Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025C15.5 |
| Conread position: | 629-989 |
| Cow position: | chr28:33163638-33163289 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 135, 213 |
| Conread position: | 630-931 |
| Cow position: | chr28:33051855-33052168 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 134, 284 |
| Conread position: | 642-993 |
| Cow position: | chr28:4070808-4071149 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 124 |
| Conread position: | 646-950 |
| Cow position: | chr28:25728038-25728342 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 647-969 |
| Cow position: | chr28:11687185-11686851 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 117, 191 |
| Conread position: | 647-993 |
| Cow position: | chr28:11426698-11426357 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 139 |
| Conread position: | 647-993 |
| Cow position: | chr28:13474145-13474490 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 648-776 |
| Cow position: | chr28:23775894-23776019 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 648-801 |
| Cow position: | chr28:8348804-8348657 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 648-811 |
| Cow position: | chr28:2905425-2905582 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 70 |
| Conread position: | 648-822 |
| Cow position: | chr28:3751162-3751333 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 112, 69 |
| Conread position: | 648-822 |
| Cow position: | chr28:7980570-7980398 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 116, 90 |
| Conread position: | 648-845 |
| Cow position: | chr28:5904580-5904774 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 19 |
| Conread position: | 648-860 |
| Cow position: | chr28:3256642-3256858 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 116, 142 |
| Conread position: | 648-861 |
| Cow position: | chr28:2737963-2737745 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 71 |
| Conread position: | 648-865 |
| Cow position: | chr28:25563925-25564145 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 648-888 |
| Cow position: | chr28:13267630-13267877 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 48, 137 |
| Conread position: | 648-894 |
| Cow position: | chr28:8408579-8408828 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 104, 96 |
| Conread position: | 648-894 |
| Cow position: | chr28:25806416-25806667 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 135 |
| Conread position: | 648-897 |
| Cow position: | chr28:3169347-3169092 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 149, 35 |
| Conread position: | 648-909 |
| Cow position: | chr28:2862710-2862977 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 648-920 |
| Cow position: | chr28:5128881-5128607 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 70 |
| Conread position: | 648-920 |
| Cow position: | chr28:7865169-7865449 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 116, 182 |
| Conread position: | 648-924 |
| Cow position: | chr28:21598409-21598130 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 19 |
| Conread position: | 648-930 |
| Cow position: | chr28:10172565-10172286 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 152, 59 |
| Conread position: | 648-931 |
| Cow position: | chr28:18591118-18591401 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 126, 91 |
| Conread position: | 648-932 |
| Cow position: | chr28:11752296-11752008 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 116, 81 |
| Conread position: | 648-935 |
| Cow position: | chr28:25249199-25249486 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 110, 58 |
| Conread position: | 648-938 |
| Cow position: | chr28:5771214-5771501 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 15 |
| Conread position: | 648-938 |
| Cow position: | chr28:19222297-19222013 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 45 |
| Conread position: | 648-939 |
| Cow position: | chr28:6971499-6971210 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 116, 71 |
| Conread position: | 648-945 |
| Cow position: | chr28:2132074-2131780 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 116, 29 |
| Conread position: | 648-947 |
| Cow position: | chr28:19026165-19025855 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 648-961 |
| Cow position: | chr28:23793458-23793152 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 50 |
| Conread position: | 648-973 |
| Cow position: | chr28:11884675-11884357 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 116, 139 |
| Conread position: | 648-974 |
| Cow position: | chr28:4809642-4809947 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 63 |
| Conread position: | 648-985 |
| Cow position: | chr28:11585360-11585026 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 113, 284 |
| Conread position: | 648-987 |
| Cow position: | chr28:20409237-20409576 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 115, 96 |
| Conread position: | 648-989 |
| Cow position: | chr28:4016383-4016710 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 116, 70 |
| Conread position: | 648-989 |
| Cow position: | chr28:5144677-5144327 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 648-989 |
| Cow position: | chr28:5236754-5236408 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 54, 74 |
| Conread position: | 648-989 |
| Cow position: | chr28:5684558-5684887 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 19 |
| Conread position: | 648-989 |
| Cow position: | chr28:16346682-16346351 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 117, 52 |
| Conread position: | 648-992 |
| Cow position: | chr28:4884418-4884063 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 82 |
| Conread position: | 648-992 |
| Cow position: | chr28:15263876-15263528 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 186 |
| Conread position: | 648-993 |
| Cow position: | chr28:3144047-3143694 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 261 |
| Conread position: | 648-993 |
| Cow position: | chr28:3914554-3914896 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 26, 278 |
| Conread position: | 648-993 |
| Cow position: | chr28:4643918-4643579 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 203, 53 |
| Conread position: | 648-993 |
| Cow position: | chr28:4834997-4834652 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 95 |
| Conread position: | 648-993 |
| Cow position: | chr28:5437243-5436895 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 69, 92 |
| Conread position: | 648-993 |
