Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 220-419
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 40

Conread position: 221-435
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 183, 0

Conread position: 221-464
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 46

Conread position: 224-421
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 153, 0

Conread position: 447-852
Cow position:
Alignm length: 409
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 20

Conread position: 461-852
Cow position:
Alignm length: 394
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 82

Conread position: 466-852
Cow position:
Alignm length: 389
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 109

Conread position: 466-852
Cow position:
Alignm length: 387
Alignm identity: 265
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 467-851
Cow position:
Alignm length: 389
Alignm identity: 255
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 15, 105

Conread position: 469-852
Cow position:
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 140

Conread position: 474-775
Cow position:
Alignm length: 306
Alignm identity: 216
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 77

Conread position: 474-849
Cow position:
Alignm length: 379
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 36

Conread position: 474-852
Cow position:
Alignm length: 383
Alignm identity: 238
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 75, 108

Conread position: 475-721
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 6, 128

Conread position: 475-848
Cow position:
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 475-852
Cow position:
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 0

Conread position: 475-861
Cow position:
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 476-649
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 91, 48

Conread position: 476-677
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 112, 0

Conread position: 476-805
Cow position:
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 476-807
Cow position:
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 476-843
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 103

Conread position: 476-849
Cow position:
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 306

Conread position: 476-849
Cow position:
Alignm length: 375
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 100

Conread position: 476-850
Cow position:
Alignm length: 379
Alignm identity: 253
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 118

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 22

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 191

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 476-852
Cow position:
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 90

Conread position: 476-852
Cow position:
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 231

Conread position: 476-852
Cow position:
Alignm length: 385
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 88

Conread position: 476-852
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 79

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 100

Conread position: 476-855
Cow position:
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 476-855
Cow position:
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 92

Conread position: 477-710
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 199, 12

Conread position: 477-799
Cow position:
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 94

Conread position: 477-800
Cow position:
Alignm length: 326
Alignm identity: 204
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 31

Conread position: 477-810
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 150

Conread position: 477-814
Cow position:
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 28

Conread position: 477-834
Cow position:
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 477-838
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 46

Conread position: 477-844
Cow position:
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 198

Conread position: 477-848
Cow position:
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 477-849
Cow position:
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 151

Conread position: 477-849
Cow position:
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 113

Conread position: 477-849
Cow position:
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 477-849
Cow position:
Alignm length: 375
Alignm identity: 252
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 21

Conread position: 477-849
Cow position:
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-850
Cow position:
Alignm length: 383
Alignm identity: 240
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 95

Conread position: 477-850
Cow position:
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 151

Conread position: 477-850
Cow position:
Alignm length: 375
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 302

Conread position: 477-851
Cow position:
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 114

Conread position: 477-851
Cow position:
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 20

Conread position: 477-851
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 212

Conread position: 477-851
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 48

Conread position: 477-851
Cow position:
Alignm length: 375
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 477-852
Cow position:
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 201

Conread position: 477-852
Cow position:
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 149

Conread position: 477-852
Cow position:
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 214, 66

Conread position: 477-852
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 9

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 94

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 39

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 144

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 477-852
Cow position:
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 84

Conread position: 477-855
Cow position:
Alignm length: 379
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 478-679
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 123

Conread position: 478-836
Cow position:
Alignm length: 360
Alignm identity: 225
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 63

Conread position: 478-852
Cow position:
Alignm length: 378
Alignm identity: 235
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 184, 91

Conread position: 479-850
Cow position:
Alignm length: 372
Alignm identity: 254
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 104, 0

Conread position: 480-852
Cow position:
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 480-852
Cow position:
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 481-850
Cow position:
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 202

Conread position: 484-649
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 95, 84

Conread position: 484-828
Cow position:
Alignm length: 346
Alignm identity: 233
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 286, 115

Conread position: 487-850
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 487-852
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 112

Conread position: 487-852
Cow position:
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 225

Conread position: 487-852
Cow position:
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 487-852
Cow position:
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 126

Conread position: 487-852
Cow position:
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 98

Conread position: 488-852
Cow position:
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 0

Conread position: 489-852
Cow position:
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 187

Conread position: 491-875
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 88, 143

Conread position: 494-852
Cow position:
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 495-852
Cow position:
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 497-770
Cow position:
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 497-810
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 497-815
Cow position:
Alignm length: 322
Alignm identity: 208
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 73

Conread position: 497-844
Cow position:
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 195

Conread position: 497-852
Cow position:
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 84

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 64

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 177

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 64

Conread position: 497-852
Cow position:
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 32

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 177

Conread position: 498-852
Cow position:
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 13

Conread position: 500-847
Cow position:
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 501-852
Cow position:
Alignm length: 356
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 342

Conread position: 501-852
Cow position:
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 503-858
Cow position:
Alignm length: 357
Alignm identity: 223
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 69

Conread position: 504-851
Cow position:
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 30

Conread position: 526-852
Cow position:
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 57

Conread position: 543-849
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 36, 242

Conread position: 546-852
Cow position:
Alignm length: 313
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 18, 26

Conread position: 571-850
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 183, 5

Conread position: 594-810
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 179, 87

Conread position: 599-851
Cow position:
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 94

Conread position: 603-852
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 232, 0

Conread position: 615-852
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 224, 0

Conread position: 621-851
Cow position:
Alignm length: 233
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 119, 67

Conread position: 622-852
Cow position:
Alignm length: 234
Alignm identity: 178
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 151, 44

Conread position: 626-851
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 112, 61

Conread position: 644-861
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 16

Conread position: 645-880
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 29

Conread position: 656-851
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 162, 0

Conread position: 656-852
Cow position:
Alignm length: 197
Alignm identity: 156
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 65, 0

Conread position: 667-848
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 667-849
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 170, 0

Conread position: 667-852
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 670-852
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 165, 0

Conread position: 701-852
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 134

Show alignments to all cow chromosomes.