Cow genome map

Conread name: Ss1.1-Pig4-TMW8025C15.5

Conread position: 625-993
Cow position: chr26:20769687-20770053 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 95

Conread position: 628-1002
Cow position: chr26:22349175-22348797 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 246
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 21

Conread position: 634-993
Cow position: chr26:12964855-12964479 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 638-993
Cow position: chr26:23848954-23848593 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 10

Conread position: 641-993
Cow position: chr26:10764072-10764417 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 207, 57

Conread position: 644-993
Cow position: chr26:9535370-9535716 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 70

Conread position: 646-993
Cow position: chr26:34060190-34060538 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 224
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 17

Conread position: 647-935
Cow position: chr26:17148559-17148848 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 115, 153

Conread position: 647-938
Cow position: chr26:8700191-8699897 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 65

Conread position: 648-771
Cow position: chr26:1329401-1329523 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 648-838
Cow position: chr26:13706148-13705950 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 648-856
Cow position: chr26:5306992-5307208 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 0

Conread position: 648-875
Cow position: chr26:32652870-32652647 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 79

Conread position: 648-877
Cow position: chr26:20129815-20129588 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 70

Conread position: 648-890
Cow position: chr26:15200662-15200414 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 101

Conread position: 648-911
Cow position: chr26:34847598-34847867 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 116, 235

Conread position: 648-923
Cow position: chr26:33567187-33566909 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 20

Conread position: 648-924
Cow position: chr26:8642802-8643076 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 16

Conread position: 648-930
Cow position: chr26:22354269-22354557 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 133

Conread position: 648-934
Cow position: chr26:23315626-23315923 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 116, 0

Conread position: 648-939
Cow position: chr26:14175136-14175433 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 85, 46

Conread position: 648-939
Cow position: chr26:31605262-31605558 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 75, 69

Conread position: 648-940
Cow position: chr26:19774444-19774147 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 21

Conread position: 648-946
Cow position: chr26:23583090-23582791 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 116, 255

Conread position: 648-947
Cow position: chr26:13021289-13020989 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 114, 132

Conread position: 648-974
Cow position: chr26:32670633-32670315 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 213
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 29

Conread position: 648-989
Cow position: chr26:22249622-22249291 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 140

Conread position: 648-989
Cow position: chr26:22892588-22892249 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 75

Conread position: 648-989
Cow position: chr26:27491645-27491297 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 648-993
Cow position: chr26:9491782-9492121 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 96

Conread position: 648-993
Cow position: chr26:14174156-14174506 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 134

Conread position: 648-993
Cow position: chr26:16783680-16784027 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 90

Conread position: 648-993
Cow position: chr26:17057542-17057877 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 223
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 19

Conread position: 648-993
Cow position: chr26:23001185-23000835 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 221
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 233

Conread position: 648-993
Cow position: chr26:25526106-25526449 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 105, 21

Conread position: 648-993
Cow position: chr26:28251003-28251356 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 16

Conread position: 648-993
Cow position: chr26:33202199-33201868 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 235
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 153, 70

Conread position: 648-995
Cow position: chr26:32898015-32897675 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 139

Conread position: 648-1000
Cow position: chr26:33112526-33112176 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 240
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 116, 154

Conread position: 648-1001
Cow position: chr26:26888274-26887927 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 56

Conread position: 648-1003
Cow position: chr26:8307655-8307314 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 152, 47

Conread position: 648-1003
Cow position: chr26:20291826-20291480 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 70

Conread position: 648-1003
Cow position: chr26:25393887-25394259 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 246
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 125, 279

Conread position: 648-1005
Cow position: chr26:6794000-6794366 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 243
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 103

Conread position: 648-1006
Cow position: chr26:13801971-13802324 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 42

Conread position: 649-789
Cow position: chr26:9867260-9867121 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 649-923
Cow position: chr26:34108619-34108892 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 182
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 97

Conread position: 649-970
Cow position: chr26:33736693-33736376 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 115, 37

Conread position: 649-996
Cow position: chr26:12145262-12144911 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 69

Conread position: 649-1000
Cow position: chr26:19445984-19446346 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 62

Conread position: 650-819
Cow position: chr26:31572110-31572274 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 68

Conread position: 651-875
Cow position: chr26:16721727-16721951 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 171, 23

Conread position: 651-993
Cow position: chr26:20260436-20260784 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 179

Conread position: 651-995
Cow position: chr26:31633585-31633936 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 231
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 138

Conread position: 651-996
Cow position: chr26:4854392-4854749 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 236
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 71

Conread position: 651-997
Cow position: chr26:21242962-21243293 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 17

Conread position: 651-1008
Cow position: chr26:16549844-16550205 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 113, 138

Conread position: 652-900
Cow position: chr26:21637173-21636925 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 59

Conread position: 652-993
Cow position: chr26:647860-647520 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 12

Conread position: 655-993
Cow position: chr26:26950581-26950259 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 109, 6

Conread position: 661-938
Cow position: chr26:19110054-19110331 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 25

Conread position: 665-992
Cow position: chr26:8811003-8811332 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 146, 108

Conread position: 667-992
Cow position: chr26:31856578-31856909 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 62

Conread position: 668-921
Cow position: chr26:22152101-22152360 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 118

Conread position: 669-859
Cow position: chr26:10747749-10747563 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 90

Conread position: 669-1001
Cow position: chr26:14905934-14905606 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 217
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 230

Conread position: 676-819
Cow position: chr26:8341339-8341483 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 18

Conread position: 676-881
Cow position: chr26:18651750-18651543 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 88, 0

Conread position: 676-989
Cow position: chr26:33253437-33253118 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 117

Conread position: 676-1008
Cow position: chr26:23671298-23671640 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 218
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 5

Conread position: 677-820
Cow position: chr26:35302344-35302195 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 678-993
Cow position: chr26:6714407-6714096 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 90

Conread position: 680-1004
Cow position: chr26:31137561-31137252 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 37

Conread position: 684-992
Cow position: chr26:32565908-32566211 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 27

Conread position: 685-989
Cow position: chr26:34724982-34724676 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 54

Conread position: 685-1001
Cow position: chr26:24240569-24240895 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 199

Conread position: 686-947
Cow position: chr26:678084-677824 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 78, 15

Conread position: 691-992
Cow position: chr26:4807461-4807759 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 84

Conread position: 695-989
Cow position: chr26:7687337-7687044 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 90

Conread position: 708-1003
Cow position: chr26:23924764-23925056 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 57, 17

Conread position: 723-993
Cow position: chr26:14481622-14481364 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 64

Conread position: 728-993
Cow position: chr26:20825173-20824920 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 42

Conread position: 738-992
Cow position: chr26:19591428-19591680 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 182

Conread position: 740-1005
Cow position: chr26:28423234-28423500 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 48

Conread position: 746-1001
Cow position: chr26:12940359-12940618 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 54, 16

Conread position: 748-1003
Cow position: chr26:5836864-5836605 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 22

Conread position: 751-993
Cow position: chr26:19636249-19636492 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 163

Conread position: 757-1003
Cow position: chr26:7314584-7314841 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 770-992
Cow position: chr26:34611204-34610985 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 137

Conread position: 780-1005
Cow position: chr26:11875233-11875008 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 144

Conread position: 787-947
Cow position: chr26:33241884-33242045 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 129

Conread position: 806-992
Cow position: chr26:13863019-13862837 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 810-993
Cow position: chr26:15132656-15132843 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 100

Show alignments to all cow chromosomes.