Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 411-852
Cow position:
Alignm length: 450
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 8

Conread position: 416-855
Cow position:
Alignm length: 441
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 12

Conread position: 450-852
Cow position:
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 216

Conread position: 464-852
Cow position:
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 210

Conread position: 474-753
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 211, 93

Conread position: 474-852
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 474-852
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 475-802
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 98

Conread position: 475-851
Cow position:
Alignm length: 383
Alignm identity: 241
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 41

Conread position: 475-851
Cow position:
Alignm length: 378
Alignm identity: 246
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 114, 177

Conread position: 475-852
Cow position:
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 475-852
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 475-876
Cow position:
Alignm length: 405
Alignm identity: 265
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 372, 46

Conread position: 476-676
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 476-720
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 85, 95

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 0

Conread position: 476-849
Cow position:
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 197

Conread position: 476-851
Cow position:
Alignm length: 377
Alignm identity: 252
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 223, 56

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 262
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 68, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-869
Cow position:
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 247

Conread position: 477-635
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 0

Conread position: 477-720
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 199, 0

Conread position: 477-726
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 477-752
Cow position:
Alignm length: 277
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 192, 66

Conread position: 477-804
Cow position:
Alignm length: 333
Alignm identity: 212
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 237, 86

Conread position: 477-810
Cow position:
Alignm length: 335
Alignm identity: 228
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 248, 72

Conread position: 477-823
Cow position:
Alignm length: 351
Alignm identity: 226
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 137, 122

Conread position: 477-838
Cow position:
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 94

Conread position: 477-848
Cow position:
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 45

Conread position: 477-850
Cow position:
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 477-851
Cow position:
Alignm length: 380
Alignm identity: 242
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 56, 43

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 197

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 98

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 95

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 94

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 94

Conread position: 477-855
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 153

Conread position: 477-876
Cow position:
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 129

Conread position: 478-835
Cow position:
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 478-851
Cow position:
Alignm length: 393
Alignm identity: 261
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 228, 102

Conread position: 479-636
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 479-832
Cow position:
Alignm length: 355
Alignm identity: 233
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 93

Conread position: 479-851
Cow position:
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 480-724
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 157, 81

Conread position: 487-710
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 42, 77

Conread position: 487-852
Cow position:
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 208

Conread position: 490-852
Cow position:
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 165

Conread position: 497-833
Cow position:
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 26

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 339

Conread position: 497-852
Cow position:
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 497-852
Cow position:
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 498-850
Cow position:
Alignm length: 355
Alignm identity: 227
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 63, 73

Conread position: 502-756
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 77, 102

Conread position: 526-852
Cow position:
Alignm length: 339
Alignm identity: 235
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 41

Conread position: 531-852
Cow position:
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 45

Conread position: 540-852
Cow position:
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 42

Conread position: 634-852
Cow position:
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 648-852
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 189, 0

Conread position: 656-849
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 179, 0

Conread position: 659-849
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 180

Conread position: 667-829
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 717-852
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 120, 0

Show alignments to all cow chromosomes.