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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8024N04.3
        

               
Conread position:
               
99-363
               

               
Cow position:
               
chr16:25964465-25964720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
167, 6
               

               
Conread position:
               
104-328
               

               
Cow position:
               
chr16:10859771-10859553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
112-288
               

               
Cow position:
               
chr16:39475393-39475573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
112-340
               

               
Cow position:
               
chr16:52856275-52856054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
154, 22
               

               
Conread position:
               
112-344
               

               
Cow position:
               
chr16:193373-193143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
156, 20
               

               
Conread position:
               
112-349
               

               
Cow position:
               
chr16:51087347-51087584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
112-353
               

               
Cow position:
               
chr16:25893072-25893312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
154, 33
               

               
Conread position:
               
112-377
               

               
Cow position:
               
chr16:16095763-16096027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
113-295
               

               
Cow position:
               
chr16:48371538-48371357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-305
               

               
Cow position:
               
chr16:21189823-21190014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-316
               

               
Cow position:
               
chr16:12244476-12244278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
113-328
               

               
Cow position:
               
chr16:23711722-23711508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-329
               

               
Cow position:
               
chr16:36247036-36247249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
113-329
               

               
Cow position:
               
chr16:37053603-37053818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr16:18425969-18426188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr16:24636949-24636722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr16:25935311-25935536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
151, 18
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:2960244-2960473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:12651493-12651714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:13722024-13721795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:16681030-16680798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:24209833-24209604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:24987939-24987710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:25075158-25075387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:25879881-25880110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:26658530-26658759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:26990375-26990146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
155, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:27593257-27593030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:28193735-28193507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:28268150-28267923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
153, 30
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:40879157-40879386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:45559858-45560084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr16:49780385-49780156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr16:4079396-4079167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr16:5435390-5435620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr16:7504004-7504228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr16:15311846-15312076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr16:18212630-18212400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr16:20278405-20278635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr16:46554987-46555217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
151, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr16:49516219-49515986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr16:52526796-52527026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-353
               

               
Cow position:
               
chr16:5416711-5416468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
113-353
               

               
Cow position:
               
chr16:45755057-45754827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-362
               

               
Cow position:
               
chr16:14029584-14029347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr16:7155169-7155418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
131, 23
               

               
Conread position:
               
113-372
               

               
Cow position:
               
chr16:25173806-25174061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-373
               

               
Cow position:
               
chr16:47403945-47404202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-374
               

               
Cow position:
               
chr16:7303321-7303579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-374
               

               
Cow position:
               
chr16:45465352-45465098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr16:237046-237309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr16:5488436-5488703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr16:41575808-41576072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr16:47772829-47773095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
114-339
               

               
Cow position:
               
chr16:8871876-8871653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
114-370
               

               
Cow position:
               
chr16:2224386-2224130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
115-274
               

               
Cow position:
               
chr16:54287105-54287266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
115-283
               

               
Cow position:
               
chr16:819536-819699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
115-327
               

               
Cow position:
               
chr16:26975634-26975425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
115-332
               

               
Cow position:
               
chr16:45655014-45654798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
115-334
               

               
Cow position:
               
chr16:55867895-55868106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
115-338
               

               
Cow position:
               
chr16:20634647-20634437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
115-338
               

               
Cow position:
               
chr16:52589043-52588825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
115-338
               

               
Cow position:
               
chr16:53612370-53612590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
151, 28
               

               
Conread position:
               
115-339
               

               
Cow position:
               
chr16:4367188-4367410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
115-343
               

               
Cow position:
               
chr16:24445007-24445246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr16:55150895-55151125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
115-375
               

               
Cow position:
               
chr16:17141970-17142226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
116-249
               

               
Cow position:
               
chr16:43728-43859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
116-342
               

               
Cow position:
               
chr16:4690982-4691204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
116-343
               

               
Cow position:
               
chr16:41036458-41036233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
116-344
               

               
Cow position:
               
chr16:41804878-41804663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr16:37925415-37925188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
119-343
               

               
Cow position:
               
chr16:18694401-18694172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
119-344
               

               
Cow position:
               
chr16:18651013-18650789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
146, 11
               

               
Conread position:
               
119-344
               

               
Cow position:
               
chr16:48341636-48341412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
119-377
               

               
Cow position:
               
chr16:23810089-23810348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
121-330
               

               
Cow position:
               
chr16:42751724-42751924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
121-380
               

               
Cow position:
               
chr16:42733711-42733457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
122-339
               

               
Cow position:
               
chr16:28696576-28696354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
122-344
               

               
Cow position:
               
chr16:41106-41329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
122-344
               

               
Cow position:
               
chr16:7137276-7137054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
123-288
               

               
Cow position:
               
chr16:20201648-20201812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
123-348
               

               
Cow position:
               
chr16:23065586-23065804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
124-344
               

               
Cow position:
               
chr16:25168812-25169021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
124-389
               

               
Cow position:
               
chr16:50712862-50712606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
125-364
               

