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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8025C15.5
        

               
Conread position:
               
636-995
               

               
Cow position:
               
chr15:5726585-5726216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
644-916
               

               
Cow position:
               
chr15:39082454-39082191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
133, 34
               

               
Conread position:
               
646-944
               

               
Cow position:
               
chr15:37931513-37931809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 23
               

               
Conread position:
               
646-996
               

               
Cow position:
               
chr15:35112626-35112973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 187
               

               
Conread position:
               
647-887
               

               
Cow position:
               
chr15:24305231-24305474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
647-989
               

               
Cow position:
               
chr15:794766-795110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
647-989
               

               
Cow position:
               
chr15:1329852-1330202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
117, 128
               

               
Conread position:
               
647-993
               

               
Cow position:
               
chr15:36888074-36887742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
648-777
               

               
Cow position:
               
chr15:41583160-41583029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
648-791
               

               
Cow position:
               
chr15:11646238-11646381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 138
               

               
Conread position:
               
648-814
               

               
Cow position:
               
chr15:21523037-21522869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
648-821
               

               
Cow position:
               
chr15:5715802-5715627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
648-828
               

               
Cow position:
               
chr15:6586467-6586648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
116, 101
               

               
Conread position:
               
648-845
               

               
Cow position:
               
chr15:38103644-38103833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
648-874
               

               
Cow position:
               
chr15:13387329-13387097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 188
               

               
Conread position:
               
648-874
               

               
Cow position:
               
chr15:22531311-22531096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
116, 87
               

               
Conread position:
               
648-875
               

               
Cow position:
               
chr15:12655662-12655897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
648-875
               

               
Cow position:
               
chr15:13515618-13515385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
648-875
               

               
Cow position:
               
chr15:50322845-50322613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
648-890
               

               
Cow position:
               
chr15:41360716-41360946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
139, 14
               

               
Conread position:
               
648-896
               

               
Cow position:
               
chr15:6905311-6905076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
152, 55
               

               
Conread position:
               
648-900
               

               
Cow position:
               
chr15:4535157-4534905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
648-900
               

               
Cow position:
               
chr15:24128276-24128025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
648-903
               

               
Cow position:
               
chr15:26404524-26404274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
116, 84
               

               
Conread position:
               
648-919
               

               
Cow position:
               
chr15:16307662-16307397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 101
               

               
Conread position:
               
648-919
               

               
Cow position:
               
chr15:29340313-29340033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
120, 90
               

               
Conread position:
               
648-919
               

               
Cow position:
               
chr15:53045629-53045902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
648-920
               

               
Cow position:
               
chr15:33625199-33624931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
160, 9
               

               
Conread position:
               
648-921
               

               
Cow position:
               
chr15:21388918-21389190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
648-924
               

               
Cow position:
               
chr15:16604072-16603795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
648-935
               

               
Cow position:
               
chr15:50302433-50302144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
132, 281
               

               
Conread position:
               
648-938
               

               
Cow position:
               
chr15:42788904-42789193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
149, 19
               

               
Conread position:
               
648-939
               

               
Cow position:
               
chr15:10336005-10335712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
648-939
               

               
Cow position:
               
chr15:22871856-22871572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 141
               

               
Conread position:
               
648-947
               

               
Cow position:
               
chr15:6530597-6530898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
648-967
               

               
Cow position:
               
chr15:14505675-14505366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
116, 100
               

               
Conread position:
               
648-987
               

               
Cow position:
               
chr15:31857838-31857498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
152, 120
               

               
Conread position:
               
648-987
               

               
Cow position:
               
chr15:38394670-38394336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 140
               

               
Conread position:
               
648-988
               

               
Cow position:
               
chr15:44658607-44658274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 172
               

               
Conread position:
               
648-989
               

               
Cow position:
               
chr15:4296014-4295666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 90
               

               
Conread position:
               
648-989
               

               
Cow position:
               
chr15:14870992-14870662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 73
               

               
Conread position:
               
648-989
               

               
Cow position:
               
chr15:25208519-25208852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
209, 70
               

               
Conread position:
               
