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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8024N04.3
        

               
Conread position:
               
81-375
               

               
Cow position:
               
chr5:50923786-50923497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
185, 19
               

               
Conread position:
               
99-319
               

               
Cow position:
               
chr5:26135194-26134979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
167, 6
               

               
Conread position:
               
111-338
               

               
Cow position:
               
chr5:34524155-34523936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
112-323
               

               
Cow position:
               
chr5:15454858-15455057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
112-328
               

               
Cow position:
               
chr5:5682428-5682211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
112-343
               

               
Cow position:
               
chr5:1383064-1383286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
112-343
               

               
Cow position:
               
chr5:46817019-46816790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
152, 18
               

               
Conread position:
               
112-344
               

               
Cow position:
               
chr5:6455580-6455349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
112-374
               

               
Cow position:
               
chr5:31560327-31560594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 221
               

               
Conread position:
               
113-272
               

               
Cow position:
               
chr5:38848501-38848344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
113-275
               

               
Cow position:
               
chr5:2704468-2704306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
113-275
               

               
Cow position:
               
chr5:41356757-41356598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr5:24159019-24159213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr5:24632955-24632761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr5:36906978-36906784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-336
               

               
Cow position:
               
chr5:54088803-54089019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
113-338
               

               
Cow position:
               
chr5:26466722-26466932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-339
               

               
Cow position:
               
chr5:35207326-35207551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr5:51166225-51165998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:2395224-2394995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:2976870-2977098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:4754049-4753820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:6125078-6124850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:6694618-6694847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:12212617-12212846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:14543217-14542988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:26052815-26053044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:28012941-28013170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:34683276-34683049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:41333672-41333902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:41488754-41488982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:44275679-44275908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:46667158-46667387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:49565654-49565878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:52823123-52822895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:54136554-54136325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:54927835-54927608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:54930163-54929936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr5:58192002-58192228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
151, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:443225-442995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:1344811-1344577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
67, 98
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:4015788-4015558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:7141016-7140786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
36, 130
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:12337358-12337587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:16085727-16085496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:37625943-37626160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:41586358-41586588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:45179762-45179533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:54952038-54951808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:57336280-57336050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:58199094-58199323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:59064528-59064757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr5:72856958-72857189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
147, 17
               

               
Conread position:
               
113-354
               

               
Cow position:
               
chr5:43991366-43991606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-363
               

               
Cow position:
               
chr5:34559231-34559477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
113-368
               

               
Cow position:
               
chr5:25920697-25920452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
113-372
               

               
Cow position:
               
chr5:34670005-34669749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
113-374
               

               
Cow position:
               
chr5:710067-709811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-374
               

               
Cow position:
               
chr5:36369908-36369651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-374
               

               
Cow position:
               
chr5:46779600-46779856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
151, 17
               

               
Conread position:
               
113-376
               

               
Cow position:
               
chr5:16895062-16894805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
153, 27
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr5:24101734-24102001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr5:41548461-41548201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
113-379
               

               
Cow position:
               
chr5:48574739-48574480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
153, 21
               

               
Conread position:
               
114-319
               

               
Cow position:
               
chr5:21524135-21524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
114-338
               

               
Cow position:
               
chr5:40928936-40928718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
114-343
               

               
Cow position:
               
chr5:42743877-42744103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
114-347
               

               
Cow position:
               
chr5:39174158-39173931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
205, 16
               

               
Conread position:
               
114-349
               

               
Cow position:
               
chr5:4165716-4165946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
114-353
               

               
Cow position:
               
chr5:21827905-21828143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
114-356
               

               
Cow position:
               
chr5:38738114-38738345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
114-365
               

               
Cow position:
               
chr5:67654411-67654657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
115-232
               

               
Cow position:
               
chr5:47697120-47697005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
115-322
               

               
Cow position:
               
chr5:30294394-30294595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
115-323
               

               
Cow position:
               
chr5:24221081-24221288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
115-329
               

               
Cow position:
               
chr5:6180622-6180838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
115-330
               

               
Cow position:
               
chr5:30301938-30302144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
115-343
               

               
Cow position:
               
chr5:11631899-11631672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
115-343
               

               
Cow position:
               
chr5:23648343-23648117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
84, 69
               

               
Conread position:
               
115-343
               

               
Cow position:
               
chr5:50899721-50899944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
118, 19
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr5:41603367-41603592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr5:46796994-46797214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
151, 29
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr5:71456960-71456734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
115-348
               

               
Cow position:
               
chr5:23754265-23754038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
115-377
               

               
Cow position:
               
chr5:19969946-19969696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
115-389
               

               
Cow position:
               
chr5:62159839-62159570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
116-339
               

               
Cow position:
               
chr5:31634525-31634745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
116-339
               

               
Cow position:
               
chr5:40270754-40270535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
116-339
               

               
Cow position:
               
chr5:51501969-51502193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
116-372
               

               
Cow position:
               
chr5:6572157-6571910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
116-372
               

               
Cow position:
               
chr5:64845180-64844930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
118-342
               

               
Cow position:
               
chr5:15723227-15723003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
118-343
               

               
Cow position:
               
chr5:47854916-47855140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
118-389
               

               
Cow position:
               
chr5:28947321-28947040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
119-301
               

               
Cow position:
               
chr5:71738202-71738382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr5:33536706-33536897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
119-328
               

               
Cow position:
               
chr5:13258680-13258884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
119-374
               