               
Cow position:
               
chr16:4343331-4343095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
140, 193
               

               
Conread position:
               
126-344
               

               
Cow position:
               
chr16:5895018-5895227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
126-344
               

               
Cow position:
               
chr16:41033875-41034095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
126-371
               

               
Cow position:
               
chr16:9785890-9786138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
127-343
               

               
Cow position:
               
chr16:14040002-14040219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
127-343
               

               
Cow position:
               
chr16:44450520-44450737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
127-344
               

               
Cow position:
               
chr16:13422345-13422128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
127-344
               

               
Cow position:
               
chr16:14100429-14100643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
138, 146
               

               
Conread position:
               
127-344
               

               
Cow position:
               
chr16:22799127-22798909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
127-371
               

               
Cow position:
               
chr16:42074323-42074075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
127-377
               

               
Cow position:
               
chr16:417472-417727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
114, 122
               

               
Conread position:
               
127-389
               

               
Cow position:
               
chr16:26666281-26666544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
138, 253
               

               
Conread position:
               
131-328
               

               
Cow position:
               
chr16:54703077-54703275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr16:3148459-3148244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr16:24240819-24240605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 118
               

               
Conread position:
               
131-377
               

               
Cow position:
               
chr16:2480568-2480323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
134, 58
               

               
Conread position:
               
131-377
               

               
Cow position:
               
chr16:12160702-12160452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
131-377
               

               
Cow position:
               
chr16:21018140-21018391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
132-344
               

               
Cow position:
               
chr16:49096546-49096759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
134-385
               

               
Cow position:
               
chr16:47247656-47247912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
135-409
               

               
Cow position:
               
chr16:47018165-47017888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
137-344
               

               
Cow position:
               
chr16:1958141-1957931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
137-377
               

               
Cow position:
               
chr16:7467198-7467440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
137-377
               

               
Cow position:
               
chr16:8813518-8813273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
139-270
               

               
Cow position:
               
chr16:15255893-15255761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
139-330
               

               
Cow position:
               
chr16:25088198-25088398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
105, 165
               

               
Conread position:
               
139-339
               

               
Cow position:
               
chr16:5844497-5844704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
129, 54
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr16:5525510-5525305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr16:8482031-8481835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr16:20204592-20204791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
127, 90
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr16:5350919-5350713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr16:14352095-14351889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr16:15979789-15979583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr16:25444465-25444671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr16:37388210-37388007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr16:39033756-39033550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr16:39456978-39457178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
89, 99
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr16:41515721-41515929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
105, 41
               

               
Conread position:
               
139-360
               

               
Cow position:
               
chr16:15485380-15485600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
139-368
               

               
Cow position:
               
chr16:28206522-28206288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr16:28468534-28468296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr16:44256544-44256312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr16:48411224-48411462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:1734327-1734571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:2408305-2408060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 153
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:2724635-2724392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:3769422-3769176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:4426680-4426922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:23249366-23249123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:25454872-25454629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:27730792-27730549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:37446110-37445872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:41164185-41163943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
126, 171
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:43562806-43562564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:43894673-43894429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
55, 112
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:46102030-46101787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:54322834-54322578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr16:5665690-5665955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
140-285
               

               
Cow position:
               
chr16:56445900-56445756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
126, 107
               

               
Conread position:
               
140-334
               

               
Cow position:
               
chr16:29093714-29093906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
140-339
               

               
Cow position:
               
chr16:5655798-5655997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
140-339
               

               
Cow position:
               
chr16:39615812-39616012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr16:18975458-18975662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr16:23773085-23772881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr16:32118169-32118373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr16:37058423-37058221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
125, 96
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr16:25344569-25344774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
140-345
               

               
Cow position:
               
chr16:15804895-15805103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
140-345
               

               
Cow position:
               
chr16:25954994-25954793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
140-345
               

               
Cow position:
               
chr16:37454894-37454690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
126, 137
               

               
Conread position:
               
140-349
               

               
Cow position:
               
chr16:47367576-47367786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
140-364
               

               
Cow position:
               
chr16:13988881-13989101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr16:7457392-7457160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
128, 80
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr16:48010803-48010581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
140-376
               

               
Cow position:
               
chr16:8368136-8367901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
206, 120
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr16:45534052-45534289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
128, 193
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr16:49142483-49142240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
140-429
               

               
Cow position:
               
chr16:5833388-5833677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
126, 169
               

               
Conread position:
               
141-364
               

               
Cow position:
               
chr16:16540000-16540219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
142-339
               

               
Cow position:
               
chr16:11007292-11007501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
142-344
               

               
Cow position:
               
chr16:48495326-48495124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
142-376
               

               
Cow position:
               
chr16:12175477-12175240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 193
               

               
Conread position:
               
143-349
               

               
Cow position:
               
chr16:55682096-55682302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
6, 100
               

               
Conread position:
               
145-270
               

               
Cow position:
               
chr16:15409491-15409364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
145-342
               