648-989
               

               
Cow position:
               
chr15:26919028-26919362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 48
               

               
Conread position:
               
648-992
               

               
Cow position:
               
chr15:21894032-21893684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 251
               

               
Conread position:
               
648-992
               

               
Cow position:
               
chr15:47042391-47042739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
116, 41
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:275893-275546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:3700036-3700380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:4861664-4862004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:5420636-5420979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:11011355-11011690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
114, 138
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:11559107-11559449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:11658319-11658680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:11995776-11996125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 137
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:12304891-12304542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 240
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:16667253-16667595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
116, 79
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:16823187-16822853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 233
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:17233443-17233089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:22532487-22532156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:24968043-24967704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:24994271-24994608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
150, 69
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:25907158-25906821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
116, 49
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:26896465-26896796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
202, 70
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:36435456-36435105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:40957827-40957481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 70
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:41125321-41125654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
115, 240
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:43030775-43031123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 152
               

               
Conread position:
               
648-993
               

               
Cow position:
               
chr15:47843861-47844185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
208, 72
               

               
Conread position:
               
648-994
               

               
Cow position:
               
chr15:1804082-1804431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
648-995
               

               
Cow position:
               
chr15:43827524-43827871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
162, 173
               

               
Conread position:
               
648-997
               

               
Cow position:
               
chr15:18671204-18671550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
118, 18
               

               
Conread position:
               
648-1001
               

               
Cow position:
               
chr15:20459050-20459416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
49, 176
               

               
Conread position:
               
648-1002
               

               
Cow position:
               
chr15:10608056-10608415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
116, 156
               

               
Conread position:
               
648-1002
               

               
Cow position:
               
chr15:17763156-17762804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
648-1003
               

               
Cow position:
               
chr15:225554-225910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
648-1004
               

               
Cow position:
               
chr15:17084458-17084098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
648-1004
               

               
Cow position:
               
chr15:19771381-19771029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
648-1004
               

               
Cow position:
               
chr15:43913838-43914206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
49, 125
               

               
Conread position:
               
648-1004
               

               
Cow position:
               
chr15:51427573-51427934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 237
               

               
Conread position:
               
648-1005
               

               
Cow position:
               
chr15:32323955-32324319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
648-1008
               

               
Cow position:
               
chr15:33643340-33642978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
649-820
               

               
Cow position:
               
chr15:15707862-15708037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
649-821
               

               
Cow position:
               
chr15:23703024-23702855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 122
               

               
Conread position:
               
649-822
               

               
Cow position:
               
chr15:23486920-23487093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
115, 41
               

               
Conread position:
               
649-874
               

               
Cow position:
               
chr15:9871165-9871395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
649-876
               

               
Cow position:
               
chr15:24044850-24045083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
115, 95
               

               
Conread position:
               
649-897
               

               
Cow position:
               
chr15:26117754-26117521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
649-908
               

               
Cow position:
               
chr15:5730189-5729926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
649-930
               

               
Cow position:
               
chr15:39599691-39599411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
649-939
               

               
Cow position:
               
chr15:46868464-46868761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
115, 8
               

               
Conread position:
               
649-947
               

               
Cow position:
               
chr15:40999820-41000123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
649-977
               

               
Cow position:
               
chr15:21908184-21907862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
115, 138
               

               
Conread position:
               
649-979
               

               
Cow position:
               
chr15:19186370-19186701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
649-989
               

               
Cow position:
               
chr15:25666972-25667318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
649-989
               

               
Cow position:
               
chr15:38837995-38837651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
649-989
               

               
Cow position:
               
chr15:39598491-39598152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 270
               

               
Conread position:
               
649-992
               

               
Cow position:
               
chr15:245025-244686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
649-992
               

               
Cow position:
               
chr15:30986040-30986382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
649-993
               

               
Cow position:
               
chr15:85000-85343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 134
               

               
Conread position:
               
649-993
               

               
Cow position:
               
chr15:1083127-1083467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 141
               

               
Conread position:
               
649-993
               

               
Cow position:
               
chr15:7456946-7456620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
115, 213
               

               
Conread position:
               
