Cow genome map
Conread name: | Ss1.1-Pig4-TMW8025D03.5 |
Conread position: | 221-402 |
Cow position: | chr22:17072956-17073136 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 131 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 28, 46 |
Conread position: | 221-428 |
Cow position: | chr22:8880344-8880547 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 236-485 |
Cow position: | chr22:1320728-1320980 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 180 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 196, 47 |
Conread position: | 453-849 |
Cow position: | chr22:118251-117852 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 235 |
Conread position: | 466-725 |
Cow position: | chr22:36534387-36534126 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 467-852 |
Cow position: | chr22:36861951-36861567 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 370, 0 |
Conread position: | 475-692 |
Cow position: | chr22:42771134-42771352 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 157 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 475-849 |
Cow position: | chr22:1270918-1270550 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 69 |
Conread position: | 475-849 |
Cow position: | chr22:1285343-1284971 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 9 |
Conread position: | 475-851 |
Cow position: | chr22:7277106-7277488 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 475-852 |
Cow position: | chr22:36736362-36736726 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 475-852 |
Cow position: | chr22:39469930-39469556 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 475-864 |
Cow position: | chr22:10077160-10076780 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 35 |
Conread position: | 476-770 |
Cow position: | chr22:44456900-44457198 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 246 |
Conread position: | 476-771 |
Cow position: | chr22:46585723-46585428 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 476-804 |
Cow position: | chr22:42747115-42747431 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 218 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 21, 14 |
Conread position: | 476-815 |
Cow position: | chr22:44395371-44395708 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 476-841 |
Cow position: | chr22:21588921-21589280 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 0 |
Conread position: | 476-849 |
Cow position: | chr22:1293902-1293536 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 55 |
Conread position: | 476-849 |
Cow position: | chr22:35672767-35672395 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 100 |
Conread position: | 476-851 |
Cow position: | chr22:309312-309676 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 253 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 260, 64 |
Conread position: | 476-852 |
Cow position: | chr22:327560-327196 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 199 |
Conread position: | 476-852 |
Cow position: | chr22:561110-560742 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 18 |
Conread position: | 476-852 |
Cow position: | chr22:6984843-6985218 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 100 |
Conread position: | 476-852 |
Cow position: | chr22:17329148-17328776 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 476-852 |
Cow position: | chr22:19144109-19143736 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 0 |
Conread position: | 476-852 |
Cow position: | chr22:31312933-31313304 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 476-852 |
Cow position: | chr22:31335444-31335070 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 0 |
Conread position: | 476-852 |
Cow position: | chr22:34167920-34168295 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 0 |
Conread position: | 476-852 |
Cow position: | chr22:42990760-42991135 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 0 |
Conread position: | 476-852 |
Cow position: | chr22:44933568-44933943 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 216 |
Conread position: | 477-727 |
Cow position: | chr22:41420095-41419849 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 181 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 108, 193 |
Conread position: | 477-771 |
Cow position: | chr22:13772385-13772664 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 210 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 477-771 |
Cow position: | chr22:37067319-37067031 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 210 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 112, 56 |
Conread position: | 477-811 |
Cow position: | chr22:6504064-6503741 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 27 |
Conread position: | 477-849 |
Cow position: | chr22:3278760-3278394 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 84 |
Conread position: | 477-849 |
Cow position: | chr22:5307707-5308063 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 249, 0 |
Conread position: | 477-851 |
Cow position: | chr22:693229-693594 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 108 |
Conread position: | 477-851 |
Cow position: | chr22:1318984-1319359 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 285 |
Conread position: | 477-851 |
Cow position: | chr22:15850935-15851298 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 54 |
Conread position: | 477-851 |
Cow position: | chr22:18816792-18816417 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 149 |
Conread position: | 477-851 |
Cow position: | chr22:32348375-32348016 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 247 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 330, 63 |
Conread position: | 477-852 |
Cow position: | chr22:302394-302027 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 249 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 34, 104 |
Conread position: | 477-852 |
Cow position: | chr22:1321213-1321575 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 477-852 |
Cow position: | chr22:5233707-5233342 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 84 |
Conread position: | 477-852 |
Cow position: | chr22:5672328-5672700 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 0 |
