Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025C15.5 |
| Conread position: | 643-993 |
| Cow position: | chr27:26428010-26428358 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 55, 122 |
| Conread position: | 646-992 |
| Cow position: | chr27:27694653-27695004 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 118, 32 |
| Conread position: | 647-993 |
| Cow position: | chr27:15454326-15453983 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 117, 20 |
| Conread position: | 648-798 |
| Cow position: | chr27:28164289-28164436 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 648-821 |
| Cow position: | chr27:30551113-30550938 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 7 |
| Conread position: | 648-836 |
| Cow position: | chr27:154482-154291 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 648-866 |
| Cow position: | chr27:20789260-20789484 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 116, 90 |
| Conread position: | 648-869 |
| Cow position: | chr27:20553834-20553624 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 648-872 |
| Cow position: | chr27:30792823-30793044 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 648-873 |
| Cow position: | chr27:12429520-12429295 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 648-874 |
| Cow position: | chr27:4829686-4829924 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 116, 63 |
| Conread position: | 648-874 |
| Cow position: | chr27:29312556-29312787 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 648-875 |
| Cow position: | chr27:23472369-23472145 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 116, 71 |
| Conread position: | 648-890 |
| Cow position: | chr27:18593384-18593144 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 152, 81 |
| Conread position: | 648-903 |
| Cow position: | chr27:1498434-1498173 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 648-903 |
| Cow position: | chr27:24014623-24014881 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 648-910 |
| Cow position: | chr27:1123148-1122883 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 143, 120 |
| Conread position: | 648-919 |
| Cow position: | chr27:19647822-19648100 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 183 |
| Conread position: | 648-920 |
| Cow position: | chr27:24321303-24321031 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 152, 222 |
| Conread position: | 648-921 |
| Cow position: | chr27:23882260-23882527 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 648-921 |
| Cow position: | chr27:27038722-27038997 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 648-924 |
| Cow position: | chr27:20549591-20549871 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 116, 86 |
| Conread position: | 648-931 |
| Cow position: | chr27:25277258-25276973 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 101 |
| Conread position: | 648-939 |
| Cow position: | chr27:6074038-6073752 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 76, 115 |
| Conread position: | 648-939 |
| Cow position: | chr27:7212600-7212888 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 648-939 |
| Cow position: | chr27:16589599-16589877 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 199, 16 |
| Conread position: | 648-939 |
| Cow position: | chr27:20795904-20795616 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 648-939 |
| Cow position: | chr27:26426322-26426038 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 69 |
| Conread position: | 648-945 |
| Cow position: | chr27:27136402-27136701 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 125, 249 |
| Conread position: | 648-947 |
| Cow position: | chr27:20757930-20758216 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 648-947 |
| Cow position: | chr27:27640878-27641197 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 258 |
| Conread position: | 648-962 |
| Cow position: | chr27:22418651-22418963 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 125, 35 |
| Conread position: | 648-986 |
| Cow position: | chr27:6541746-6541412 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 114, 138 |
| Conread position: | 648-988 |
| Cow position: | chr27:14670267-14670605 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 141 |
| Conread position: | 648-989 |
| Cow position: | chr27:427086-426744 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 112 |
| Conread position: | 648-989 |
| Cow position: | chr27:22220667-22220324 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 124, 45 |
| Conread position: | 648-989 |
| Cow position: | chr27:24446041-24446364 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 648-989 |
| Cow position: | chr27:26489788-26490131 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 114, 251 |
| Conread position: | 648-989 |
| Cow position: | chr27:26509043-26509382 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 48, 134 |
| Conread position: | 648-989 |
| Cow position: | chr27:27388907-27389253 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 113, 35 |
| Conread position: | 648-989 |
| Cow position: | chr27:29431574-29431250 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 152, 73 |
| Conread position: | 648-992 |
| Cow position: | chr27:2957518-2957188 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 140, 89 |
| Conread position: | 648-992 |
| Cow position: | chr27:18739505-18739145 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 648-992 |
| Cow position: | chr27:26865003-26865337 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 114, 96 |
| Conread position: | 648-992 |
| Cow position: | chr27:26999302-26999652 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 648-993 |
| Cow position: | chr27:6500178-6499828 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 648-993 |
| Cow position: | chr27:7412496-7412164 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 175, 64 |
| Conread position: | 648-993 |
| Cow position: | chr27:13638875-13639217 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 648-993 |
| Cow position: | chr27:14343349-14343665 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 207, 125 |
| Conread position: | 648-993 |