               
Cow position:
               
chr16:25157805-25157613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
122, 55
               

               
Conread position:
               
145-342
               

               
Cow position:
               
chr16:27012992-27013190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
145-344
               

               
Cow position:
               
chr16:41761989-41762189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
145-356
               

               
Cow position:
               
chr16:21090687-21090900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
145-377
               

               
Cow position:
               
chr16:7566662-7566898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
146-339
               

               
Cow position:
               
chr16:30052541-30052735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
146-349
               

               
Cow position:
               
chr16:29512371-29512573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
146-378
               

               
Cow position:
               
chr16:31425654-31425891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
148-343
               

               
Cow position:
               
chr16:8883531-8883727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
149-339
               

               
Cow position:
               
chr16:12736880-12737070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
149-344
               

               
Cow position:
               
chr16:600018-600215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
150-338
               

               
Cow position:
               
chr16:43770558-43770367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
21, 139
               

               
Conread position:
               
150-343
               

               
Cow position:
               
chr16:16237384-16237189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
150-349
               

               
Cow position:
               
chr16:23563052-23563248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
151-349
               

               
Cow position:
               
chr16:24147253-24147452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
151-377
               

               
Cow position:
               
chr16:29539211-29538981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
152-342
               

               
Cow position:
               
chr16:45704195-45704005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 135
               

               
Conread position:
               
152-377
               

               
Cow position:
               
chr16:41834466-41834697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
154-344
               

               
Cow position:
               
chr16:7541085-7541276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 180
               

               
Conread position:
               
154-371
               

               
Cow position:
               
chr16:16543061-16543270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
155-280
               

               
Cow position:
               
chr16:14569592-14569468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
155-305
               

               
Cow position:
               
chr16:26868151-26868001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
110, 145
               

               
Conread position:
               
155-307
               

               
Cow position:
               
chr16:3349613-3349763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 118
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr16:2304967-2305158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr16:5352591-5352403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr16:6677326-6677515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr16:7385370-7385559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr16:12485695-12485506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr16:16150143-16149954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr16:16942321-16942510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr16:20502640-20502829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr16:35342896-35342707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:2963252-2963062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:4711972-4712166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 183
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:10440844-10441033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
110, 174
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:19062441-19062630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
100, 120
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:19081657-19081841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:19778333-19778142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:22320684-22320494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:23533394-23533205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:23985918-23986108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:26627357-26627547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:42211101-42211291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:44049315-44049129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:44675958-44676149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:49094492-49094303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
110, 154
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:49742924-49742735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr16:56913633-56913443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-349
               

               
Cow position:
               
chr16:6390051-6389854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
155-349
               

               
Cow position:
               
chr16:29158222-29158409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
113, 47
               

               
Conread position:
               
155-353
               

               
Cow position:
               
chr16:23059482-23059281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
155-353
               

               
Cow position:
               
chr16:53509921-53509726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
178, 23
               

               
Conread position:
               
155-372
               

               
Cow position:
               
chr16:7673856-7673640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
85, 94
               

               
Conread position:
               
155-374
               

               
Cow position:
               
chr16:24407515-24407734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 197
               

               
Conread position:
               
155-374
               

               
Cow position:
               
chr16:52952635-52952418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
110, 191
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr16:11633239-11633012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr16:15187669-15187892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
110, 177
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr16:15495059-15495285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr16:15570375-15570597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
110, 148
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr16:29050250-29050476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
86, 94
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr16:37478256-37478029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr16:40293566-40293338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr16:50190509-50190290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
111, 71
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr16:51640854-51641079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr16:54228683-54228455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr16:54231743-54231520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
110, 187
               

               
Conread position:
               
156-300
               

               
Cow position:
               
chr16:49253645-49253501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
156-303
               

               
Cow position:
               
chr16:34482768-34482911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
156-308
               

               
Cow position:
               
chr16:12535348-12535195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
156-342
               

               
Cow position:
               
chr16:42079744-42079563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 50
               

               
Conread position:
               
156-343
               

               
Cow position:
               
chr16:4398859-4399048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
110, 149
               

               
Conread position:
               
156-344
               

               
Cow position:
               
chr16:15369596-15369786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
156-349
               

               
Cow position:
               
chr16:27818336-27818142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
156-367
               

               
Cow position:
               
chr16:26500261-26500464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 50
               

               
Conread position:
               
156-374
               

               
Cow position:
               
chr16:55591396-55591179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
156-376
               

               
Cow position:
               
chr16:45609015-45609238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
156-377
               

               
Cow position:
               
chr16:839877-840102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 147
               

               
Conread position:
               
156-377
               

               
Cow position:
               
chr16:1563782-1563555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
156-392
               

               
Cow position:
               
chr16:18745430-18745198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
156-419
               

               
Cow position:
               
chr16:20378051-20378307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
109, 194
               

               
Conread position:
               
158-343
               

               
Cow position:
               
chr16:19409746-19409561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
108, 7
               

               
Conread position:
               