               
Cow position:
               
chr5:37380174-37380427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
146, 226
               

               
Conread position:
               
121-327
               

               
Cow position:
               
chr5:60446525-60446729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
121-342
               

               
Cow position:
               
chr5:6219033-6219256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
121-344
               

               
Cow position:
               
chr5:15856131-15855918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
121-359
               

               
Cow position:
               
chr5:49132289-49132519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
123-343
               

               
Cow position:
               
chr5:28026494-28026708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
123-375
               

               
Cow position:
               
chr5:54721751-54721997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
123-389
               

               
Cow position:
               
chr5:53834746-53835011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
124-328
               

               
Cow position:
               
chr5:72046568-72046366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
125-343
               

               
Cow position:
               
chr5:5106318-5106536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
140, 94
               

               
Conread position:
               
125-343
               

               
Cow position:
               
chr5:62436217-62436433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
126-344
               

               
Cow position:
               
chr5:14551507-14551287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
127-377
               

               
Cow position:
               
chr5:10853738-10853483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
114, 122
               

               
Conread position:
               
131-377
               

               
Cow position:
               
chr5:10921945-10922196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
131-377
               

               
Cow position:
               
chr5:30582426-30582676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
132-383
               

               
Cow position:
               
chr5:24643771-24643517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
5, 114
               

               
Conread position:
               
136-372
               

               
Cow position:
               
chr5:44709268-44709026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
136-377
               

               
Cow position:
               
chr5:26096377-26096622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 111
               

               
Conread position:
               
137-343
               

               
Cow position:
               
chr5:35180234-35180442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
137-344
               

               
Cow position:
               
chr5:3970630-3970836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
128, 141
               

               
Conread position:
               
137-344
               

               
Cow position:
               
chr5:5715981-5715775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
137-344
               

               
Cow position:
               
chr5:47560456-47560246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
137-344
               

               
Cow position:
               
chr5:55722635-55722843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
137-377
               

               
Cow position:
               
chr5:55631169-55631415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
137-377
               

               
Cow position:
               
chr5:58770766-58770521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
138-377
               

               
Cow position:
               
chr5:4388283-4388532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 136
               

               
Conread position:
               
139-323
               

               
Cow position:
               
chr5:17387309-17387125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
126, 181
               

               
Conread position:
               
139-342
               

               
Cow position:
               
chr5:4434396-4434192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
139-342
               

               
Cow position:
               
chr5:8178242-8178446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-342
               

               
Cow position:
               
chr5:29763019-29763219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
126, 134
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr5:1395354-1395149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr5:4683392-4683188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
126, 91
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr5:4963278-4963073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr5:6060523-6060318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr5:39362980-39363185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr5:41067122-41067323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
126, 87
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr5:14558350-14558144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr5:15761262-15761054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr5:27907354-27907154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 64
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr5:29256106-29255900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr5:47342981-47343187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-371
               

               
Cow position:
               
chr5:43984192-43984429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr5:3501020-3500782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr5:12921506-12921742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 109
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr5:19978806-19978569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr5:54337010-54337248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr5:46707745-46707983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr5:48026376-48026609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 207
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:280071-279829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:1338813-1338570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:3789336-3789574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:6151724-6151481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:7175406-7175649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:12133701-12133944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 110
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:14636470-14636228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:18558300-18558067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:24299121-24299364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:34708877-34709120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:43437834-43437591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:46676721-46676964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:48805353-48805119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
207, 114
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:49117243-49117000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:52829678-52829436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
127, 179
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr5:54786000-54785758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
139-389
               

               
Cow position:
               
chr5:29742453-29742206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
125, 207
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr5:7396356-7396618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
140-315
               

               
Cow position:
               
chr5:6044111-6044283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr5:70103572-70103388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
140-328
               

               
Cow position:
               
chr5:8529760-8529943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
140-328
               

               
Cow position:
               
chr5:16100448-16100263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
140-328
               

               
Cow position:
               
chr5:55087962-55088152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
140-334
               

               
Cow position:
               
chr5:10262168-10261970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
140-337
               

               
Cow position:
               
chr5:72007784-72007586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
140-339
               

               
Cow position:
               
chr5:4629870-4630069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
126, 49
               

               
Conread position:
               
140-339
               

               
Cow position:
               
chr5:32964951-32964751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
140-339
               

               
Cow position:
               
chr5:52437203-52437399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr5:17027183-17027378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr5:17426041-17425835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 120
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr5:21189330-21189532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
125, 92
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr5:27006758-27006955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
126, 62
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr5:40791945-40792146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr5:40828270-40828065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr5:41228939-41228729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 82
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr5:45705120-45705325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
126, 189
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr5:46626167-46625962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
140-358
               

               
Cow position:
               
chr5:48225467-48225249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
200, 104
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr5:8996899-8996676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
140-363
               

               
Cow position:
               
chr5:31921170-31921392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr5:6671060-6670829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr5:7498876-7498634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr5:15362153-15362388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
126, 151
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr5:49521808-49522054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr5:66337960-66338196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
126, 191
               

               
Conread position:
               
141-343
               

               
Cow position:
               
chr5:12558471-12558266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 195
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr5:34299992-34300211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
125, 58
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr5:73485776-73485540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
141-376
               

               
Cow position:
               
chr5:39448436-39448203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
127, 108
               

               
Conread position:
               
141-377
               

               
Cow position:
               
chr5:23845430-23845203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
141-377
               

