Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025D03.5 |
| Conread position: | 240-422 |
| Cow position: | chr26:9089928-9090107 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 469-852 |
| Cow position: | chr26:3691445-3691832 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 202 |
| Conread position: | 473-852 |
| Cow position: | chr26:25033612-25033988 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 90, 83 |
| Conread position: | 476-625 |
| Cow position: | chr26:30590588-30590439 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 476-688 |
| Cow position: | chr26:19998139-19998351 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 85, 109 |
| Conread position: | 476-849 |
| Cow position: | chr26:17397279-17396908 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 344 |
| Conread position: | 476-852 |
| Cow position: | chr26:6850522-6850148 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 0 |
| Conread position: | 476-852 |
| Cow position: | chr26:9563706-9563331 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 0 |
| Conread position: | 477-637 |
| Cow position: | chr26:19142377-19142535 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 135, 92 |
| Conread position: | 477-674 |
| Cow position: | chr26:12655611-12655796 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 477-680 |
| Cow position: | chr26:9846482-9846278 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 477-717 |
| Cow position: | chr26:3031156-3030917 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 87, 99 |
| Conread position: | 477-797 |
| Cow position: | chr26:9850990-9850649 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 477-797 |
| Cow position: | chr26:9854454-9854115 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 477-815 |
| Cow position: | chr26:9112119-9112457 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 94 |
| Conread position: | 477-841 |
| Cow position: | chr26:15145104-15144744 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 38 |
| Conread position: | 477-848 |
| Cow position: | chr26:23605256-23604878 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 64 |
| Conread position: | 477-849 |
| Cow position: | chr26:20254728-20255094 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 103 |
| Conread position: | 477-851 |
| Cow position: | chr26:3074187-3074553 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 214, 77 |
| Conread position: | 477-852 |
| Cow position: | chr26:12574743-12574370 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 214 |
| Conread position: | 477-852 |
| Cow position: | chr26:18854748-18855115 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 84 |
| Conread position: | 477-861 |
| Cow position: | chr26:15553597-15553230 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 186, 50 |
| Conread position: | 478-749 |
| Cow position: | chr26:30782423-30782690 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 86, 113 |
| Conread position: | 478-852 |
| Cow position: | chr26:19535838-19536211 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 110, 141 |
| Conread position: | 480-852 |
| Cow position: | chr26:19351857-19351488 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 0 |
| Conread position: | 491-852 |
| Cow position: | chr26:4605513-4605157 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 494-848 |
| Cow position: | chr26:5674837-5675182 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 217 |
| Conread position: | 495-852 |
| Cow position: | chr26:2352680-2352332 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 66 |
| Conread position: | 497-710 |
| Cow position: | chr26:24201295-24201505 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 497-833 |
| Cow position: | chr26:12588888-12588556 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 497-852 |
| Cow position: | chr26:8869550-8869903 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 0 |
| Conread position: | 504-849 |
| Cow position: | chr26:11254378-11254033 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 520-852 |
| Cow position: | chr26:2198329-2198654 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 533-849 |
| Cow position: | chr26:11537123-11536811 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 11 |
| Conread position: | 600-852 |
| Cow position: | chr26:30589592-30589351 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 627-805 |
| Cow position: | chr26:6602009-6602188 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 664-846 |
| Cow position: | chr26:9845768-9845592 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 667-852 |
| Cow position: | chr26:12656138-12656320 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 135, 27 |
| Conread position: | 677-849 |
| Cow position: | chr26:12659837-12659666 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 155, 0 |
Show alignments to all cow chromosomes.