649-993
               

               
Cow position:
               
chr15:10456764-10457125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
649-993
               

               
Cow position:
               
chr15:16261562-16261233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
649-993
               

               
Cow position:
               
chr15:20370208-20370549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
112, 135
               

               
Conread position:
               
649-993
               

               
Cow position:
               
chr15:20391027-20391374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
649-993
               

               
Cow position:
               
chr15:30047294-30047651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
115, 263
               

               
Conread position:
               
649-993
               

               
Cow position:
               
chr15:36259351-36259694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 261
               

               
Conread position:
               
649-995
               

               
Cow position:
               
chr15:23275783-23275434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 60
               

               
Conread position:
               
649-996
               

               
Cow position:
               
chr15:23696662-23697002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 131
               

               
Conread position:
               
649-1001
               

               
Cow position:
               
chr15:21608475-21608828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
649-1002
               

               
Cow position:
               
chr15:5234755-5235096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 95
               

               
Conread position:
               
649-1008
               

               
Cow position:
               
chr15:26079115-26079458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 69
               

               
Conread position:
               
650-841
               

               
Cow position:
               
chr15:40009402-40009598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
650-854
               

               
Cow position:
               
chr15:38877059-38877261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
650-987
               

               
Cow position:
               
chr15:16112649-16112303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
650-989
               

               
Cow position:
               
chr15:20082004-20081681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
150, 87
               

               
Conread position:
               
650-989
               

               
Cow position:
               
chr15:30001933-30001603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
650-989
               

               
Cow position:
               
chr15:46563246-46563570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
207, 38
               

               
Conread position:
               
650-1004
               

               
Cow position:
               
chr15:35642268-35641904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 122
               

               
Conread position:
               
651-921
               

               
Cow position:
               
chr15:34206942-34207214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 173
               

               
Conread position:
               
651-989
               

               
Cow position:
               
chr15:43626713-43626372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
651-993
               

               
Cow position:
               
chr15:6970230-6969890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
651-993
               

               
Cow position:
               
chr15:17100463-17100801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
651-993
               

               
Cow position:
               
chr15:21821678-21822024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
652-902
               

               
Cow position:
               
chr15:3726364-3726116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 42
               

               
Conread position:
               
652-992
               

               
Cow position:
               
chr15:8354289-8353945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 276
               

               
Conread position:
               
652-993
               

               
Cow position:
               
chr15:16543212-16543535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
170, 66
               

               
Conread position:
               
652-993
               

               
Cow position:
               
chr15:22531902-22531576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 64
               

               
Conread position:
               
652-993
               

               
Cow position:
               
chr15:37381873-37381532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
652-1003
               

               
Cow position:
               
chr15:38883398-38883034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 182
               

               
Conread position:
               
653-987
               

               
Cow position:
               
chr15:22938526-22938858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
654-993
               

               
Cow position:
               
chr15:1722607-1722938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
110, 90
               

               
Conread position:
               
657-917
               

               
Cow position:
               
chr15:49258103-49257841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
199, 90
               

               
Conread position:
               
657-989
               

               
Cow position:
               
chr15:286719-286379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
107, 41
               

               
Conread position:
               
661-997
               

               
Cow position:
               
chr15:34896999-34896660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
71, 222
               

               
Conread position:
               
663-912
               

               
Cow position:
               
chr15:4093698-4093951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
664-989
               

               
Cow position:
               
chr15:9879162-9879473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
188, 57
               

               
Conread position:
               
664-993
               

               
Cow position:
               
chr15:10245772-10246092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
222, 22
               

               
Conread position:
               
664-993
               

               
Cow position:
               
chr15:29810348-29810028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
667-921
               

               
Cow position:
               
chr15:12870633-12870891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
667-938
               

               
Cow position:
               
chr15:13554585-13554307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
667-987
               

               
Cow position:
               
chr15:33306340-33306029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
114, 93
               

               
Conread position:
               
668-993
               

               
Cow position:
               
chr15:14576564-14576233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
669-939
               

               
Cow position:
               
chr15:29331232-29330960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 39
               

               
Conread position:
               