               
Cow position:
               
chr5:27178744-27178986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
141-398
               

               
Cow position:
               
chr5:9003000-9002736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
142-280
               

               
Cow position:
               
chr5:69098267-69098407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
142-336
               

               
Cow position:
               
chr5:18883493-18883304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
142-338
               

               
Cow position:
               
chr5:59771159-59771355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
124, 149
               

               
Conread position:
               
142-342
               

               
Cow position:
               
chr5:39816189-39815992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
143-344
               

               
Cow position:
               
chr5:22857521-22857319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
144-389
               

               
Cow position:
               
chr5:62377479-62377726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
145-337
               

               
Cow position:
               
chr5:10096726-10096535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
145-377
               

               
Cow position:
               
chr5:32755336-32755100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
147-344
               

               
Cow position:
               
chr5:55985763-55985961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
147-374
               

               
Cow position:
               
chr5:10479530-10479301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
148-377
               

               
Cow position:
               
chr5:1780461-1780239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
149-319
               

               
Cow position:
               
chr5:48056170-48056338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 86
               

               
Conread position:
               
149-344
               

               
Cow position:
               
chr5:50599177-50599371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
150-338
               

               
Cow position:
               
chr5:46671724-46671912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
150-343
               

               
Cow position:
               
chr5:17645962-17645769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
150-343
               

               
Cow position:
               
chr5:45941877-45941685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
150-353
               

               
Cow position:
               
chr5:41411315-41411117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
150-355
               

               
Cow position:
               
chr5:6840061-6839866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
150-364
               

               
Cow position:
               
chr5:47471515-47471730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
150-371
               

               
Cow position:
               
chr5:29558710-29558935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
85, 163
               

               
Conread position:
               
150-374
               

               
Cow position:
               
chr5:39749323-39749098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
150-377
               

               
Cow position:
               
chr5:25927309-25927078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
150-377
               

               
Cow position:
               
chr5:58461574-58461345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
151-344
               

               
Cow position:
               
chr5:51684497-51684303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
151-410
               

               
Cow position:
               
chr5:14630811-14630548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
8, 152
               

               
Conread position:
               
152-338
               

               
Cow position:
               
chr5:27063116-27062931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
114, 18
               

               
Conread position:
               
152-344
               

               
Cow position:
               
chr5:3203959-3204144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
152-377
               

               
Cow position:
               
chr5:53185382-53185152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
153-337
               

               
Cow position:
               
chr5:34192045-34192228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
155-280
               

               
Cow position:
               
chr5:29769184-29769310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
155-298
               

               
Cow position:
               
chr5:9091301-9091158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
155-322
               

               
Cow position:
               
chr5:59146501-59146669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-339
               

               
Cow position:
               
chr5:28223564-28223748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
155-339
               

               
Cow position:
               
chr5:32088655-32088470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
155-339
               

               
Cow position:
               
chr5:37384411-37384226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr5:295389-295574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 118
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr5:5924853-5924664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr5:18404932-18404745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr5:18667431-18667620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr5:24577560-24577749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr5:29223141-29222952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr5:42283294-42283476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr5:58900920-58900731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr5:59146732-59146921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr5:67813986-67814175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:445603-445793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:1059443-1059253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:6772690-6772879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:7042366-7042555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:10066426-10066236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:20107903-20107716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:29634553-29634743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:32810902-32810716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
97, 119
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:44617269-44617459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:46735153-46734963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:49221369-49221185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 34
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:50728434-50728617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:52041360-52041175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
112, 89
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:53075746-53075556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr5:76098906-76098716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-349
               

               
Cow position:
               
chr5:41523867-41523675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 74
               

               
Conread position:
               
155-361
               

               
Cow position:
               
chr5:18703305-18703101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
155-376
               

               
Cow position:
               
chr5:47871984-47871764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
111, 191
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr5:2917586-2917808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
110, 86
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr5:5937430-5937657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr5:24087926-24087699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr5:29968732-29968959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr5:37735500-37735726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
110, 125
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr5:59782638-59782415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 91
               

               
Conread position:
               
155-377
               

               
Cow position:
               
chr5:64778878-64778650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
155-389
               

               
Cow position:
               
chr5:12872571-12872808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
156-337
               

               
Cow position:
               
chr5:27491101-27491284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 90
               

               
Conread position:
               
156-339
               

               
Cow position:
               
chr5:34527692-34527875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
110, 91
               

               
Conread position:
               
156-339
               

               
Cow position:
               
chr5:66256757-66256941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 51
               

               
Conread position:
               
156-343
               

               
Cow position:
               
chr5:41951939-41951753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
156-344
               

               
Cow position:
               
chr5:58353333-58353519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
156-374
               

               
Cow position:
               
chr5:6576466-6576250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
156-374
               

               
Cow position:
               
chr5:51746343-51746559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 190
               

               
Conread position:
               
156-377
               

               
Cow position:
               
chr5:9676504-9676279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
156-377
               

               
Cow position:
               
chr5:23829067-23828846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 93
               

               
Conread position:
               
157-371
               

               
Cow position:
               
chr5:59268543-59268751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
157-377
               

               
Cow position:
               
chr5:56442384-56442607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
158-344
               

               
Cow position:
               
chr5:5787203-5787016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
158-349
               

               
Cow position:
               
chr5:39936227-39936419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
158-398
               

               
Cow position:
               
chr5:58004355-58004600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
159-324
               

               
Cow position:
               
chr5:38379120-38379286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 25
               

               
Conread position:
               