| Cow position: | chr27:15668653-15669004 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 648-993 |
| Cow position: | chr27:16103921-16103581 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 19 |
| Conread position: | 648-993 |
| Cow position: | chr27:16705364-16705023 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 648-993 |
| Cow position: | chr27:16786940-16786601 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 93 |
| Conread position: | 648-993 |
| Cow position: | chr27:17331616-17331262 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 116, 183 |
| Conread position: | 648-993 |
| Cow position: | chr27:17397333-17397681 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 262 |
| Conread position: | 648-993 |
| Cow position: | chr27:22035260-22035601 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 116, 90 |
| Conread position: | 648-993 |
| Cow position: | chr27:22547291-22547618 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 648-993 |
| Cow position: | chr27:23554206-23554559 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 648-993 |
| Cow position: | chr27:26433698-26434043 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 116, 45 |
| Conread position: | 648-993 |
| Cow position: | chr27:27460458-27460808 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 152, 131 |
| Conread position: | 648-993 |
| Cow position: | chr27:27856447-27856109 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 13 |
| Conread position: | 648-993 |
| Cow position: | chr27:28206911-28206574 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 114, 70 |
| Conread position: | 648-993 |
| Cow position: | chr27:28931674-28932032 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 43, 278 |
| Conread position: | 648-993 |
| Cow position: | chr27:30890404-30890071 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 120 |
| Conread position: | 648-997 |
| Cow position: | chr27:26239142-26238790 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 90 |
| Conread position: | 648-1000 |
| Cow position: | chr27:15408926-15409262 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 116, 62 |
| Conread position: | 648-1000 |
| Cow position: | chr27:16284586-16284251 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 116, 90 |
| Conread position: | 648-1001 |
| Cow position: | chr27:8168312-8168660 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 43, 140 |
| Conread position: | 648-1003 |
| Cow position: | chr27:21669007-21669353 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 155, 16 |
| Conread position: | 648-1003 |
| Cow position: | chr27:28496261-28496611 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 64, 116 |
| Conread position: | 648-1004 |
| Cow position: | chr27:20354698-20354359 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 648-1004 |
| Cow position: | chr27:22513561-22513922 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 648-1004 |
| Cow position: | chr27:30871942-30872298 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 648-1005 |
| Cow position: | chr27:19388131-19387777 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 112 |
| Conread position: | 648-1006 |
| Cow position: | chr27:12596882-12596539 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 152, 126 |
| Conread position: | 648-1008 |
| Cow position: | chr27:11480512-11480886 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 649-818 |
| Cow position: | chr27:16871797-16871970 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 649-828 |
| Cow position: | chr27:28061648-28061825 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 125, 89 |
| Conread position: | 649-872 |
| Cow position: | chr27:22569888-22569673 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 204, 88 |
| Conread position: | 649-875 |
| Cow position: | chr27:4812764-4812997 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 649-902 |
| Cow position: | chr27:4835495-4835747 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 649-920 |
| Cow position: | chr27:25411401-25411668 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 69, 181 |
| Conread position: | 649-930 |
| Cow position: | chr27:20641225-20641504 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 115, 71 |
| Conread position: | 649-931 |
| Cow position: | chr27:4673135-4672845 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 258 |
| Conread position: | 649-974 |
| Cow position: | chr27:1768511-1768833 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 117, 44 |
| Conread position: | 649-984 |
| Cow position: | chr27:20067862-20068196 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 118, 70 |
| Conread position: | 649-989 |
| Cow position: | chr27:435354-435006 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 649-993 |
| Cow position: | chr27:299271-299604 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 107, 62 |
| Conread position: | 649-993 |
| Cow position: | chr27:8353589-8353265 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 150, 72 |
| Conread position: | 649-993 |
| Cow position: | chr27:10307181-10307533 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 73 |
| Conread position: | 649-993 |
| Cow position: | chr27:13875847-13875503 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 115, 192 |
| Conread position: | 649-993 |
| Cow position: | chr27:19500118-19500466 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 649-993 |
| Cow position: | chr27:22171416-22171072 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 270 |
| Conread position: | 649-993 |
| Cow position: | chr27:26424472-26424806 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 122, 34 |
| Conread position: | 649-993 |
| Cow position: | chr27:29493794-29494128 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 90 |
| Conread position: | 649-1003 |
| Cow position: | chr27:19685596-19685950 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 15 |
| Conread position: | 649-1003 |
| Cow position: | chr27:24477529-24477175 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 151, 100 |
| Conread position: | 649-1005 |
| Cow position: | chr27:27632497-27632835 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 152, 14 |
