Cow genome map
Conread name: | Ss1.1-Pig4-TMW8025D03.5 |
Conread position: | 449-853 |
Cow position: | chr23:16481789-16481394 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 0 |
Conread position: | 466-852 |
Cow position: | chr23:4276536-4276918 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 199 |
Conread position: | 466-852 |
Cow position: | chr23:5875194-5874811 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 210 |
Conread position: | 475-848 |
Cow position: | chr23:4434059-4434421 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 476-672 |
Cow position: | chr23:14975173-14974984 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 142 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 476-749 |
Cow position: | chr23:1141158-1141418 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 195 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 476-804 |
Cow position: | chr23:2715940-2716263 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 100 |
Conread position: | 476-828 |
Cow position: | chr23:19449612-19449963 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 227 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 88, 223 |
Conread position: | 476-838 |
Cow position: | chr23:22147670-22147300 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 0 |
Conread position: | 476-841 |
Cow position: | chr23:19489129-19489491 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 0 |
Conread position: | 476-846 |
Cow position: | chr23:4509695-4510056 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 0 |
Conread position: | 476-848 |
Cow position: | chr23:4641036-4640664 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 476-852 |
Cow position: | chr23:967759-967382 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 363 |
Conread position: | 476-852 |
Cow position: | chr23:2027537-2027155 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 208 |
Conread position: | 476-852 |
Cow position: | chr23:2795973-2795602 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 0 |
Conread position: | 476-852 |
Cow position: | chr23:3882106-3881735 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 0 |
Conread position: | 476-852 |
Cow position: | chr23:4815663-4816036 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 476-852 |
Cow position: | chr23:11778075-11778435 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 113 |
Conread position: | 476-852 |
Cow position: | chr23:15220304-15219925 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 310, 103 |
Conread position: | 476-852 |
Cow position: | chr23:15525202-15525573 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 476-852 |
Cow position: | chr23:27399091-27399467 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 362 |
Conread position: | 476-852 |
Cow position: | chr23:28913001-28913374 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 255, 295 |
Conread position: | 476-852 |
Cow position: | chr23:36031781-36031410 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 199 |
Conread position: | 477-672 |
Cow position: | chr23:14966383-14966188 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 148 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 477-771 |
Cow position: | chr23:31595593-31595294 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 128 |
Conread position: | 477-785 |
Cow position: | chr23:1330696-1330392 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 477-820 |
Cow position: | chr23:2765778-2765449 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 477-822 |
Cow position: | chr23:2574155-2574500 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 118 |
Conread position: | 477-851 |
Cow position: | chr23:2339996-2340365 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 90 |
Conread position: | 477-851 |
Cow position: | chr23:22876037-22875671 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 261 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 9, 28 |
Conread position: | 477-852 |
Cow position: | chr23:16617247-16616886 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 88 |
Conread position: | 477-852 |
Cow position: | chr23:22945471-22945099 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 231 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 116, 27 |
Conread position: | 477-852 |
Cow position: | chr23:34174778-34175146 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 237 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 16, 22 |
Conread position: | 477-855 |
Cow position: | chr23:5779496-5779120 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 216 |
Conread position: | 478-852 |
Cow position: | chr23:1025459-1025098 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 89 |
Conread position: | 478-852 |
Cow position: | chr23:19017300-19017658 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 259 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 85, 93 |
Conread position: | 479-873 |
Cow position: | chr23:7273253-7273631 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 82 |
Conread position: | 481-852 |
Cow position: | chr23:989047-988675 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 211 |
Conread position: | 484-852 |
Cow position: | chr23:3013228-3013609 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 118 |
Conread position: | 487-852 |
Cow position: | chr23:30636702-30636338 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 350, 0 |
Conread position: | 497-841 |
Cow position: | chr23:19950975-19950630 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 85 |
Conread position: | 497-852 |
Cow position: | chr23:20301821-20302178 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 71 |
Conread position: | 498-852 |
Cow position: | chr23:28216902-28217254 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 100 |
Conread position: | 498-852 |
Cow position: | chr23:31446425-31446778 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 87 |
Conread position: | 499-852 |
Cow position: | chr23:4359448-4359793 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 510-667 |
Cow position: | chr23:6469652-6469495 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 114 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 517-849 |
Cow position: | chr23:4751644-4751974 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 223 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 66, 18 |
Conread position: | 520-852 |
Cow position: | chr23:8980856-8980529 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 531-771 |
Cow position: | chr23:2725506-2725740 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 166 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 546-852 |
Cow position: | chr23:15176733-15177038 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 554-852 |
Cow position: | chr23:2313571-2313274 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 22 |
Conread position: | 584-785 |
Cow position: | chr23:16616168-16615971 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 600-849 |
Cow position: | chr23:7750105-7750351 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 166 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 172, 0 |
Conread position: | 609-851 |
Cow position: | chr23:4888402-4888645 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 0 |
Conread position: | 615-945 |
Cow position: | chr23:4650944-4651275 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 100 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 328, 0 |
Conread position: | 637-852 |
Cow position: | chr23:2524446-2524234 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 165 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 60, 55 |
Conread position: | 667-852 |
Cow position: | chr23:14974782-14974598 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 137 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 66, 18 |
Conread position: | 671-852 |
Cow position: | chr23:20156450-20156270 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 141 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 166, 0 |
Show alignments to all cow chromosomes.