159-343
               

               
Cow position:
               
chr5:31916743-31916924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr5:7552895-7553099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
159-372
               

               
Cow position:
               
chr5:18491530-18491750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
159-377
               

               
Cow position:
               
chr5:28016184-28016407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
159-389
               

               
Cow position:
               
chr5:42676371-42676604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
107, 210
               

               
Conread position:
               
160-343
               

               
Cow position:
               
chr5:75755704-75755885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
160-377
               

               
Cow position:
               
chr5:3441467-3441692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
163-389
               

               
Cow position:
               
chr5:69519732-69519960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
164-339
               

               
Cow position:
               
chr5:32992731-32992908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
164-344
               

               
Cow position:
               
chr5:68593556-68593734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
164-353
               

               
Cow position:
               
chr5:14904947-14904757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 169
               

               
Conread position:
               
165-344
               

               
Cow position:
               
chr5:11437504-11437330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
103, 79
               

               
Conread position:
               
166-342
               

               
Cow position:
               
chr5:41980531-41980702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
166-344
               

               
Cow position:
               
chr5:18250187-18250361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
167-398
               

               
Cow position:
               
chr5:68337379-68337148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
170-367
               

               
Cow position:
               
chr5:14313409-14313607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
171-377
               

               
Cow position:
               
chr5:36724584-36724377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
175, 29
               

               
Conread position:
               
175-340
               

               
Cow position:
               
chr5:54454640-54454805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
175-344
               

               
Cow position:
               
chr5:18901464-18901633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
90, 80
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr5:16207014-16206821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
176-344
               

               
Cow position:
               
chr5:68273704-68273535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
177-343
               

               
Cow position:
               
chr5:39216401-39216568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
180-343
               

               
Cow position:
               
chr5:34637591-34637752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
180-349
               

               
Cow position:
               
chr5:47600917-47601085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
88, 123
               

               
Conread position:
               
180-377
               

               
Cow position:
               
chr5:25496260-25496059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
184-372
               

               
Cow position:
               
chr5:31217245-31217434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 150
               

               
Conread position:
               
186-377
               

               
Cow position:
               
chr5:54868371-54868567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
189-343
               

               
Cow position:
               
chr5:54360963-54360808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
190-377
               

               
Cow position:
               
chr5:52646180-52645992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
194-343
               

               
Cow position:
               
chr5:32081385-32081236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 139
               

               
Conread position:
               
194-343
               

               
Cow position:
               
chr5:43349957-43350107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
195-343
               

               
Cow position:
               
chr5:15477872-15478021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
195-366
               

               
Cow position:
               
chr5:6032138-6032313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 55
               

               
Conread position:
               
200-344
               

               
Cow position:
               
chr5:19780866-19780722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 79
               

               
Conread position:
               
204-342
               

               
Cow position:
               
chr5:742287-742148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
207-338
               

               
Cow position:
               
chr5:65593072-65593203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
213-353
               

               
Cow position:
               
chr5:72345660-72345516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
353-506
               

               
Cow position:
               
chr5:16085633-16085481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
353-510
               

               
Cow position:
               
chr5:53834829-53834985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
447-875
               

               
Cow position:
               
chr5:58855787-58856227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
453-889
               

               
Cow position:
               
chr5:58519708-58519277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
117, 6
               

               
Conread position:
               
474-916
               

               
Cow position:
               
chr5:56070562-56071022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
491-940
               

               
Cow position:
               
chr5:56523901-56524371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
494-889
               

               
Cow position:
               
chr5:47317238-47316835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
497-874
               

               
Cow position:
               
chr5:61600146-61600529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
498-850
               

               
Cow position:
               
chr5:43738218-43737868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
501-883
               

               
Cow position:
               
chr5:21040236-21039850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
502-856
               

               
Cow position:
               
chr5:41609044-41609385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
503-850
               

               
Cow position:
               
chr5:47601556-47601907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
508-760
               

               
Cow position:
               
chr5:23856418-23856160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
509-732
               

               
Cow position:
               
chr5:46294922-46294692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
509-850
               

               
Cow position:
               
chr5:6045031-6045391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
514-851
               

               
Cow position:
               
chr5:21524915-21525255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
515-927
               

               
Cow position:
               
chr5:54350612-54350175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
516-814
               

               
Cow position:
               
chr5:54713989-54713673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
9, 112
               

               
Conread position:
               
516-850
               

               
Cow position:
               
chr5:39447782-39447440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
516-850
               

               
Cow position:
               
chr5:69337581-69337915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
517-890
               

               
Cow position:
               
chr5:24996473-24996083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
88, 271
               

               
Conread position:
               
518-938
               

               
Cow position:
               
chr5:27103038-27102606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 113
               

               
Conread position:
               
519-844
               

               
Cow position:
               
chr5:39094306-39094639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
519-850
               

               
Cow position:
               
chr5:5111326-5110979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
14, 152
               

               
Conread position:
               
520-819
               

               
Cow position:
               
chr5:43474601-43474908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
46, 125
               

               
Conread position:
               
520-851
               

               
Cow position:
               
chr5:24348865-24349203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
52, 121
               

               
Conread position:
               
520-851
               

               
Cow position:
               
chr5:26097051-26097385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 109
               

               
Conread position:
               
520-921
               

               
Cow position:
               
chr5:27007650-27008063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
520-938
               

               
Cow position:
               
chr5:28946305-28945872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 125
               

               
Conread position:
               