| Conread position: | 649-1007 |
| Cow position: | chr27:19718038-19717653 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 125, 95 |
| Conread position: | 650-989 |
| Cow position: | chr27:19661055-19660702 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 650-993 |
| Cow position: | chr27:20078982-20078635 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 197 |
| Conread position: | 651-890 |
| Cow position: | chr27:16626010-16625771 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 113, 5 |
| Conread position: | 651-1003 |
| Cow position: | chr27:31230979-31231320 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 172, 69 |
| Conread position: | 651-1004 |
| Cow position: | chr27:30915120-30914766 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 147, 45 |
| Conread position: | 651-1008 |
| Cow position: | chr27:22454663-22455038 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 652-993 |
| Cow position: | chr27:27245240-27245592 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 111, 342 |
| Conread position: | 652-1005 |
| Cow position: | chr27:23891052-23890690 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 653-921 |
| Cow position: | chr27:26413141-26413414 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 653-1001 |
| Cow position: | chr27:6550569-6550222 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 250, 120 |
| Conread position: | 654-918 |
| Cow position: | chr27:31148871-31148605 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 654-993 |
| Cow position: | chr27:11151787-11151441 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 239 |
| Conread position: | 659-993 |
| Cow position: | chr27:22386976-22386658 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 146, 109 |
| Conread position: | 662-993 |
| Cow position: | chr27:23594419-23594089 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 122, 49 |
| Conread position: | 664-969 |
| Cow position: | chr27:20481276-20481562 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 669-992 |
| Cow position: | chr27:30406941-30407276 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 117, 95 |
| Conread position: | 670-913 |
| Cow position: | chr27:20092743-20092986 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 48 |
| Conread position: | 670-939 |
| Cow position: | chr27:23483320-23483047 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 672-974 |
| Cow position: | chr27:31219346-31219057 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 7, 97 |
| Conread position: | 673-1003 |
| Cow position: | chr27:23511082-23510734 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 91, 268 |
| Conread position: | 677-993 |
| Cow position: | chr27:16780956-16780630 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 86, 199 |
| Conread position: | 683-997 |
| Cow position: | chr27:15378396-15378715 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 114, 61 |
| Conread position: | 689-993 |
| Cow position: | chr27:4944442-4944736 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 56 |
| Conread position: | 696-921 |
| Cow position: | chr27:22225526-22225752 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 697-1003 |
| Cow position: | chr27:590699-591009 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 699-903 |
| Cow position: | chr27:26407099-26407301 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 101, 69 |
| Conread position: | 699-993 |
| Cow position: | chr27:23452525-23452233 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 71, 85 |
| Conread position: | 701-993 |
| Cow position: | chr27:22489342-22489042 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 216 |
| Conread position: | 703-890 |
| Cow position: | chr27:8405763-8405951 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 152, 65 |
| Conread position: | 703-993 |
| Cow position: | chr27:23559969-23560259 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 705-862 |
| Cow position: | chr27:24306888-24306728 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 82 |
| Conread position: | 715-993 |
| Cow position: | chr27:23485264-23484986 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 10, 193 |
| Conread position: | 717-992 |
| Cow position: | chr27:23107853-23108131 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 743-992 |
| Cow position: | chr27:20897001-20897249 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 746-993 |
| Cow position: | chr27:12425308-12425058 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 746-1001 |
| Cow position: | chr27:12459304-12459050 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 750-992 |
| Cow position: | chr27:19509030-19508783 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 179 |
| Conread position: | 754-1008 |
| Cow position: | chr27:31210559-31210305 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 10, 143 |
| Conread position: | 766-993 |
| Cow position: | chr27:23994421-23994645 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 54 |
| Conread position: | 768-989 |
| Cow position: | chr27:27055285-27055070 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 7, 150 |
| Conread position: | 775-993 |
| Cow position: | chr27:15002988-15003209 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 25, 151 |
| Conread position: | 781-1007 |
| Cow position: | chr27:7343444-7343674 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 123 |
| Conread position: | 803-1001 |
| Cow position: | chr27:6106661-6106469 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 804-1003 |
| Cow position: | chr27:19576363-19576564 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 119 |
| Conread position: | 810-985 |
| Cow position: | chr27:15859343-15859519 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 104 |
| Conread position: | 810-1008 |
| Cow position: | chr27:11134040-11133838 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 106 |
| Conread position: | 813-992 |
| Cow position: | chr27:26504253-26504075 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 841-993 |
| Cow position: | chr27:178783-178633 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.