Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 221-428
Cow position:
Alignm length: 208
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 157, 0

Conread position: 221-464
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 128, 47

Conread position: 223-429
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 32

Conread position: 449-672
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 13

Conread position: 461-852
Cow position:
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 377

Conread position: 468-836
Cow position:
Alignm length: 373
Alignm identity: 203
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 109, 123

Conread position: 469-852
Cow position:
Alignm length: 385
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 96

Conread position: 474-785
Cow position:
Alignm length: 317
Alignm identity: 215
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 143, 106

Conread position: 475-675
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 107, 101

Conread position: 475-794
Cow position:
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 40

Conread position: 475-851
Cow position:
Alignm length: 380
Alignm identity: 256
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 254, 105

Conread position: 475-852
Cow position:
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 96

Conread position: 476-662
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 476-678
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 164, 47

Conread position: 476-800
Cow position:
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 476-834
Cow position:
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 476-834
Cow position:
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 0

Conread position: 476-849
Cow position:
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-849
Cow position:
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 0

Conread position: 476-852
Cow position:
Alignm length: 396
Alignm identity: 271
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 83, 196

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 476-852
Cow position:
Alignm length: 381
Alignm identity: 244
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 65

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 212

Conread position: 476-852
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 21

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 0

Conread position: 477-727
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 101, 182

Conread position: 477-736
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 195, 0

Conread position: 477-745
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 91

Conread position: 477-748
Cow position:
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 196

Conread position: 477-761
Cow position:
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 218, 0

Conread position: 477-809
Cow position:
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 50

Conread position: 477-818
Cow position:
Alignm length: 343
Alignm identity: 234
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 86, 94

Conread position: 477-822
Cow position:
Alignm length: 355
Alignm identity: 226
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 17

Conread position: 477-833
Cow position:
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 126

Conread position: 477-836
Cow position:
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 477-849
Cow position:
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 217

Conread position: 477-849
Cow position:
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 477-851
Cow position:
Alignm length: 376
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 68

Conread position: 477-851
Cow position:
Alignm length: 382
Alignm identity: 256
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 115

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 84

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 477-852
Cow position:
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 46

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-852
Cow position:
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 191

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 352

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 215

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 477-860
Cow position:
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 97

Conread position: 477-860
Cow position:
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 102

Conread position: 477-872
Cow position:
Alignm length: 402
Alignm identity: 269
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 102

Conread position: 478-704
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 478-847
Cow position:
Alignm length: 375
Alignm identity: 249
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 102

Conread position: 478-850
Cow position:
Alignm length: 374
Alignm identity: 251
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 87, 94

Conread position: 478-852
Cow position:
Alignm length: 375
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 478-852
Cow position:
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 478-852
Cow position:
Alignm length: 375
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 478-861
Cow position:
Alignm length: 390
Alignm identity: 255
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 80

Conread position: 480-850
Cow position:
Alignm length: 372
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 171

Conread position: 487-851
Cow position:
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 231

Conread position: 487-852
Cow position:
Alignm length: 370
Alignm identity: 258
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 194, 74

Conread position: 490-852
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 104

Conread position: 491-852
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 0

Conread position: 492-849
Cow position:
Alignm length: 359
Alignm identity: 229
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 79

Conread position: 497-830
Cow position:
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 64

Conread position: 497-848
Cow position:
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 340

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 64

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 63

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 195

Conread position: 497-852
Cow position:
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 497-852
Cow position:
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 64

Conread position: 500-689
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 21

Conread position: 511-828
Cow position:
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 513-852
Cow position:
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 0

Conread position: 528-852
Cow position:
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 0

Conread position: 538-852
Cow position:
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 544-852
Cow position:
Alignm length: 313
Alignm identity: 203
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 39

Conread position: 570-851
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 29

Conread position: 581-838
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 39

Conread position: 589-848
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 594-849
Cow position:
Alignm length: 256
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 148, 0

Conread position: 594-852
Cow position:
Alignm length: 259
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 91, 0

Conread position: 615-852
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 96, 0

Conread position: 624-851
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 67

Conread position: 641-849
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 667-848
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 684-852
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 712-852
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Show alignments to all cow chromosomes.