Cow genome map
Conread name: | Ss1.1-Pig4-TMW8025D03.5 |
Conread position: | 211-430 |
Cow position: | chr16:15368683-15368902 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 152 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 201, 54 |
Conread position: | 221-428 |
Cow position: | chr16:16687172-16687378 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 146 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 65, 158 |
Conread position: | 221-471 |
Cow position: | chr16:29031336-29031575 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 170 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 210, 74 |
Conread position: | 231-428 |
Cow position: | chr16:32934402-32934597 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 135 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 146, 0 |
Conread position: | 449-845 |
Cow position: | chr16:49236242-49235851 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 77 |
Conread position: | 462-852 |
Cow position: | chr16:49257688-49257313 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 177 |
Conread position: | 466-852 |
Cow position: | chr16:11052059-11052432 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 118 |
Conread position: | 467-852 |
Cow position: | chr16:2239842-2239464 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 469-860 |
Cow position: | chr16:36282285-36282678 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 55 |
Conread position: | 474-690 |
Cow position: | chr16:15369337-15369544 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 159 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 474-841 |
Cow position: | chr16:26662648-26663009 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 81 |
Conread position: | 475-842 |
Cow position: | chr16:42740521-42740157 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 126 |
Conread position: | 475-849 |
Cow position: | chr16:25084520-25084889 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 49 |
Conread position: | 475-852 |
Cow position: | chr16:5660762-5661131 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 87 |
Conread position: | 476-648 |
Cow position: | chr16:14666891-14666719 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 130 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 476-769 |
Cow position: | chr16:9777028-9777321 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 476-828 |
Cow position: | chr16:7676796-7676453 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 476-852 |
Cow position: | chr16:1568550-1568184 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 48 |
Conread position: | 476-852 |
Cow position: | chr16:2484240-2483869 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 476-852 |
Cow position: | chr16:2728416-2728030 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 312, 228 |
Conread position: | 476-852 |
Cow position: | chr16:8817208-8816834 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 229, 0 |
Conread position: | 476-852 |
Cow position: | chr16:10204518-10204146 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 276 |
Conread position: | 476-852 |
Cow position: | chr16:10437154-10437513 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 476-852 |
Cow position: | chr16:15183703-15184074 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 476-852 |
Cow position: | chr16:15491610-15491979 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 476-852 |
Cow position: | chr16:23253603-23253234 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 476-852 |
Cow position: | chr16:24881790-24881420 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 0 |
Conread position: | 476-852 |
Cow position: | chr16:25340868-25341239 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 476-852 |
Cow position: | chr16:25440511-25440888 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 195 |
Conread position: | 476-852 |
Cow position: | chr16:25458578-25458201 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 195 |
Conread position: | 476-852 |
Cow position: | chr16:28472199-28471824 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 0 |
Conread position: | 476-852 |
Cow position: | chr16:29045928-29046292 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 67 |
Conread position: | 476-852 |
Cow position: | chr16:31593009-31592634 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 246, 117 |
Conread position: | 476-852 |
Cow position: | chr16:40297278-40296904 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 0 |
Conread position: | 476-852 |
Cow position: | chr16:43898371-43897997 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 76 |
Conread position: | 477-691 |
Cow position: | chr16:21185179-21185393 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 87, 99 |
Conread position: | 477-744 |
Cow position: | chr16:14422614-14422881 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 181 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 96, 67 |
Conread position: | 477-771 |
Cow position: | chr16:32935052-32935327 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 209 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 477-782 |
Cow position: | chr16:19713950-19713646 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 210 |
Conread position: | 477-849 |
Cow position: | chr16:5918382-5918753 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 100 |
Conread position: | 477-849 |
Cow position: | chr16:47562594-47562954 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 253 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 84, 45 |
Conread position: | 477-850 |
Cow position: | chr16:44964950-44965321 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 262 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 107, 75 |
Conread position: | 477-851 |
Cow position: | chr16:9929454-9929814 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 251 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 106, 41 |
Conread position: | 477-851 |
Cow position: | chr16:26518096-26517736 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 246 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 90, 52 |
Conread position: | 477-851 |
Cow position: | chr16:29982172-29982553 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 253 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 8, 89 |