524-731
               

               
Cow position:
               
chr5:63917652-63917440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
46, 123
               

               
Conread position:
               
524-734
               

               
Cow position:
               
chr5:34288712-34288497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
524-821
               

               
Cow position:
               
chr5:66338842-66339144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
524-845
               

               
Cow position:
               
chr5:65601218-65601547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
46, 206
               

               
Conread position:
               
524-850
               

               
Cow position:
               
chr5:66257400-66257731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
524-889
               

               
Cow position:
               
chr5:49685523-49685138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
48, 122
               

               
Conread position:
               
524-890
               

               
Cow position:
               
chr5:44054280-44053915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
44, 143
               

               
Conread position:
               
524-916
               

               
Cow position:
               
chr5:65941495-65941087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
524-938
               

               
Cow position:
               
chr5:14314280-14314723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
524-938
               

               
Cow position:
               
chr5:26377909-26377473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
524-938
               

               
Cow position:
               
chr5:62870277-62869856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 118
               

               
Conread position:
               
525-848
               

               
Cow position:
               
chr5:58793856-58793514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 129
               

               
Conread position:
               
526-717
               

               
Cow position:
               
chr5:24642962-24642770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
526-718
               

               
Cow position:
               
chr5:59298199-59298002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 112
               

               
Conread position:
               
526-724
               

               
Cow position:
               
chr5:34922075-34921866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 206
               

               
Conread position:
               
526-724
               

               
Cow position:
               
chr5:50729255-50729464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
526-731
               

               
Cow position:
               
chr5:33467282-33467071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 117
               

               
Conread position:
               
526-732
               

               
Cow position:
               
chr5:56753487-56753700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 115
               

               
Conread position:
               
526-733
               

               
Cow position:
               
chr5:32963869-32963658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
526-739
               

               
Cow position:
               
chr5:2332754-2332532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
526-748
               

               
Cow position:
               
chr5:64844357-64844138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
526-760
               

               
Cow position:
               
chr5:40357111-40356864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 122
               

               
Conread position:
               
526-761
               

               
Cow position:
               
chr5:50950313-50950556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
526-761
               

               
Cow position:
               
chr5:59443491-59443249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 210
               

               
Conread position:
               
526-793
               

               
Cow position:
               
chr5:34915902-34916167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 107
               

               
Conread position:
               
526-802
               

               
Cow position:
               
chr5:37714145-37713848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
526-805
               

               
Cow position:
               
chr5:41523033-41522753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
526-824
               

               
Cow position:
               
chr5:30487008-30487310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
152, 33
               

               
Conread position:
               
526-833
               

               
Cow position:
               
chr5:13691816-13691489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
526-845
               

               
Cow position:
               
chr5:34506166-34505836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
526-845
               

               
Cow position:
               
chr5:40889524-40889207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 187
               

               
Conread position:
               
526-845
               

               
Cow position:
               
chr5:53855464-53855796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
526-846
               

               
Cow position:
               
chr5:25225889-25225550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
526-847
               

               
Cow position:
               
chr5:31469823-31469501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
78, 114
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr5:9894367-9894028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr5:35826350-35826697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr5:37814383-37814721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr5:52645318-52644985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr5:62172177-62172507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
526-850
               

               
Cow position:
               
chr5:65752619-65752955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
526-851
               

               
Cow position:
               
chr5:2309804-2309460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
526-851
               

               
Cow position:
               
chr5:14550826-14550488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
526-864
               

               
Cow position:
               
chr5:34528321-34528656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
526-866
               

               
Cow position:
               
chr5:7397306-7397657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
526-874
               

               
Cow position:
               
chr5:42744557-42744904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
219, 44
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr5:16206382-16206016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr5:37646792-37646405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr5:43858668-43858281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr5:50722810-50723185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
526-889
               

               
Cow position:
               
chr5:54311093-54311475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
526-892
               

               
Cow position:
               
chr5:29827813-29828188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
526-914
               

               
Cow position:
               
chr5:56467464-56467854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
113, 40
               

               
Conread position:
               
526-932
               

               
Cow position:
               
chr5:40711683-40711265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
526-937
               

               
Cow position:
               
chr5:37645832-37646281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 131
               

               
Conread position:
               
526-937
               

               
Cow position:
               
chr5:41334361-41334796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
526-937
               

               
Cow position:
               
chr5:41598939-41598525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
526-938
               

               
Cow position:
               
chr5:39695415-39695839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
526-938
               

               
Cow position:
               
chr5:40928213-40927807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
526-938
               

               
Cow position:
               
chr5:55088905-55089329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
526-938
               

               
Cow position:
               
chr5:56384987-56385401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 208
               

               
Conread position:
               
526-938
               

               
Cow position:
               
chr5:57935354-57934913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
526-938
               

               
Cow position:
               
chr5:65933168-65932773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
526-940
               

               
Cow position:
               
chr5:9499333-9498926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
527-850
               

               
Cow position:
               
chr5:31918414-31918737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 90
               

               
Conread position:
               
527-863
               

               
Cow position:
               
chr5:35209711-35209367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
527-892
               

               
Cow position:
               
chr5:55176651-55177027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
527-938
               

               
Cow position:
               
chr5:1950300-1949870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
528-850
               

               
Cow position:
               
chr5:41164850-41165183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
529-723
               

               
Cow position:
               
chr5:694350-694545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
529-851
               

               
Cow position:
               
chr5:39936866-39937211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
529-889
               

