Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 214-428
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 163, 0

Conread position: 221-391
Cow position:
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 221-428
Cow position:
Alignm length: 208
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 156, 0

Conread position: 223-428
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 44

Conread position: 458-849
Cow position:
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 19

Conread position: 462-849
Cow position:
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 120

Conread position: 466-852
Cow position:
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 135

Conread position: 468-851
Cow position:
Alignm length: 392
Alignm identity: 255
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 84, 105

Conread position: 468-852
Cow position:
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 469-847
Cow position:
Alignm length: 381
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 203

Conread position: 469-852
Cow position:
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 214

Conread position: 475-852
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 476-720
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 110

Conread position: 476-769
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 476-838
Cow position:
Alignm length: 366
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 103

Conread position: 476-848
Cow position:
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 46

Conread position: 476-849
Cow position:
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-849
Cow position:
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 362

Conread position: 476-852
Cow position:
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 190

Conread position: 476-852
Cow position:
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 367

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 35

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 114

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 477-619
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 477-800
Cow position:
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 477-834
Cow position:
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 477-851
Cow position:
Alignm length: 376
Alignm identity: 243
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 62, 45

Conread position: 477-851
Cow position:
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 60

Conread position: 477-851
Cow position:
Alignm length: 379
Alignm identity: 250
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 85, 105

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 123

Conread position: 477-852
Cow position:
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 292

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 87

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 95

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 104

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 477-852
Cow position:
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 46

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 84

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 98

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 94

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 84

Conread position: 477-860
Cow position:
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 67

Conread position: 478-802
Cow position:
Alignm length: 326
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 197

Conread position: 478-849
Cow position:
Alignm length: 375
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 102

Conread position: 478-852
Cow position:
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 480-852
Cow position:
Alignm length: 373
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 480-852
Cow position:
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 216

Conread position: 484-850
Cow position:
Alignm length: 368
Alignm identity: 244
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 213, 56

Conread position: 487-852
Cow position:
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 24

Conread position: 488-852
Cow position:
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 489-832
Cow position:
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 72

Conread position: 489-852
Cow position:
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 289

Conread position: 494-848
Cow position:
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 10

Conread position: 494-849
Cow position:
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 83

Conread position: 494-852
Cow position:
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 68

Conread position: 497-852
Cow position:
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 498-851
Cow position:
Alignm length: 356
Alignm identity: 235
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 65, 73

Conread position: 500-851
Cow position:
Alignm length: 355
Alignm identity: 239
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 63, 44

Conread position: 501-852
Cow position:
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 0

Conread position: 517-849
Cow position:
Alignm length: 350
Alignm identity: 241
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 12

Conread position: 518-852
Cow position:
Alignm length: 336
Alignm identity: 217
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 104, 81

Conread position: 581-850
Cow position:
Alignm length: 273
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 253

Conread position: 583-823
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 601-851
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 80, 33

Conread position: 671-852
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 21

Conread position: 675-843
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 102, 0

Conread position: 700-852
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 137, 0

Conread position: 708-852
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 708-852
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 127, 0

Show alignments to all cow chromosomes.