Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8025C15.5
        

               Conread position:
               625-993
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               628-1002
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               634-993
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               638-993
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 10
               

               Conread position:
               641-993
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               207, 57
               

               Conread position:
               644-993
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 70
               

               Conread position:
               646-993
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               647-935
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               115, 153
               

               Conread position:
               647-938
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 65
               

               Conread position:
               648-771
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               648-838
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               648-856
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               648-875
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               114, 79
               

               Conread position:
               648-877
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               125, 70
               

               Conread position:
               648-890
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 101
               

               Conread position:
               648-911
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               116, 235
               

               Conread position:
               648-923
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               648-924
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               648-930
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 133
               

               Conread position:
               648-934
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               648-939
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               85, 46
               

               Conread position:
               648-939
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               75, 69
               

               Conread position:
               648-940
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               648-946
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               116, 255
               

               Conread position:
               648-947
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               114, 132
               

               Conread position:
               648-974
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 29
               

               Conread position:
               648-989
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               648-989
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               648-989
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               648-993
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 96
               

               Conread position:
               648-993
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 134
               

               Conread position:
               648-993
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 90
               

               Conread position:
               648-993
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               124, 19
               

               Conread position:
               648-993
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 233
               

               Conread position:
               648-993
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               648-993
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               648-993
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               153, 70
               

               Conread position:
               648-995
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 139
               

               Conread position:
               648-1000
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               116, 154
               

               Conread position:
               648-1001
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 56
               

               Conread position:
               648-1003
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               252
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               152, 47
               

               Conread position:
               648-1003
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 70
               

               Conread position:
               648-1003
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               125, 279
               

               Conread position:
               648-1005
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 103
               

               Conread position:
               648-1006
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 42
               

               Conread position:
               649-789
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               649-923
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               649-970
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               115, 37
               

               Conread position:
               649-996
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 69
               

               Conread position:
               649-1000
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 62
               

               Conread position:
               650-819
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               75, 68
               

               Conread position:
               651-875
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               171, 23
               

               Conread position:
               651-993
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               41, 179
               

               Conread position:
               651-995
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               41, 138
               

               Conread position:
               651-996
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               651-997
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 17
               

               Conread position:
               651-1008
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               113, 138
               

               Conread position:
               652-900
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               108, 59
               

               Conread position:
               652-993
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               16, 12
               

               Conread position:
               655-993
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               109, 6
               

               Conread position:
               661-938
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               103, 25
               

               Conread position:
               665-992
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               146, 108
               

               Conread position:
               667-992
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               668-921
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               30, 118
               

               Conread position:
               669-859
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               102, 90
               

               Conread position:
               669-1001
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 230
               

               Conread position:
               676-819
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 18
               

               Conread position:
               676-881
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               676-989
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               676-1008
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               677-820
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               678-993
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 90
               

               Conread position:
               680-1004
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 37
               

               Conread position:
               684-992
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               685-989
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               685-1001
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               79, 199
               

               Conread position:
               686-947
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               691-992
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 84
               

               Conread position:
               695-989
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               69, 90
               

               Conread position:
               708-1003
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               723-993
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               43, 64
               

               Conread position:
               728-993
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 42
               

               Conread position:
               738-992
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 182
               

               Conread position:
               740-1005
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               746-1001
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               748-1003
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               751-993
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 163
               

               Conread position:
               757-1003
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               770-992
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               22, 137
               

               Conread position:
               780-1005
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 144
               

               Conread position:
               787-947
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 129
               

               Conread position:
               806-992
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               810-993
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 100
               
Show alignments to all cow chromosomes.