159-317
               

               
Cow position:
               
chr16:49230672-49230512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
160-339
               

               
Cow position:
               
chr16:41624080-41623901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
106, 150
               

               
Conread position:
               
160-340
               

               
Cow position:
               
chr16:34833572-34833391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
163-337
               

               
Cow position:
               
chr16:37670895-37670720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
5, 55
               

               
Conread position:
               
166-374
               

               
Cow position:
               
chr16:49577595-49577796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
166-409
               

               
Cow position:
               
chr16:49219336-49219093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
169-349
               

               
Cow position:
               
chr16:44973129-44972946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
171-338
               

               
Cow position:
               
chr16:39645604-39645773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
172-344
               

               
Cow position:
               
chr16:42254691-42254523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
174-344
               

               
Cow position:
               
chr16:49510194-49510022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
175-339
               

               
Cow position:
               
chr16:7009952-7010117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
175-344
               

               
Cow position:
               
chr16:20475328-20475498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
57, 137
               

               
Conread position:
               
176-339
               

               
Cow position:
               
chr16:19798070-19797904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
176-344
               

               
Cow position:
               
chr16:6380012-6379844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
90, 75
               

               
Conread position:
               
176-389
               

               
Cow position:
               
chr16:14757814-14758020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
181-349
               

               
Cow position:
               
chr16:3027063-3027231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 161
               

               
Conread position:
               
181-349
               

               
Cow position:
               
chr16:3030641-3030473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 161
               

               
Conread position:
               
184-339
               

               
Cow position:
               
chr16:53622208-53622051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
184-361
               

               
Cow position:
               
chr16:18204862-18205038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 162
               

               
Conread position:
               
185-361
               

               
Cow position:
               
chr16:14722626-14722452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
186-344
               

               
Cow position:
               
chr16:24615439-24615280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
189-377
               

               
Cow position:
               
chr16:825112-825304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 60
               

               
Conread position:
               
193-359
               

               
Cow position:
               
chr16:24228884-24229050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
73, 149
               

               
Conread position:
               
194-389
               

               
Cow position:
               
chr16:46223867-46223672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
74, 153
               

               
Conread position:
               
196-377
               

               
Cow position:
               
chr16:42745838-42745652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
278-940
               

               
Cow position:
               
chr16:43865-44528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
337-500
               

               
Cow position:
               
chr16:7457346-7457182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
352-509
               

               
Cow position:
               
chr16:14029504-14029347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
355-510
               

               
Cow position:
               
chr16:45534122-45534276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
355-512
               

               
Cow position:
               
chr16:41575903-41576059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
359-511
               

               
Cow position:
               
chr16:42074235-42074083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
444-938
               

               
Cow position:
               
chr16:14754669-14754147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 42
               

               
Conread position:
               
444-938
               

               
Cow position:
               
chr16:53267387-53267885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
477-851
               

               
Cow position:
               
chr16:13969693-13969299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
481-935
               

               
Cow position:
               
chr16:30639032-30639484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
483-731
               

               
Cow position:
               
chr16:47662406-47662659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
489-888
               

               
Cow position:
               
chr16:14106345-14106750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
490-714
               

               
Cow position:
               
chr16:5293363-5293587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
491-921
               

               
Cow position:
               
chr16:15320770-15320338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
493-789
               

               
Cow position:
               
chr16:14028917-14028621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
494-730
               

               
Cow position:
               
chr16:33751901-33752141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
496-845
               

               
Cow position:
               
chr16:28833551-28833908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
497-938
               

               
Cow position:
               
chr16:29766051-29766501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
498-938
               

               
Cow position:
               
chr16:18557559-18557101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
499-938
               

               
Cow position:
               
chr16:23472455-23472923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
502-875
               

               
Cow position:
               
chr16:52889700-52889312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
70, 186
               

               
Conread position:
               
502-883
               

               
Cow position:
               
chr16:15960581-15960182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
502-892
               

               
Cow position:
               
chr16:15726649-15726243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
503-841
               

               
Cow position:
               
chr16:5477636-5477298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
506-815
               

               
Cow position:
               
chr16:44676605-44676908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
507-886
               

               
Cow position:
               
chr16:29095667-29096032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
507-892
               

               
Cow position:
               
chr16:17142653-17143052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
511-836
               

               
Cow position:
               
chr16:47245307-47245645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 125
               

               
Conread position:
               
511-892
               

               
Cow position:
               
chr16:19408794-19408411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
53, 123
               

               
Conread position:
               
515-836
               

               
Cow position:
               
chr16:30515858-30515533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
516-889
               

               
Cow position:
               
chr16:5845395-5845783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
516-925
               

               
Cow position:
               
chr16:43506073-43505661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
517-935
               

               
Cow position:
               
chr16:35187982-35188408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
517-938
               

               
Cow position:
               
chr16:8704022-8704418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
518-835
               

               
Cow position:
               
chr16:54287603-54287920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 121
               

               
Conread position:
               
