Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 214-430
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 197, 77

Conread position: 221-436
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 10, 23

Conread position: 221-456
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 173, 156

Conread position: 221-481
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 45

Conread position: 221-489
Cow position:
Alignm length: 271
Alignm identity: 172
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 211, 55

Conread position: 224-428
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 41

Conread position: 464-852
Cow position:
Alignm length: 410
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 124

Conread position: 466-833
Cow position:
Alignm length: 369
Alignm identity: 237
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 283, 78

Conread position: 466-842
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 466-852
Cow position:
Alignm length: 390
Alignm identity: 265
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 11, 136

Conread position: 474-849
Cow position:
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 98

Conread position: 474-852
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 12

Conread position: 475-813
Cow position:
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 57

Conread position: 475-848
Cow position:
Alignm length: 379
Alignm identity: 245
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 99

Conread position: 475-851
Cow position:
Alignm length: 381
Alignm identity: 241
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 81

Conread position: 475-851
Cow position:
Alignm length: 380
Alignm identity: 245
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 79

Conread position: 475-852
Cow position:
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 0

Conread position: 476-625
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 476-688
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 476-711
Cow position:
Alignm length: 237
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 93

Conread position: 476-727
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 117, 103

Conread position: 476-835
Cow position:
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 476-838
Cow position:
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 121

Conread position: 476-843
Cow position:
Alignm length: 375
Alignm identity: 250
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 193, 50

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 0

Conread position: 476-848
Cow position:
Alignm length: 375
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 174

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 476-849
Cow position:
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 0

Conread position: 476-849
Cow position:
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 0

Conread position: 476-851
Cow position:
Alignm length: 383
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 13

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 53

Conread position: 476-852
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 144

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 76

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 476-852
Cow position:
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 365

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 476-852
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 113

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 200

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 150

Conread position: 476-852
Cow position:
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 198

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 20

Conread position: 476-853
Cow position:
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 297

Conread position: 476-859
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-863
Cow position:
Alignm length: 390
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 278, 39

Conread position: 477-662
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 477-672
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 477-702
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 188, 96

Conread position: 477-704
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 21

Conread position: 477-720
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 477-727
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 114, 67

Conread position: 477-730
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 477-749
Cow position:
Alignm length: 275
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 95

Conread position: 477-749
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 477-785
Cow position:
Alignm length: 309
Alignm identity: 215
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 477-842
Cow position:
Alignm length: 367
Alignm identity: 230
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 18

Conread position: 477-843
Cow position:
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 87

Conread position: 477-848
Cow position:
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 67

Conread position: 477-849
Cow position:
Alignm length: 373
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 477-850
Cow position:
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 118

Conread position: 477-851
Cow position:
Alignm length: 376
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 45

Conread position: 477-851
Cow position:
Alignm length: 381
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 290

Conread position: 477-851
Cow position:
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 87

Conread position: 477-851
Cow position:
Alignm length: 378
Alignm identity: 256
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 156, 43

Conread position: 477-851
Cow position:
Alignm length: 377
Alignm identity: 252
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 125, 63

Conread position: 477-851
Cow position:
Alignm length: 375
Alignm identity: 254
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 477-851
Cow position:
Alignm length: 375
Alignm identity: 251
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 95, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 199

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 94

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 249
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 112, 124

Conread position: 477-852
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 121

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 78

Conread position: 477-852
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 215

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 115

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 106

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 9

Conread position: 477-852
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 361

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-852
Cow position:
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 42

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 0

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 199

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 102

Conread position: 477-852
Cow position:
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 362

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 94

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 216

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 105

Conread position: 477-856
Cow position:
Alignm length: 381
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 232

Conread position: 477-876
Cow position:
Alignm length: 404
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 128

Conread position: 478-852
Cow position:
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 94

Conread position: 478-852
Cow position:
Alignm length: 378
Alignm identity: 253
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 84, 66

Conread position: 478-852
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 96

Conread position: 479-852
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 245

Conread position: 479-852
Cow position:
Alignm length: 377
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 93

Conread position: 480-849
Cow position:
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 199

Conread position: 481-836
Cow position:
Alignm length: 367
Alignm identity: 246
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 11

Conread position: 484-849
Cow position:
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 105

Conread position: 487-852
Cow position:
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 120

Conread position: 487-852
Cow position:
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 202

Conread position: 488-852
Cow position:
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 494-849
Cow position:
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 68

Conread position: 497-833
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 497-834
Cow position:
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 54

Conread position: 497-835
Cow position:
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 64

Conread position: 497-841
Cow position:
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 64

Conread position: 497-852
Cow position:
Alignm length: 365
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 348

Conread position: 497-852
Cow position:
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 497-852
Cow position:
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 497-852
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 202

Conread position: 498-852
Cow position:
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 150

Conread position: 498-852
Cow position:
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 506-771
Cow position:
Alignm length: 270
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 94

Conread position: 508-862
Cow position:
Alignm length: 357
Alignm identity: 238
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 78, 92

Conread position: 513-848
Cow position:
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 513-852
Cow position:
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 513-852
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 518-852
Cow position:
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 115

Conread position: 526-852
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 226

Conread position: 527-832
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 550-849
Cow position:
Alignm length: 301
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 22

Conread position: 554-848
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 0

Conread position: 571-851
Cow position:
Alignm length: 282
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 9

Conread position: 573-828
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 252, 20

Conread position: 577-852
Cow position:
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 587-829
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 593-834
Cow position:
Alignm length: 243
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 30

Conread position: 594-851
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 123, 81

Conread position: 611-852
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 226, 0

Conread position: 621-852
Cow position:
Alignm length: 248
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 96, 234

Conread position: 643-852
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 192, 0

Conread position: 657-852
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 178, 0

Conread position: 676-852
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 16

Conread position: 684-832
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 684-851
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 90

Show alignments to all cow chromosomes.