Cow genome map
Conread name: | Ss1.1-Pig4-TMW8025D03.5 |
Conread position: | 221-420 |
Cow position: | chr19:39687209-39687406 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 146 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 33, 45 |
Conread position: | 459-852 |
Cow position: | chr19:4385154-4385541 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 463-749 |
Cow position: | chr19:32238184-32237899 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 209 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 18, 45 |
Conread position: | 466-851 |
Cow position: | chr19:359814-359445 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 253 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 467-849 |
Cow position: | chr19:15953553-15953911 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 253 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 467-852 |
Cow position: | chr19:32665208-32665590 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 247 |
Conread position: | 475-852 |
Cow position: | chr19:34106-34480 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 155 |
Conread position: | 475-852 |
Cow position: | chr19:32183761-32183395 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 245 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 13, 98 |
Conread position: | 476-625 |
Cow position: | chr19:544205-544056 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 108 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 476-641 |
Cow position: | chr19:801676-801841 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 121 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 88, 106 |
Conread position: | 476-669 |
Cow position: | chr19:33872929-33873117 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 144 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 476-803 |
Cow position: | chr19:685540-685855 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 228 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 476-852 |
Cow position: | chr19:171896-172271 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 0 |
Conread position: | 476-852 |
Cow position: | chr19:203648-204021 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 105 |
Conread position: | 476-852 |
Cow position: | chr19:439961-439583 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 362 |
Conread position: | 476-852 |
Cow position: | chr19:27211873-27212243 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 229 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 320, 123 |
Conread position: | 476-852 |
Cow position: | chr19:28581953-28581596 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 50 |
Conread position: | 476-852 |
Cow position: | chr19:33941297-33941672 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 0 |
Conread position: | 476-852 |
Cow position: | chr19:39390208-39390576 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 476-852 |
Cow position: | chr19:40887960-40887592 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 77 |
Conread position: | 476-852 |
Cow position: | chr19:55078431-55078806 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 0 |
Conread position: | 476-856 |
Cow position: | chr19:40852745-40852367 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 359, 0 |
Conread position: | 477-690 |
Cow position: | chr19:350888-350670 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 87, 68 |
Conread position: | 477-788 |
Cow position: | chr19:42649379-42649079 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 200 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 477-849 |
Cow position: | chr19:32212374-32212013 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 477-850 |
Cow position: | chr19:548082-548446 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 248 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 353, 128 |
Conread position: | 477-850 |
Cow position: | chr19:20125320-20125677 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 252 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 153, 40 |
Conread position: | 477-852 |
Cow position: | chr19:76546-76193 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 256 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 477-852 |
Cow position: | chr19:4252671-4252299 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 201 |
Conread position: | 477-852 |
Cow position: | chr19:4533057-4532692 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 140 |
Conread position: | 477-852 |
Cow position: | chr19:10672620-10672246 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 0 |
Conread position: | 477-852 |
Cow position: | chr19:29209253-29209621 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 0 |
Conread position: | 477-852 |
Cow position: | chr19:30371962-30372342 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 196 |
Conread position: | 477-852 |
Cow position: | chr19:31341410-31341766 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 477-852 |
Cow position: | chr19:32193270-32193637 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 73 |
Conread position: | 477-852 |
Cow position: | chr19:32244366-32244744 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 99 |
Conread position: | 477-852 |
Cow position: | chr19:35978954-35979324 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 96 |
Conread position: | 477-852 |
Cow position: | chr19:39688236-39688589 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 477-852 |
Cow position: | chr19:43143402-43143776 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 130 |
Conread position: | 477-874 |
Cow position: | chr19:416335-416735 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 48 |
Conread position: | 478-795 |
Cow position: | chr19:378198-377871 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 230 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 100, 156 |
Conread position: | 478-874 |
Cow position: | chr19:36036054-36036441 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 256 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 385, 121 |
Conread position: | 480-685 |
Cow position: | chr19:36477050-36477250 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 141 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 480-827 |
Cow position: | chr19:1031803-1032138 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 487-771 |
Cow position: | chr19:261136-261416 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 103 |
Conread position: | 487-852 |
Cow position: | chr19:7488009-7488373 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 350, 0 |
Conread position: | 489-639 |
Cow position: | chr19:25622719-25622569 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 110 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 75, 87 |
Conread position: | 495-838 |
Cow position: | chr19:28592984-28593324 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 66 |
Conread position: | 497-815 |
Cow position: | chr19:52152543-52152237 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 64 |
Conread position: | 497-852 |
Cow position: | chr19:37614-37956 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 497-852 |
Cow position: | chr19:772316-772659 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 97 |
Conread position: | 497-852 |
Cow position: | chr19:7341778-7342128 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 88 |
Conread position: | 497-855 |
Cow position: | chr19:171037-170679 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 503-851 |
Cow position: | chr19:20111512-20111169 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 228 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 61, 68 |
Conread position: | 520-849 |
Cow position: | chr19:32223698-32223381 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 229 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 23, 42 |
Conread position: | 523-804 |
Cow position: | chr19:35376286-35376572 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 208 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 6, 149 |
Conread position: | 545-848 |
Cow position: | chr19:893848-893556 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 555-876 |
Cow position: | chr19:561730-561422 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 225 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 573-852 |
Cow position: | chr19:39546413-39546688 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 19 |
Conread position: | 615-852 |
Cow position: | chr19:27052939-27052709 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 180 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 628-848 |
Cow position: | chr19:543790-543570 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 157 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 59, 102 |
Conread position: | 630-849 |
Cow position: | chr19:28376370-28376579 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 167 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 668-852 |
Cow position: | chr19:33873304-33873487 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 142 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 169, 0 |
Conread position: | 687-852 |
Cow position: | chr19:350387-350223 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 694-851 |
Cow position: | chr19:6553516-6553670 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 115 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 78, 0 |
Show alignments to all cow chromosomes.