| Cow position: | chr28:6091208-6091547 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 146, 70 |
| Conread position: | 648-993 |
| Cow position: | chr28:8347575-8347925 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 648-993 |
| Cow position: | chr28:8787389-8787730 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 19 |
| Conread position: | 648-993 |
| Cow position: | chr28:9285529-9285186 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 198 |
| Conread position: | 648-993 |
| Cow position: | chr28:9636608-9636266 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 64, 98 |
| Conread position: | 648-993 |
| Cow position: | chr28:10053491-10053141 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 281 |
| Conread position: | 648-993 |
| Cow position: | chr28:10745054-10745406 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 141 |
| Conread position: | 648-993 |
| Cow position: | chr28:11829093-11828768 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 70 |
| Conread position: | 648-993 |
| Cow position: | chr28:16919313-16918983 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 116, 27 |
| Conread position: | 648-993 |
| Cow position: | chr28:21363591-21363931 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 648-993 |
| Cow position: | chr28:21844804-21845142 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 70 |
| Conread position: | 648-993 |
| Cow position: | chr28:21868300-21868648 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 122 |
| Conread position: | 648-993 |
| Cow position: | chr28:22345864-22346213 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 95 |
| Conread position: | 648-993 |
| Cow position: | chr28:25056817-25057147 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 648-993 |
| Cow position: | chr28:26743466-26743822 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 648-993 |
| Cow position: | chr28:34430578-34430232 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 45, 127 |
| Conread position: | 648-994 |
| Cow position: | chr28:7512743-7512389 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 184 |
| Conread position: | 648-997 |
| Cow position: | chr28:3024067-3023721 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 136, 74 |
| Conread position: | 648-997 |
| Cow position: | chr28:11422966-11422624 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 116, 46 |
| Conread position: | 648-999 |
| Cow position: | chr28:16211247-16210905 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 70 |
| Conread position: | 648-1001 |
| Cow position: | chr28:22371832-22371471 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 648-1001 |
| Cow position: | chr28:30327246-30326902 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 115, 267 |
| Conread position: | 648-1002 |
| Cow position: | chr28:27218169-27218525 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 150, 125 |
| Conread position: | 648-1003 |
| Cow position: | chr28:4090200-4089858 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 152, 15 |
| Conread position: | 648-1003 |
| Cow position: | chr28:29416868-29416523 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 132, 74 |
| Conread position: | 648-1003 |
| Cow position: | chr28:30937818-30937477 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 132, 93 |
| Conread position: | 648-1004 |
| Cow position: | chr28:11866821-11866466 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 648-1004 |
| Cow position: | chr28:14997910-14998266 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 648-1004 |
| Cow position: | chr28:26982898-26982534 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 138 |
| Conread position: | 648-1005 |
| Cow position: | chr28:3746050-3746402 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 183, 97 |
| Conread position: | 648-1005 |
| Cow position: | chr28:7268091-7267746 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 114, 86 |
| Conread position: | 648-1005 |
| Cow position: | chr28:31841491-31841141 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 649-854 |
| Cow position: | chr28:7751451-7751250 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 649-866 |
| Cow position: | chr28:4587945-4588163 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 114, 95 |
| Conread position: | 649-890 |
| Cow position: | chr28:15044015-15043772 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 115, 39 |
| Conread position: | 649-890 |
| Cow position: | chr28:23675986-23676228 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 151, 95 |
| Conread position: | 649-923 |
| Cow position: | chr28:14649194-14649466 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 115, 175 |
| Conread position: | 649-930 |
| Cow position: | chr28:23410480-23410192 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 649-939 |
| Cow position: | chr28:12964416-12964705 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 649-939 |
| Cow position: | chr28:31110160-31109865 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 165 |
| Conread position: | 649-947 |
| Cow position: | chr28:12619412-12619723 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 72, 240 |
| Conread position: | 649-947 |
| Cow position: | chr28:25596478-25596776 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 649-974 |
| Cow position: | chr28:34133707-34134030 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 70 |
| Conread position: | 649-985 |
| Cow position: | chr28:11527413-11527076 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 115, 95 |
| Conread position: | 649-989 |
| Cow position: | chr28:33884251-33884589 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 649-992 |
| Cow position: | chr28:24082116-24082460 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 649-993 |
| Cow position: | chr28:3492939-3492596 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 178 |
| Conread position: | 649-993 |
| Cow position: | chr28:4158804-4159155 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 114, 89 |
| Conread position: | 649-993 |
| Cow position: | chr28:4282642-4282298 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 649-993 |
| Cow position: | chr28:10606785-10606447 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 138 |
| Conread position: | 649-993 |
| Cow position: | chr28:20124629-20124972 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 115, 126 |
| Conread position: | 649-1002 |
| Cow position: | chr28:657603-657265 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 140, 87 |
| Conread position: | 650-776 |
| Cow position: | chr28:9108293-9108420 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 650-821 |