               
Cow position:
               
chr5:458235-458627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 125
               

               
Conread position:
               
529-936
               

               
Cow position:
               
chr5:27419958-27419543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
529-938
               

               
Cow position:
               
chr5:17027861-17028283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
529-938
               

               
Cow position:
               
chr5:48573998-48573593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
530-845
               

               
Cow position:
               
chr5:17063330-17062991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
531-731
               

               
Cow position:
               
chr5:44583353-44583157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
531-755
               

               
Cow position:
               
chr5:72150015-72150244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
531-788
               

               
Cow position:
               
chr5:49820907-49821172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 211
               

               
Conread position:
               
531-797
               

               
Cow position:
               
chr5:29504877-29505153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
531-812
               

               
Cow position:
               
chr5:65924934-65924634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 287
               

               
Conread position:
               
531-818
               

               
Cow position:
               
chr5:3281103-3280810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
531-821
               

               
Cow position:
               
chr5:2500416-2500114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
531-845
               

               
Cow position:
               
chr5:74643896-74643588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
531-850
               

               
Cow position:
               
chr5:16894011-16893676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
41, 172
               

               
Conread position:
               
531-857
               

               
Cow position:
               
chr5:65593646-65593970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
531-889
               

               
Cow position:
               
chr5:11668413-11668046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
531-890
               

               
Cow position:
               
chr5:28224220-28224592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
531-893
               

               
Cow position:
               
chr5:35145117-35145470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
531-938
               

               
Cow position:
               
chr5:6528445-6528871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
44, 197
               

               
Conread position:
               
531-943
               

               
Cow position:
               
chr5:35763055-35763460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
532-889
               

               
Cow position:
               
chr5:4032223-4031847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
532-889
               

               
Cow position:
               
chr5:9090257-9089889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
532-892
               

               
Cow position:
               
chr5:46323046-46322661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
532-893
               

               
Cow position:
               
chr5:26990159-26990531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 98
               

               
Conread position:
               
532-896
               

               
Cow position:
               
chr5:43992091-43992470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
532-908
               

               
Cow position:
               
chr5:37758038-37757680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
533-731
               

               
Cow position:
               
chr5:66831947-66831742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
533-736
               

               
Cow position:
               
chr5:48178909-48178702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
533-785
               

               
Cow position:
               
chr5:42747925-42748180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
533-789
               

               
Cow position:
               
chr5:16184856-16185121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
533-807
               

               
Cow position:
               
chr5:62826986-62826701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
533-812
               

               
Cow position:
               
chr5:27403477-27403173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 258
               

               
Conread position:
               
533-815
               

               
Cow position:
               
chr5:54405128-54404831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
533-838
               

               
Cow position:
               
chr5:34638652-34638967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
533-843
               

               
Cow position:
               
chr5:41951317-41951008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
533-845
               

               
Cow position:
               
chr5:360175-359849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
533-850
               

               
Cow position:
               
chr5:38832884-38833216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 272
               

               
Conread position:
               
533-851
               

               
Cow position:
               
chr5:18573937-18574268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
533-851
               

               
Cow position:
               
chr5:35208028-35208357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
533-851
               

               
Cow position:
               
chr5:61839955-61840284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
533-858
               

               
Cow position:
               
chr5:33661621-33661949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 157
               

               
Conread position:
               
533-873
               

               
Cow position:
               
chr5:41129532-41129865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
533-887
               

               
Cow position:
               
chr5:6683581-6683230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
533-889
               

               
Cow position:
               
chr5:15478880-15479264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
533-889
               

               
Cow position:
               
chr5:44796951-44796594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
533-889
               

               
Cow position:
               
chr5:63987680-63987307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
533-892
               

               
Cow position:
               
chr5:4710375-4710010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
533-892
               

               
Cow position:
               
chr5:44752543-44752165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
533-900
               

               
Cow position:
               
chr5:48144024-48143639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 273
               

               
Conread position:
               
533-932
               

               
Cow position:
               
chr5:34442025-34441598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
533-936
               

               
Cow position:
               
chr5:72007086-72006676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 188
               

               
Conread position:
               
534-845
               

               
Cow position:
               
chr5:33414637-33414321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
534-850
               

               
Cow position:
               
chr5:16508864-16509201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
534-862
               

               
Cow position:
               
chr5:45705815-45706141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 152
               

               
Conread position:
               
534-889
               

               
Cow position:
               
chr5:72045873-72045538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
534-890
               

               
Cow position:
               
chr5:20127822-20128192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
534-898
               

               
Cow position:
               
chr5:45226056-45225669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
534-915
               

               
Cow position:
               
chr5:41636641-41637029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
534-935
               

               
Cow position:
               
chr5:68082199-68081796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
534-940
               

               
Cow position:
               
chr5:28927825-28927414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 304
               

               
Conread position:
               
535-729
               

               
Cow position:
               
chr5:60519935-60520131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
535-805
               

               
Cow position:
               
chr5:34115431-34115702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
535-821
               

               
Cow position:
               
chr5:32956321-32956030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 103
               

               
Conread position:
               
535-845
               

               
Cow position:
               
chr5:47871282-47870952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 273
               

               
Conread position:
               
535-846
               

               
Cow position:
               
chr5:30844881-30845201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
535-884
               

               
Cow position:
               
chr5:51999988-52000352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr5:15598465-15598100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
37, 119
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr5:67932692-67932335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
535-889
               