520-731
               

               
Cow position:
               
chr16:37442400-37442180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
520-889
               

               
Cow position:
               
chr16:51113148-51112766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
520-890
               

               
Cow position:
               
chr16:7702259-7702633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
55, 195
               

               
Conread position:
               
524-845
               

               
Cow position:
               
chr16:4981639-4981312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
524-848
               

               
Cow position:
               
chr16:39394309-39394637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
524-850
               

               
Cow position:
               
chr16:18141597-18141257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
524-850
               

               
Cow position:
               
chr16:33226800-33226469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
48, 106
               

               
Conread position:
               
524-868
               

               
Cow position:
               
chr16:35757946-35758295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
524-889
               

               
Cow position:
               
chr16:7498801-7499164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
524-889
               

               
Cow position:
               
chr16:38663979-38663597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
524-936
               

               
Cow position:
               
chr16:53627691-53627274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
524-938
               

               
Cow position:
               
chr16:37062660-37062242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
525-861
               

               
Cow position:
               
chr16:37380000-37380351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
525-938
               

               
Cow position:
               
chr16:52835146-52834720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
526-695
               

               
Cow position:
               
chr16:13043531-13043707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
526-731
               

               
Cow position:
               
chr16:8807356-8807145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
526-731
               

               
Cow position:
               
chr16:56150047-56150246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
526-733
               

               
Cow position:
               
chr16:590175-589970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
526-735
               

               
Cow position:
               
chr16:50014264-50014478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
526-746
               

               
Cow position:
               
chr16:15255217-15254990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
526-769
               

               
Cow position:
               
chr16:49141824-49141583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
526-789
               

               
Cow position:
               
chr16:34483695-34483940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
206, 39
               

               
Conread position:
               
526-805
               

               
Cow position:
               
chr16:22868443-22868154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
526-815
               

               
Cow position:
               
chr16:17665369-17665667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
526-815
               

               
Cow position:
               
chr16:24228616-24228318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
526-822
               

               
Cow position:
               
chr16:53547850-53547550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
526-835
               

               
Cow position:
               
chr16:42092642-42092332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
526-845
               

               
Cow position:
               
chr16:21450582-21450912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
526-845
               

               
Cow position:
               
chr16:37116808-37117139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 115
               

               
Conread position:
               
526-845
               

               
Cow position:
               
chr16:44744398-44744068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
526-846
               

               
Cow position:
               
chr16:4979550-4979868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
526-849
               

               
Cow position:
               
chr16:54578901-54579235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr16:5636323-5636654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 106
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr16:24825801-24826143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr16:32327387-32327728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr16:35937070-35937407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr16:51869372-51869709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
526-851
               

               
Cow position:
               
chr16:39646294-39646616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
526-852
               

               
Cow position:
               
chr16:9235745-9235410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
49, 187
               

               
Conread position:
               
526-883
               

               
Cow position:
               
chr16:2223673-2223289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
526-888
               

               
Cow position:
               
chr16:33645748-33646128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
46, 124
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr16:9973768-9973385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr16:13307129-13306758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr16:13698242-13698629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
39, 121
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr16:22842319-22841946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr16:29158866-29159234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr16:48145665-48145289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr16:53086590-53086227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
526-890
               

               
Cow position:
               
chr16:4972291-4971923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
46, 126
               

               
Conread position:
               
526-890
               

               
Cow position:
               
chr16:14242109-14242482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 115
               

               
Conread position:
               
526-890
               

               
Cow position:
               
chr16:18205705-18206074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
526-890
               

               
Cow position:
               
chr16:20634136-20633761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
526-890
               

               
Cow position:
               
chr16:37669994-37669623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
526-890
               

               
Cow position:
               
chr16:42079105-42078733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
526-892
               

               
Cow position:
               
chr16:819985-820371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
526-892
               

               
Cow position:
               
chr16:5740989-5741365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
216, 79
               

               
Conread position:
               
526-892
               

               
Cow position:
               
chr16:16402593-16402217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 301
               

               
Conread position:
               
526-902
               

               
Cow position:
               
chr16:15824704-15824315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
526-911
               

               
Cow position:
               
chr16:13181474-13181874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 276
               

               
Conread position:
               
526-911
               

               
Cow position:
               
chr16:52855282-52854883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
526-916
               

               
Cow position:
               
chr16:16548349-16548748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
526-925
               

               
Cow position:
               
chr16:4499175-4499573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
526-937
               

               
Cow position:
               
chr16:7542025-7542466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
81, 110
               

               
Conread position:
               
526-937
               

               
Cow position:
               
chr16:18693396-18692987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
526-939
               

               
Cow position:
               
chr16:45139404-45139846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
526-946
               

               
Cow position:
               
chr16:42734259-42733828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
200, 79
               

               
Conread position:
               
527-848
               

               
Cow position:
               
chr16:30715227-30715572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
527-850
               

               
Cow position:
               
chr16:33507798-33508142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 204
               

               
Conread position:
               