Conread position: | 477-851 |
Cow position: | chr16:36232699-36232335 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 256 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 272, 75 |
Conread position: | 477-851 |
Cow position: | chr16:54647232-54647597 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 477-852 |
Cow position: | chr16:408134-407764 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 0 |
Conread position: | 477-852 |
Cow position: | chr16:1430125-1430494 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 0 |
Conread position: | 477-852 |
Cow position: | chr16:6942520-6942894 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 94 |
Conread position: | 477-852 |
Cow position: | chr16:12539027-12538653 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 360, 0 |
Conread position: | 477-852 |
Cow position: | chr16:18688220-18687852 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 53 |
Conread position: | 477-852 |
Cow position: | chr16:25157318-25156949 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 29 |
Conread position: | 477-852 |
Cow position: | chr16:32605725-32606099 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 94 |
Conread position: | 477-853 |
Cow position: | chr16:20255409-20255038 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 477-874 |
Cow position: | chr16:7905541-7905937 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 291, 179 |
Conread position: | 478-831 |
Cow position: | chr16:9457428-9457768 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 237 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 85, 7 |
Conread position: | 478-852 |
Cow position: | chr16:15565649-15566020 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 0 |
Conread position: | 480-852 |
Cow position: | chr16:6549620-6549252 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 480-852 |
Cow position: | chr16:29676404-29676038 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 481-645 |
Cow position: | chr16:39818526-39818692 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 482-640 |
Cow position: | chr16:5483419-5483263 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 116 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 482-852 |
Cow position: | chr16:27734902-27734533 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 0 |
Conread position: | 484-852 |
Cow position: | chr16:52815710-52815364 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 251 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 487-852 |
Cow position: | chr16:23982219-23982581 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 325, 0 |
Conread position: | 497-832 |
Cow position: | chr16:31677-32000 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 497-844 |
Cow position: | chr16:4303552-4303210 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 79 |
Conread position: | 497-852 |
Cow position: | chr16:28171442-28171089 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 103 |
Conread position: | 498-851 |
Cow position: | chr16:14669212-14669567 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 226 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 65, 153 |
Conread position: | 500-796 |
Cow position: | chr16:10376342-10376057 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 182 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 504-765 |
Cow position: | chr16:29031841-29032100 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 187 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 236, 0 |
Conread position: | 513-841 |
Cow position: | chr16:16687801-16688131 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 263 |
Conread position: | 517-849 |
Cow position: | chr16:40887323-40886990 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 238 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 135, 12 |
Conread position: | 520-849 |
Cow position: | chr16:25152726-25153043 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 235 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 60, 29 |
Conread position: | 520-851 |
Cow position: | chr16:5888421-5888753 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 119 |
Conread position: | 566-852 |
Cow position: | chr16:2411983-2411700 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 0 |
Conread position: | 578-852 |
Cow position: | chr16:16276509-16276236 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 199 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 10, 202 |
Conread position: | 582-852 |
Cow position: | chr16:10808166-10808427 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 200 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 17, 111 |
Conread position: | 595-848 |
Cow position: | chr16:11111918-11111672 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 166 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 611-852 |
Cow position: | chr16:25187673-25187913 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 180 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 224, 0 |
Conread position: | 613-849 |
Cow position: | chr16:836071-836297 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 170 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 615-852 |
Cow position: | chr16:36362312-36362090 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 174 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 621-852 |
Cow position: | chr16:56551170-56551397 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 0 |
Conread position: | 635-852 |
Cow position: | chr16:39820694-39820902 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 161 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 636-810 |
Cow position: | chr16:56320894-56321068 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 73, 68 |
Conread position: | 667-852 |
Cow position: | chr16:34529413-34529595 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 139 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 676-852 |
Cow position: | chr16:5483418-5483593 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 132 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 18, 22 |
Conread position: | 696-849 |
Cow position: | chr16:14666714-14666562 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 141, 0 |
Show alignments to all cow chromosomes.