               
Cow position:
               
chr5:40109270-40109631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
535-889
               

               
Cow position:
               
chr5:42063972-42064344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
535-892
               

               
Cow position:
               
chr5:20779611-20779257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
66, 95
               

               
Conread position:
               
535-912
               

               
Cow position:
               
chr5:11229905-11229512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
37, 266
               

               
Conread position:
               
535-935
               

               
Cow position:
               
chr5:40233902-40234296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
535-938
               

               
Cow position:
               
chr5:40388097-40387694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
535-938
               

               
Cow position:
               
chr5:46611321-46610910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
535-940
               

               
Cow position:
               
chr5:46798021-46798432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
536-761
               

               
Cow position:
               
chr5:27690289-27690055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 111
               

               
Conread position:
               
536-764
               

               
Cow position:
               
chr5:1276705-1276460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
536-850
               

               
Cow position:
               
chr5:31480923-31481243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
536-850
               

               
Cow position:
               
chr5:50821558-50821878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
537-728
               

               
Cow position:
               
chr5:9859947-9859746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 174
               

               
Conread position:
               
537-840
               

               
Cow position:
               
chr5:46122578-46122268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
537-850
               

               
Cow position:
               
chr5:28926414-28926087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
537-850
               

               
Cow position:
               
chr5:32697042-32696728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
537-889
               

               
Cow position:
               
chr5:54086311-54086677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
537-937
               

               
Cow position:
               
chr5:26595332-26594912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
538-886
               

               
Cow position:
               
chr5:19813440-19813083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
66, 103
               

               
Conread position:
               
538-892
               

               
Cow position:
               
chr5:19278920-19278565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
538-936
               

               
Cow position:
               
chr5:71454824-71454426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
539-850
               

               
Cow position:
               
chr5:35684707-35685030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 295
               

               
Conread position:
               
539-850
               

               
Cow position:
               
chr5:45845922-45845596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
539-890
               

               
Cow position:
               
chr5:64823540-64823190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 173
               

               
Conread position:
               
540-849
               

               
Cow position:
               
chr5:55068490-55068800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
540-888
               

               
Cow position:
               
chr5:1247050-1247401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
543-873
               

               
Cow position:
               
chr5:37425520-37425866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
543-875
               

               
Cow position:
               
chr5:5257520-5257163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
543-884
               

               
Cow position:
               
chr5:27306095-27306438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
543-925
               

               
Cow position:
               
chr5:27411613-27411226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
543-938
               

               
Cow position:
               
chr5:48757721-48758128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 143
               

               
Conread position:
               
544-938
               

               
Cow position:
               
chr5:41713094-41713495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
544-943
               

               
Cow position:
               
chr5:741171-740761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
545-739
               

               
Cow position:
               
chr5:37366676-37366881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
545-850
               

               
Cow position:
               
chr5:56028751-56028446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
545-925
               

               
Cow position:
               
chr5:51502791-51503178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
545-938
               

               
Cow position:
               
chr5:24175153-24175558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
545-938
               

               
Cow position:
               
chr5:58320683-58320283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
545-940
               

               
Cow position:
               
chr5:16025682-16025274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
27, 186
               

               
Conread position:
               
546-890
               

               
Cow position:
               
chr5:11427463-11427096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 346
               

               
Conread position:
               
547-938
               

               
Cow position:
               
chr5:39442073-39442484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
16, 127
               

               
Conread position:
               
548-845
               

               
Cow position:
               
chr5:7044929-7044615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
550-810
               

               
Cow position:
               
chr5:49362207-49361938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
551-938
               

               
Cow position:
               
chr5:6572536-6572938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 177
               

               
Conread position:
               
552-905
               

               
Cow position:
               
chr5:71494601-71494975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
553-881
               

               
Cow position:
               
chr5:64758975-64758636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 84
               

               
Conread position:
               
555-714
               

               
Cow position:
               
chr5:66281003-66280838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
555-889
               

               
Cow position:
               
chr5:35969331-35969671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
555-889
               

               
Cow position:
               
chr5:57736907-57737238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
556-938
               

               
Cow position:
               
chr5:18898773-18899164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
556-938
               

               
Cow position:
               
chr5:40039979-40039582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
559-806
               

               
Cow position:
               
chr5:7140312-7140056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
559-845
               

               
Cow position:
               
chr5:29212741-29213028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
559-892
               

               
Cow position:
               
chr5:32378662-32378969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
563-780
               

               
Cow position:
               
chr5:53146088-53145859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
567-851
               

               
Cow position:
               
chr5:57575568-57575869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
570-891
               

               
Cow position:
               
chr5:22643412-22643091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 70
               

               
Conread position:
               
570-937
               

               
Cow position:
               
chr5:29756143-29756523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
571-789
               

               
Cow position:
               
chr5:8994759-8994532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
571-808
               

               
Cow position:
               
chr5:24485619-24485382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
571-850
               

               
Cow position:
               
chr5:3242667-3242386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 225
               

               
Conread position:
               
571-890
               

               
Cow position:
               
chr5:56518403-56518092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
571-891
               

               
Cow position:
               
chr5:34561815-34562157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 234
               

               
Conread position:
               
571-912
               

               
Cow position:
               
chr5:50599864-50600206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 154
               

               
Conread position:
               
573-888
               

               
Cow position:
               
chr5:4220789-4221116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 195
               

               
Conread position:
               