Conread position: | 477-852 |
Cow position: | chr22:10546240-10546608 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 99 |
Conread position: | 477-852 |
Cow position: | chr22:27310187-27309810 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 361 |
Conread position: | 477-852 |
Cow position: | chr22:37131240-37131611 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 98 |
Conread position: | 477-852 |
Cow position: | chr22:39882583-39882213 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 0 |
Conread position: | 477-852 |
Cow position: | chr22:44353358-44352993 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 297, 0 |
Conread position: | 477-852 |
Cow position: | chr22:44609208-44609563 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 248 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 34, 50 |
Conread position: | 477-852 |
Cow position: | chr22:46636106-46635743 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 74 |
Conread position: | 477-852 |
Cow position: | chr22:46852932-46853305 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 98 |
Conread position: | 483-852 |
Cow position: | chr22:158319-157939 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 368 |
Conread position: | 487-678 |
Cow position: | chr22:526309-526119 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 487-833 |
Cow position: | chr22:35943793-35943454 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 220 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 76, 44 |
Conread position: | 497-818 |
Cow position: | chr22:18476151-18475836 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 83 |
Conread position: | 497-833 |
Cow position: | chr22:44489496-44489832 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 154 |
Conread position: | 497-841 |
Cow position: | chr22:16200104-16200439 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 79 |
Conread position: | 497-844 |
Cow position: | chr22:10910242-10909882 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 79 |
Conread position: | 497-851 |
Cow position: | chr22:33350776-33351131 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 239 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 80, 106 |
Conread position: | 497-852 |
Cow position: | chr22:24949439-24949793 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 195 |
Conread position: | 497-852 |
Cow position: | chr22:32485718-32485389 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 497-852 |
Cow position: | chr22:37265061-37265417 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 187 |
Conread position: | 497-852 |
Cow position: | chr22:44370004-44369656 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 64 |
Conread position: | 498-851 |
Cow position: | chr22:293542-293195 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 233 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 67, 29 |
Conread position: | 501-852 |
Cow position: | chr22:8136578-8136238 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 29 |
Conread position: | 504-852 |
Cow position: | chr22:3307102-3306770 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 508-851 |
Cow position: | chr22:9657944-9658284 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 243 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 22, 60 |
Conread position: | 508-852 |
Cow position: | chr22:15957068-15956732 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 227 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 59, 37 |
Conread position: | 516-796 |
Cow position: | chr22:4065269-4065549 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 60 |
Conread position: | 519-833 |
Cow position: | chr22:1878425-1878737 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 71 |
Conread position: | 521-852 |
Cow position: | chr22:5933348-5933021 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 30 |
Conread position: | 541-849 |
Cow position: | chr22:37073515-37073230 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 217 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 13, 126 |
Conread position: | 543-851 |
Cow position: | chr22:36267032-36267332 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 207 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 97, 132 |
Conread position: | 576-851 |
Cow position: | chr22:34598366-34598632 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 203 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 89, 58 |
Conread position: | 595-852 |
Cow position: | chr22:11030666-11030923 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 189 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 9, 99 |
Conread position: | 613-848 |
Cow position: | chr22:36183484-36183718 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 168 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 75, 32 |
Conread position: | 620-852 |
Cow position: | chr22:27283781-27284007 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 175 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 77, 72 |
Conread position: | 621-852 |
Cow position: | chr22:27386698-27386468 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 170 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 216, 0 |
Conread position: | 657-852 |
Cow position: | chr22:536870-537064 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 145 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 182, 0 |
Conread position: | 659-851 |
Cow position: | chr22:13917278-13917465 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 145 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 667-811 |
Cow position: | chr22:12732065-12731921 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 107 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 667-852 |
Cow position: | chr22:15314169-15313987 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 129 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 683-849 |
Cow position: | chr22:525881-525720 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 103, 68 |
Conread position: | 718-852 |
Cow position: | chr22:46547834-46547701 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 121, 0 |
Show alignments to all cow chromosomes.