527-851
               

               
Cow position:
               
chr16:23483023-23483353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
527-904
               

               
Cow position:
               
chr16:43275757-43276147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
527-944
               

               
Cow position:
               
chr16:48385666-48385226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 301
               

               
Conread position:
               
528-938
               

               
Cow position:
               
chr16:8026107-8025688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
529-889
               

               
Cow position:
               
chr16:53509251-53508871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
529-892
               

               
Cow position:
               
chr16:5256740-5257113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
529-934
               

               
Cow position:
               
chr16:23066405-23066813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
34, 154
               

               
Conread position:
               
529-935
               

               
Cow position:
               
chr16:31419181-31419606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
13, 115
               

               
Conread position:
               
530-845
               

               
Cow position:
               
chr16:54298218-54298533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
530-889
               

               
Cow position:
               
chr16:35623512-35623136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
41, 278
               

               
Conread position:
               
531-702
               

               
Cow position:
               
chr16:8481347-8481172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
531-730
               

               
Cow position:
               
chr16:25484107-25484309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
531-731
               

               
Cow position:
               
chr16:2308423-2308632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 124
               

               
Conread position:
               
531-809
               

               
Cow position:
               
chr16:55308790-55308513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
531-844
               

               
Cow position:
               
chr16:24672620-24672294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
531-845
               

               
Cow position:
               
chr16:11790752-11791075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 238
               

               
Conread position:
               
531-849
               

               
Cow position:
               
chr16:8367086-8366762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 170
               

               
Conread position:
               
531-850
               

               
Cow position:
               
chr16:48340953-48340624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
531-851
               

               
Cow position:
               
chr16:5725215-5725538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
531-851
               

               
Cow position:
               
chr16:17745573-17745907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 114
               

               
Conread position:
               
531-851
               

               
Cow position:
               
chr16:30143473-30143129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
531-851
               

               
Cow position:
               
chr16:49169643-49169310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
531-879
               

               
Cow position:
               
chr16:8840631-8840986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
531-889
               

               
Cow position:
               
chr16:41590523-41590877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
531-942
               

               
Cow position:
               
chr16:42242379-42241938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
532-850
               

               
Cow position:
               
chr16:5416013-5415691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
532-850
               

               
Cow position:
               
chr16:9932896-9933228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
532-925
               

               
Cow position:
               
chr16:28267270-28266883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
533-764
               

               
Cow position:
               
chr16:39385142-39385387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
533-787
               

               
Cow position:
               
chr16:16424863-16424604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
533-802
               

               
Cow position:
               
chr16:39417368-39417099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
533-812
               

               
Cow position:
               
chr16:13791253-13791548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
533-844
               

               
Cow position:
               
chr16:3246451-3246141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
533-845
               

               
Cow position:
               
chr16:49125779-49125468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
533-846
               

               
Cow position:
               
chr16:26654927-26655235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
86, 141
               

               
Conread position:
               
533-849
               

               
Cow position:
               
chr16:46521643-46521958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
533-850
               

               
Cow position:
               
chr16:4059100-4059426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
533-851
               

               
Cow position:
               
chr16:5726670-5727004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
533-851
               

               
Cow position:
               
chr16:53892040-53891715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
533-866
               

               
Cow position:
               
chr16:11775310-11774957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
533-885
               

               
Cow position:
               
chr16:11103085-11102711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
533-889
               

               
Cow position:
               
chr16:4910790-4910411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 112
               

               
Conread position:
               
533-889
               

               
Cow position:
               
chr16:45731631-45731278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
533-892
               

               
Cow position:
               
chr16:14758480-14758856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
533-892
               

               
Cow position:
               
chr16:20025185-20025559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
533-937
               

               
Cow position:
               
chr16:56231564-56231992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
38, 272
               

               
Conread position:
               
534-845
               

               
Cow position:
               
chr16:35195868-35195548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
534-845
               

               
Cow position:
               
chr16:49216219-49215936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 81
               

               
Conread position:
               
534-850
               

               
Cow position:
               
chr16:16096481-16096806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 105
               

               
Conread position:
               
534-890
               

               
Cow position:
               
chr16:38709084-38708722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
534-938
               

               
Cow position:
               
chr16:51710386-51709968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 238
               

               
Conread position:
               
535-725
               

               
Cow position:
               
chr16:51043376-51043564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
535-728
               

               
Cow position:
               
chr16:902144-901940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
535-731
               

               
Cow position:
               
chr16:14799997-14799798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
535-789
               

               
Cow position:
               
chr16:29066911-29067169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
535-789
               

               
Cow position:
               
chr16:31159829-31159564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
535-789
               

               
Cow position:
               
chr16:41037427-41037698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
535-851
               

               
Cow position:
               
chr16:11105301-11105625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
535-883
               

               
Cow position:
               
chr16:22804838-22804490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
535-888
               

               
Cow position:
               
chr16:13611702-13611342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
535-889
               

               
Cow position:
               
chr16:13195590-13195225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
535-937
               