| Cow position: | chr28:7608133-7607958 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 114, 137 |
| Conread position: | 650-869 |
| Cow position: | chr28:7549212-7548989 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 650-1003 |
| Cow position: | chr28:12430454-12430807 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 109 |
| Conread position: | 651-872 |
| Cow position: | chr28:34561198-34561415 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 95, 68 |
| Conread position: | 651-910 |
| Cow position: | chr28:26614732-26614983 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 204, 117 |
| Conread position: | 651-921 |
| Cow position: | chr28:23007886-23007609 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 651-931 |
| Cow position: | chr28:26220102-26220388 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 67 |
| Conread position: | 651-993 |
| Cow position: | chr28:16370228-16369898 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 149, 91 |
| Conread position: | 651-993 |
| Cow position: | chr28:23616255-23616596 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 139 |
| Conread position: | 653-917 |
| Cow position: | chr28:26719200-26719460 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 196, 119 |
| Conread position: | 656-900 |
| Cow position: | chr28:8022256-8022003 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 108, 47 |
| Conread position: | 658-974 |
| Cow position: | chr28:10863927-10863623 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 106, 58 |
| Conread position: | 660-875 |
| Cow position: | chr28:4536313-4536534 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 140, 104 |
| Conread position: | 664-1004 |
| Cow position: | chr28:4308048-4307691 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 243 |
| Conread position: | 667-993 |
| Cow position: | chr28:19262725-19262393 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 96 |
| Conread position: | 667-1001 |
| Cow position: | chr28:7009111-7008782 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 189, 44 |
| Conread position: | 669-821 |
| Cow position: | chr28:10762525-10762679 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 669-937 |
| Cow position: | chr28:28163951-28164223 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 10, 161 |
| Conread position: | 669-986 |
| Cow position: | chr28:22332401-22332714 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 74 |
| Conread position: | 673-992 |
| Cow position: | chr28:8140352-8140674 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 127, 101 |
| Conread position: | 677-993 |
| Cow position: | chr28:22813139-22813439 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 44 |
| Conread position: | 683-974 |
| Cow position: | chr28:5204072-5204362 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 81, 238 |
| Conread position: | 683-993 |
| Cow position: | chr28:11079186-11079491 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 81, 141 |
| Conread position: | 688-993 |
| Cow position: | chr28:25128768-25129075 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 76, 223 |
| Conread position: | 690-993 |
| Cow position: | chr28:5577412-5577723 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 691-1004 |
| Cow position: | chr28:3011385-3011065 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 96 |
| Conread position: | 692-921 |
| Cow position: | chr28:16246174-16245944 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 692-993 |
| Cow position: | chr28:10589136-10588842 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 696-997 |
| Cow position: | chr28:19564335-19564040 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 701-993 |
| Cow position: | chr28:4181900-4182192 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 701-993 |
| Cow position: | chr28:5199720-5200018 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 94 |
| Conread position: | 702-993 |
| Cow position: | chr28:17071232-17071531 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 181 |
| Conread position: | 705-993 |
| Cow position: | chr28:11197771-11197481 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 126 |
| Conread position: | 719-993 |
| Cow position: | chr28:4045767-4046035 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 40 |
| Conread position: | 721-974 |
| Cow position: | chr28:7350575-7350825 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 43, 73 |
| Conread position: | 724-993 |
| Cow position: | chr28:5139076-5138808 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 40, 174 |
| Conread position: | 734-993 |
| Cow position: | chr28:7619222-7618969 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 736-992 |
| Cow position: | chr28:3445549-3445290 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 28, 5 |
| Conread position: | 736-993 |
| Cow position: | chr28:3411059-3410798 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 149 |
| Conread position: | 737-1007 |
| Cow position: | chr28:17739756-17740032 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 739-993 |
| Cow position: | chr28:4013022-4013274 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 741-991 |
| Cow position: | chr28:7132138-7131902 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 120, 27 |
| Conread position: | 742-993 |
| Cow position: | chr28:26531343-26531090 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 751-993 |
| Cow position: | chr28:777619-777867 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 178 |
| Conread position: | 763-1003 |
| Cow position: | chr28:2279630-2279399 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 772-993 |
| Cow position: | chr28:5254843-5255062 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 772-1001 |
| Cow position: | chr28:6975209-6975433 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 152 |
| Conread position: | 774-993 |
| Cow position: | chr28:9705623-9705847 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 799-989 |
| Cow position: | chr28:16879569-16879755 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 127 |
| Conread position: | 799-992 |
| Cow position: | chr28:30902122-30902311 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 803-998 |
| Cow position: | chr28:7557734-7557534 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 818-993 |
| Cow position: | chr28:8936164-8936339 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 67 |
| Conread position: | 841-1007 |
| Cow position: | chr28:4077305-4077129 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.