               
Cow position:
               
chr14:46998215-46997912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
663-937
               

               
Cow position:
               
chr14:25639612-25639889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
670-889
               

               
Cow position:
               
chr14:22941563-22941799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
670-892
               

               
Cow position:
               
chr14:27275320-27275089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 152
               

               
Conread position:
               
670-938
               

               
Cow position:
               
chr14:1868643-1868926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
675-938
               

               
Cow position:
               
chr14:41252835-41253117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
49, 148
               

               
Conread position:
               
692-920
               

               
Cow position:
               
chr14:23478956-23478730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
701-938
               

               
Cow position:
               
chr14:12127284-12127535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
744-938
               

               
Cow position:
               
chr14:4271298-4271499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
82, 120
               

               
Conread position:
               
769-936
               

               
Cow position:
               
chr14:41531610-41531780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
774-941
               

               
Cow position:
               
chr14:16207448-16207630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
778-937
               

               
Cow position:
               
chr14:47519707-47519870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
779-938
               

               
Cow position:
               
chr14:6441953-6441788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
781-938
               

               
Cow position:
               
chr14:26805012-26805171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
793-921
               

               
Cow position:
               
chr14:5400616-5400482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
795-936
               

               
Cow position:
               
chr14:48399537-48399387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
805-938
               

               
Cow position:
               
chr14:24799689-24799827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               
Show alignments to all cow chromosomes.