               
Cow position:
               
chr16:13660480-13660073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
535-938
               

               
Cow position:
               
chr16:29655068-29655495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
28, 177
               

               
Conread position:
               
535-940
               

               
Cow position:
               
chr16:8315431-8315029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
536-722
               

               
Cow position:
               
chr16:15805726-15805919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
536-790
               

               
Cow position:
               
chr16:9790887-9790622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
536-850
               

               
Cow position:
               
chr16:13689407-13689736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
536-889
               

               
Cow position:
               
chr16:8933675-8933314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
536-889
               

               
Cow position:
               
chr16:23737928-23738294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
536-889
               

               
Cow position:
               
chr16:40561970-40562345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 355
               

               
Conread position:
               
537-851
               

               
Cow position:
               
chr16:238006-238338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
537-864
               

               
Cow position:
               
chr16:13752378-13752048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
538-926
               

               
Cow position:
               
chr16:26373205-26372800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
539-938
               

               
Cow position:
               
chr16:15808721-15809140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
539-938
               

               
Cow position:
               
chr16:36930573-36930156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
539-938
               

               
Cow position:
               
chr16:51070182-51069753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 258
               

               
Conread position:
               
539-940
               

               
Cow position:
               
chr16:45047876-45047472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
541-889
               

               
Cow position:
               
chr16:50282682-50282318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
31, 221
               

               
Conread position:
               
542-789
               

               
Cow position:
               
chr16:47620130-47620387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
542-844
               

               
Cow position:
               
chr16:11806432-11806735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
543-845
               

               
Cow position:
               
chr16:56522721-56522409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
543-850
               

               
Cow position:
               
chr16:38905475-38905164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
543-916
               

               
Cow position:
               
chr16:8522636-8522249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
543-943
               

               
Cow position:
               
chr16:43661204-43661617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
545-845
               

               
Cow position:
               
chr16:26610387-26610704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
546-851
               

               
Cow position:
               
chr16:8280035-8279721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
546-890
               

               
Cow position:
               
chr16:33704552-33704920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 253
               

               
Conread position:
               
547-850
               

               
Cow position:
               
chr16:29557876-29557561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 226
               

               
Conread position:
               
548-890
               

               
Cow position:
               
chr16:8323227-8322868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
550-839
               

               
Cow position:
               
chr16:11568351-11568064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
552-814
               

               
Cow position:
               
chr16:13973518-13973253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
552-890
               

               
Cow position:
               
chr16:22772730-22773094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
553-836
               

               
Cow position:
               
chr16:45534944-45535231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
555-851
               

               
Cow position:
               
chr16:49230005-49229697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
555-889
               

               
Cow position:
               
chr16:51246726-51247048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
555-890
               

               
Cow position:
               
chr16:11008106-11008449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
555-890
               

               
Cow position:
               
chr16:30096367-30096020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
556-927
               

               
Cow position:
               
chr16:56082592-56082219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
559-892
               

               
Cow position:
               
chr16:14568718-14568373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
559-935
               

               
Cow position:
               
chr16:32837779-32837389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
559-938
               

               
Cow position:
               
chr16:15504757-15504351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
566-714
               

               
Cow position:
               
chr16:7395542-7395390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
567-839
               

               
Cow position:
               
chr16:39237721-39238005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
569-892
               

               
Cow position:
               
chr16:54665024-54664682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
570-934
               

               
Cow position:
               
chr16:42443934-42444309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
571-815
               

               
Cow position:
               
chr16:27249190-27249438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
571-821
               

               
Cow position:
               
chr16:26342058-26342306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
36, 42
               

               
Conread position:
               
571-845
               

               
Cow position:
               
chr16:52636601-52636319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
571-846
               

               
Cow position:
               
chr16:24747090-24747352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
182, 32
               

               
Conread position:
               
571-852
               

               
Cow position:
               
chr16:4626614-4626319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
571-889
               

               
Cow position:
               
chr16:5896200-5896532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
571-889
               

               
Cow position:
               
chr16:32302206-32301892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
571-913
               

               
Cow position:
               
chr16:43105732-43105381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
571-916
               

               
Cow position:
               
chr16:50288938-50289289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
571-930
               

               
Cow position:
               
chr16:42339986-42340355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
571-938
               

               
Cow position:
               
chr16:48492964-48493343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
574-848
               

               
Cow position:
               
chr16:13233161-13232881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
574-892
               

               
Cow position:
               
chr16:43801125-43800803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
94, 31
               

               
Conread position:
               
574-930
               

               
Cow position:
               
chr16:21904946-21905300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
31, 141
               

               
Conread position:
               
574-938
               

               
Cow position:
               
chr16:10148065-10148448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
574-938
               

               
Cow position:
               
chr16:28692926-28692578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
575-938
               

               
Cow position:
               
chr16:25839402-25839792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
575-940
               

               
Cow position:
               
chr16:51696880-51697258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
576-845
               

               
Cow position:
               
chr16:10592226-10592496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
577-890
               

