Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 449-853
Cow position: chr23:16481789-16481394 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 466-852
Cow position: chr23:4276536-4276918 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 199

Conread position: 466-852
Cow position: chr23:5875194-5874811 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 210

Conread position: 475-848
Cow position: chr23:4434059-4434421 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 476-672
Cow position: chr23:14975173-14974984 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 476-749
Cow position: chr23:1141158-1141418 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 85, 0

Conread position: 476-804
Cow position: chr23:2715940-2716263 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 100

Conread position: 476-828
Cow position: chr23:19449612-19449963 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 227
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 88, 223

Conread position: 476-838
Cow position: chr23:22147670-22147300 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 0

Conread position: 476-841
Cow position: chr23:19489129-19489491 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 476-846
Cow position: chr23:4509695-4510056 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 0

Conread position: 476-848
Cow position: chr23:4641036-4640664 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 476-852
Cow position: chr23:967759-967382 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 363

Conread position: 476-852
Cow position: chr23:2027537-2027155 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 208

Conread position: 476-852
Cow position: chr23:2795973-2795602 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 476-852
Cow position: chr23:3882106-3881735 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 476-852
Cow position: chr23:4815663-4816036 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 476-852
Cow position: chr23:11778075-11778435 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 113

Conread position: 476-852
Cow position: chr23:15220304-15219925 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 103

Conread position: 476-852
Cow position: chr23:15525202-15525573 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-852
Cow position: chr23:27399091-27399467 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 362

Conread position: 476-852
Cow position: chr23:28913001-28913374 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 295

Conread position: 476-852
Cow position: chr23:36031781-36031410 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 199

Conread position: 477-672
Cow position: chr23:14966383-14966188 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 477-771
Cow position: chr23:31595593-31595294 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 128

Conread position: 477-785
Cow position: chr23:1330696-1330392 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 477-820
Cow position: chr23:2765778-2765449 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 477-822
Cow position: chr23:2574155-2574500 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 118

Conread position: 477-851
Cow position: chr23:2339996-2340365 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 90

Conread position: 477-851
Cow position: chr23:22876037-22875671 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 28

Conread position: 477-852
Cow position: chr23:16617247-16616886 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 88

Conread position: 477-852
Cow position: chr23:22945471-22945099 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 231
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 116, 27

Conread position: 477-852
Cow position: chr23:34174778-34175146 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 237
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 22

Conread position: 477-855
Cow position: chr23:5779496-5779120 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 216

Conread position: 478-852
Cow position: chr23:1025459-1025098 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 89

Conread position: 478-852
Cow position: chr23:19017300-19017658 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 85, 93

Conread position: 479-873
Cow position: chr23:7273253-7273631 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 82

Conread position: 481-852
Cow position: chr23:989047-988675 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 211

Conread position: 484-852
Cow position: chr23:3013228-3013609 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 118

Conread position: 487-852
Cow position: chr23:30636702-30636338 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 0

Conread position: 497-841
Cow position: chr23:19950975-19950630 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 85

Conread position: 497-852
Cow position: chr23:20301821-20302178 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 71

Conread position: 498-852
Cow position: chr23:28216902-28217254 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 100

Conread position: 498-852
Cow position: chr23:31446425-31446778 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 87

Conread position: 499-852
Cow position: chr23:4359448-4359793 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 510-667
Cow position: chr23:6469652-6469495 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 517-849
Cow position: chr23:4751644-4751974 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 66, 18

Conread position: 520-852
Cow position: chr23:8980856-8980529 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 531-771
Cow position: chr23:2725506-2725740 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 33

Conread position: 546-852
Cow position: chr23:15176733-15177038 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 554-852
Cow position: chr23:2313571-2313274 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 584-785
Cow position: chr23:16616168-16615971 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 600-849
Cow position: chr23:7750105-7750351 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 172, 0

Conread position: 609-851
Cow position: chr23:4888402-4888645 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 615-945
Cow position: chr23:4650944-4651275 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 328, 0

Conread position: 637-852
Cow position: chr23:2524446-2524234 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 55

Conread position: 667-852
Cow position: chr23:14974782-14974598 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 66, 18

Conread position: 671-852
Cow position: chr23:20156450-20156270 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 166, 0

Show alignments to all cow chromosomes.