Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 223-429
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 225-430
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 466-852
Cow position:
Alignm length: 391
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 169

Conread position: 467-852
Cow position:
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 26

Conread position: 469-851
Cow position:
Alignm length: 384
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 304

Conread position: 469-852
Cow position:
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 297

Conread position: 475-771
Cow position:
Alignm length: 301
Alignm identity: 201
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 64

Conread position: 475-849
Cow position:
Alignm length: 381
Alignm identity: 254
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 64

Conread position: 475-850
Cow position:
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 57

Conread position: 475-852
Cow position:
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 298

Conread position: 475-852
Cow position:
Alignm length: 385
Alignm identity: 262
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 10, 147

Conread position: 476-805
Cow position:
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 476-833
Cow position:
Alignm length: 359
Alignm identity: 246
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 223, 52

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 476-848
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 186

Conread position: 476-849
Cow position:
Alignm length: 374
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-849
Cow position:
Alignm length: 381
Alignm identity: 264
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 62, 190

Conread position: 476-851
Cow position:
Alignm length: 380
Alignm identity: 254
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 12, 56

Conread position: 476-851
Cow position:
Alignm length: 381
Alignm identity: 249
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 205

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 362

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 476-852
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 41

Conread position: 477-649
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 477-673
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 477-676
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 39

Conread position: 477-702
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 477-709
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 87, 94

Conread position: 477-718
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 477-820
Cow position:
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 59

Conread position: 477-827
Cow position:
Alignm length: 352
Alignm identity: 227
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 347, 49

Conread position: 477-833
Cow position:
Alignm length: 363
Alignm identity: 228
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 220

Conread position: 477-833
Cow position:
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 89

Conread position: 477-833
Cow position:
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 83

Conread position: 477-844
Cow position:
Alignm length: 377
Alignm identity: 242
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 43

Conread position: 477-848
Cow position:
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 0

Conread position: 477-849
Cow position:
Alignm length: 373
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 477-849
Cow position:
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 477-849
Cow position:
Alignm length: 375
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 205

Conread position: 477-851
Cow position:
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 264

Conread position: 477-851
Cow position:
Alignm length: 379
Alignm identity: 245
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 153, 94

Conread position: 477-851
Cow position:
Alignm length: 378
Alignm identity: 242
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 86, 106

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 84

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 84

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 215

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 94

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 477-874
Cow position:
Alignm length: 404
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 202

Conread position: 478-851
Cow position:
Alignm length: 376
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 210

Conread position: 478-873
Cow position:
Alignm length: 399
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 198

Conread position: 480-852
Cow position:
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 488-851
Cow position:
Alignm length: 366
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 46

Conread position: 488-852
Cow position:
Alignm length: 383
Alignm identity: 261
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 264, 121

Conread position: 489-727
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 494-749
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 77

Conread position: 497-670
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 195

Conread position: 497-852
Cow position:
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 194

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 46

Conread position: 498-678
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 498-849
Cow position:
Alignm length: 356
Alignm identity: 231
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 56

Conread position: 498-852
Cow position:
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 74

Conread position: 501-852
Cow position:
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 513-852
Cow position:
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 0

Conread position: 528-843
Cow position:
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 528-870
Cow position:
Alignm length: 345
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 44

Conread position: 532-848
Cow position:
Alignm length: 327
Alignm identity: 230
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 168, 50

Conread position: 553-852
Cow position:
Alignm length: 300
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 571-852
Cow position:
Alignm length: 286
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 253

Conread position: 581-851
Cow position:
Alignm length: 272
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 99, 51

Conread position: 641-852
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 106, 0

Conread position: 657-852
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 178, 0

Conread position: 659-852
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 33

Conread position: 667-852
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 170, 0

Conread position: 667-852
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 122, 90

Conread position: 668-851
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 668-852
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 671-852
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 103

Show alignments to all cow chromosomes.