Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025D03.5 |
| Conread position: | 474-836 |
| Cow position: | chr27:28890320-28890675 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 151, 93 |
| Conread position: | 475-849 |
| Cow position: | chr27:16034805-16034432 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 141 |
| Conread position: | 476-628 |
| Cow position: | chr27:11471802-11471652 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 476-796 |
| Cow position: | chr27:13897785-13898100 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 476-849 |
| Cow position: | chr27:5910456-5910823 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 158 |
| Conread position: | 476-852 |
| Cow position: | chr27:892804-893173 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 476-852 |
| Cow position: | chr27:1208942-1209315 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 476-852 |
| Cow position: | chr27:9993602-9993242 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 476-852 |
| Cow position: | chr27:14460867-14460493 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 476-852 |
| Cow position: | chr27:23334753-23335125 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 476-852 |
| Cow position: | chr27:25805288-25804920 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 476-852 |
| Cow position: | chr27:27662483-27662863 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 350 |
| Conread position: | 477-775 |
| Cow position: | chr27:25116843-25117131 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 477-775 |
| Cow position: | chr27:27051254-27051552 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 477-849 |
| Cow position: | chr27:26324404-26324776 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 361 |
| Conread position: | 477-849 |
| Cow position: | chr27:26556385-26556025 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 99 |
| Conread position: | 477-851 |
| Cow position: | chr27:16438924-16439286 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 87 |
| Conread position: | 477-852 |
| Cow position: | chr27:15540918-15541292 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 0 |
| Conread position: | 487-649 |
| Cow position: | chr27:16432071-16432234 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 487-852 |
| Cow position: | chr27:15278465-15278103 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 287 |
| Conread position: | 488-851 |
| Cow position: | chr27:3996767-3996413 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 219, 88 |
| Conread position: | 497-833 |
| Cow position: | chr27:2364361-2364695 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 195 |
| Conread position: | 497-849 |
| Cow position: | chr27:25002923-25002570 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 197 |
| Conread position: | 571-797 |
| Cow position: | chr27:5997044-5996823 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 576-849 |
| Cow position: | chr27:26226992-26227254 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.