               
Cow position:
               
chr16:30037208-30036876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
28, 231
               

               
Conread position:
               
578-849
               

               
Cow position:
               
chr16:22860971-22860700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
578-850
               

               
Cow position:
               
chr16:12060201-12060486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
578-889
               

               
Cow position:
               
chr16:8193233-8193567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
580-938
               

               
Cow position:
               
chr16:51652485-51652829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
583-890
               

               
Cow position:
               
chr16:11957791-11957464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 321
               

               
Conread position:
               
586-889
               

               
Cow position:
               
chr16:17626730-17627043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
586-892
               

               
Cow position:
               
chr16:17982348-17982026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
588-843
               

               
Cow position:
               
chr16:42752658-42752913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
601-938
               

               
Cow position:
               
chr16:45692957-45693305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 239
               

               
Conread position:
               
603-892
               

               
Cow position:
               
chr16:52133696-52133399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
603-938
               

               
Cow position:
               
chr16:46628018-46627685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
604-850
               

               
Cow position:
               
chr16:51500755-51500999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
604-889
               

               
Cow position:
               
chr16:41530472-41530186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
604-892
               

               
Cow position:
               
chr16:17288760-17289064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
604-926
               

               
Cow position:
               
chr16:20260307-20260624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
37, 132
               

               
Conread position:
               
604-934
               

               
Cow position:
               
chr16:44723200-44722877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
604-938
               

               
Cow position:
               
chr16:6344620-6344277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
604-938
               

               
Cow position:
               
chr16:11085560-11085221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
604-938
               

               
Cow position:
               
chr16:19003252-19002929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
604-938
               

               
Cow position:
               
chr16:52275311-52274954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
607-849
               

               
Cow position:
               
chr16:21369302-21369553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
607-901
               

               
Cow position:
               
chr16:8076686-8076374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
607-938
               

               
Cow position:
               
chr16:22808729-22808393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
610-892
               

               
Cow position:
               
chr16:7549793-7550085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
114, 27
               

               
Conread position:
               
611-844
               

               
Cow position:
               
chr16:10651065-10650824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
613-888
               

               
Cow position:
               
chr16:47854770-47855051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
613-910
               

               
Cow position:
               
chr16:9444792-9445094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
614-850
               

               
Cow position:
               
chr16:31348942-31348696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 172
               

               
Conread position:
               
614-920
               

               
Cow position:
               
chr16:14974703-14974400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
614-938
               

               
Cow position:
               
chr16:41689527-41689853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
618-938
               

               
Cow position:
               
chr16:52577300-52577620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
619-851
               

               
Cow position:
               
chr16:50521312-50521548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
622-851
               

               
Cow position:
               
chr16:9136013-9136239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
638-937
               

               
Cow position:
               
chr16:27723064-27723391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 154
               

               
Conread position:
               
639-938
               

               
Cow position:
               
chr16:689563-689865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
644-845
               

               
Cow position:
               
chr16:8448787-8448589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
644-890
               

               
Cow position:
               
chr16:10772990-10773236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
80, 162
               

               
Conread position:
               
645-940
               

               
Cow position:
               
chr16:33596077-33595765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
647-848
               

               
Cow position:
               
chr16:54225646-54225451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
648-938
               

               
Cow position:
               
chr16:50934009-50933713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 85
               

               
Conread position:
               
649-850
               

               
Cow position:
               
chr16:50453624-50453828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
652-883
               

               
Cow position:
               
chr16:30136029-30135799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 172
               

               
Conread position:
               
654-851
               

               
Cow position:
               
chr16:7583264-7583468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
654-924
               

               
Cow position:
               
chr16:5020194-5019928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
654-938
               

               
Cow position:
               
chr16:36121113-36120815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
658-930
               

               
Cow position:
               
chr16:37719028-37719313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 235
               

               
Conread position:
               
660-888
               

               
Cow position:
               
chr16:11082882-11083110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
155, 44
               

               
Conread position:
               
660-891
               

               
Cow position:
               
chr16:9160965-9161199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
661-893
               

               
Cow position:
               
chr16:23955952-23955714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
664-938
               

               
Cow position:
               
chr16:54226721-54226433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 163
               

               
Conread position:
               
668-892
               

               
Cow position:
               
chr16:21317714-21317476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
673-850
               

               
Cow position:
               
chr16:33869874-33869695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
674-943
               

               
Cow position:
               
chr16:44581183-44580905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
680-888
               

               
Cow position:
               
chr16:56796772-56796553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
681-884
               

               
Cow position:
               
chr16:27160971-27160755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
691-881
               

               
Cow position:
               
chr16:18072078-18072278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
754-892
               

               
Cow position:
               
chr16:4736611-4736470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
754-938
               

               
Cow position:
               
chr16:28827205-28827015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
796-938
               

               
Cow position:
               
chr16:42629428-42629282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
802-938
               

               
Cow position:
               
chr16:10617833-10617691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               
Show alignments to all cow chromosomes.