574-724
               

               
Cow position:
               
chr5:35449063-35449217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
574-889
               

               
Cow position:
               
chr5:69461144-69461474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
575-789
               

               
Cow position:
               
chr5:20344967-20345195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
575-884
               

               
Cow position:
               
chr5:62142481-62142810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
575-931
               

               
Cow position:
               
chr5:69731328-69731687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
577-849
               

               
Cow position:
               
chr5:51934999-51935283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
581-889
               

               
Cow position:
               
chr5:37808848-37808524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
584-728
               

               
Cow position:
               
chr5:66281231-66281378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
584-892
               

               
Cow position:
               
chr5:39258353-39258647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
585-921
               

               
Cow position:
               
chr5:31923202-31923544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
138, 23
               

               
Conread position:
               
588-850
               

               
Cow position:
               
chr5:55928766-55929039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
590-845
               

               
Cow position:
               
chr5:33552576-33552333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
604-811
               

               
Cow position:
               
chr5:29980141-29979927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
604-850
               

               
Cow position:
               
chr5:46512922-46512674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
604-850
               

               
Cow position:
               
chr5:56317139-56317384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
604-851
               

               
Cow position:
               
chr5:59115225-59115478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
604-891
               

               
Cow position:
               
chr5:7552574-7552272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
604-925
               

               
Cow position:
               
chr5:23366925-23366590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
604-938
               

               
Cow position:
               
chr5:16214532-16214888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
604-938
               

               
Cow position:
               
chr5:23529432-23529095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
604-938
               

               
Cow position:
               
chr5:47696598-47696253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
120, 37
               

               
Conread position:
               
605-936
               

               
Cow position:
               
chr5:62638751-62639090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
609-938
               

               
Cow position:
               
chr5:29844133-29844468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
610-837
               

               
Cow position:
               
chr5:30629307-30629077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
610-850
               

               
Cow position:
               
chr5:30950069-30949820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
610-892
               

               
Cow position:
               
chr5:14629965-14629673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
611-940
               

               
Cow position:
               
chr5:38629137-38629476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
615-938
               

               
Cow position:
               
chr5:39874977-39875312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
617-789
               

               
Cow position:
               
chr5:7921542-7921371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
618-925
               

               
Cow position:
               
chr5:48405319-48405016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
619-873
               

               
Cow position:
               
chr5:67540343-67540078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 18
               

               
Conread position:
               
623-851
               

               
Cow position:
               
chr5:73168134-73167915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
628-889
               

               
Cow position:
               
chr5:54768041-54767770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
629-850
               

               
Cow position:
               
chr5:44726456-44726239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
631-925
               

               
Cow position:
               
chr5:18553773-18554067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
643-920
               

               
Cow position:
               
chr5:60747394-60747118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
643-940
               

               
Cow position:
               
chr5:16179643-16179314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
644-851
               

               
Cow position:
               
chr5:33560851-33560638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
644-919
               

               
Cow position:
               
chr5:6891135-6890854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
83, 155
               

               
Conread position:
               
648-892
               

               
Cow position:
               
chr5:13717684-13717429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
648-901
               

               
Cow position:
               
chr5:4927680-4927416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 242
               

               
Conread position:
               
649-888
               

               
Cow position:
               
chr5:58446691-58446945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
651-893
               

               
Cow position:
               
chr5:23678814-23678560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 179
               

               
Conread position:
               
654-858
               

               
Cow position:
               
chr5:56635793-56635998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
663-938
               

               
Cow position:
               
chr5:35785074-35784799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
664-850
               

               
Cow position:
               
chr5:23357238-23357424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 156
               

               
Conread position:
               
667-889
               

               
Cow position:
               
chr5:30805074-30805303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
670-875
               

               
Cow position:
               
chr5:46129752-46129546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
670-940
               

               
Cow position:
               
chr5:50575694-50575978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
671-889
               

               
Cow position:
               
chr5:47323375-47323601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 123
               

               
Conread position:
               
673-940
               

               
Cow position:
               
chr5:17267983-17267704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 263
               

               
Conread position:
               
676-942
               

               
Cow position:
               
chr5:42782802-42782533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
152, 50
               

               
Conread position:
               
681-890
               

               
Cow position:
               
chr5:29515570-29515365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
687-936
               

               
Cow position:
               
chr5:15482969-15483221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
687-940
               

               
Cow position:
               
chr5:28035668-28035933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
691-940
               

               
Cow position:
               
chr5:38738729-38738972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
695-936
               

               
Cow position:
               
chr5:56153551-56153804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
705-938
               

               
Cow position:
               
chr5:66189931-66190172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
710-940
               

               
Cow position:
               
chr5:25681392-25681171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
713-943
               

               
Cow position:
               
chr5:34914602-34914360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 227
               

               
Conread position:
               
723-937
               

               
Cow position:
               
chr5:48178424-48178195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
743-938
               

               
Cow position:
               
chr5:38717298-38717502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
747-925
               

               
Cow position:
               
chr5:21531113-21530930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
750-936
               

               
Cow position:
               
chr5:23527637-23527444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
759-940
               

               
Cow position:
               
chr5:4267673-4267869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
778-936
               

               
Cow position:
               
chr5:53145730-53145562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
792-938
               

               
Cow position:
               
chr5:61647288-61647140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
795-946
               

               
Cow position:
               
chr5:42049724-42049879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
832-937
               

               
Cow position:
               
chr5:13890545-13890655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               
Show alignments to all cow chromosomes.