669-970
               

               
Cow position:
               
chr15:17337587-17337295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
131, 99
               

               
Conread position:
               
669-987
               

               
Cow position:
               
chr15:36353897-36353578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 75
               

               
Conread position:
               
669-993
               

               
Cow position:
               
chr15:4418172-4418499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
669-993
               

               
Cow position:
               
chr15:17870057-17870389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
93, 115
               

               
Conread position:
               
669-1003
               

               
Cow position:
               
chr15:53716661-53716327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
109, 80
               

               
Conread position:
               
669-1004
               

               
Cow position:
               
chr15:22939096-22939432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
105, 159
               

               
Conread position:
               
673-986
               

               
Cow position:
               
chr15:2380581-2380275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 177
               

               
Conread position:
               
673-987
               

               
Cow position:
               
chr15:24981968-24982270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 93
               

               
Conread position:
               
673-993
               

               
Cow position:
               
chr15:11987184-11987506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
673-993
               

               
Cow position:
               
chr15:49274176-49273865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
91, 107
               

               
Conread position:
               
676-992
               

               
Cow position:
               
chr15:1503126-1502817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
676-993
               

               
Cow position:
               
chr15:23115064-23114735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 152
               

               
Conread position:
               
677-993
               

               
Cow position:
               
chr15:18975545-18975860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
678-993
               

               
Cow position:
               
chr15:30470750-30471076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
683-993
               

               
Cow position:
               
chr15:51307465-51307767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
81, 200
               

               
Conread position:
               
691-1003
               

               
Cow position:
               
chr15:5158581-5158264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 93
               

               
Conread position:
               
691-1003
               

               
Cow position:
               
chr15:34284205-34284516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 53
               

               
Conread position:
               
691-1004
               

               
Cow position:
               
chr15:22930138-22930458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 193
               

               
Conread position:
               
698-1003
               

               
Cow position:
               
chr15:49784091-49784388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
699-922
               

               
Cow position:
               
chr15:48710855-48711082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
701-989
               

               
Cow position:
               
chr15:12785620-12785336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
701-1000
               

               
Cow position:
               
chr15:14888444-14888741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
63, 206
               

               
Conread position:
               
708-1005
               

               
Cow position:
               
chr15:40379401-40379103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
723-989
               

               
Cow position:
               
chr15:13432668-13432389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
725-993
               

               
Cow position:
               
chr15:10442331-10442608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
726-921
               

               
Cow position:
               
chr15:16908603-16908406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
730-993
               

               
Cow position:
               
chr15:36846007-36846284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
734-1003
               

               
Cow position:
               
chr15:41056041-41056316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
739-940
               

               
Cow position:
               
chr15:26718762-26718965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 178
               

               
Conread position:
               
739-992
               

               
Cow position:
               
chr15:49132206-49131963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 44
               

               
Conread position:
               
741-984
               

               
Cow position:
               
chr15:13395707-13395460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
741-993
               

               
Cow position:
               
chr15:36952043-36952296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 145
               

               
Conread position:
               
742-993
               

               
Cow position:
               
chr15:3695790-3695540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 171
               

               
Conread position:
               
745-923
               

               
Cow position:
               
chr15:78726-78545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
745-927
               

               
Cow position:
               
chr15:44237571-44237384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
750-930
               

               
Cow position:
               
chr15:34751233-34751054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
766-993
               

               
Cow position:
               
chr15:21903281-21903504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
772-993
               

               
Cow position:
               
chr15:27063394-27063614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
786-1008
               

               
Cow position:
               
chr15:26442327-26442102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
793-993
               

               
Cow position:
               
chr15:50333085-50332878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
802-1001
               

               
Cow position:
               
chr15:49483723-49483519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
804-993
               

               
Cow position:
               
chr15:11908858-11909044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
806-974
               

               
Cow position:
               
chr15:34223957-34223787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
810-1002
               

               
Cow position:
               
chr15:36422699-36422512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
46, 95
               

               
Conread position:
               
813-993
               

               
Cow position:
               
chr15:28099196-28099015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 117
               
Show alignments to all cow chromosomes.