Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 212-428
Cow position:
Alignm length: 219
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 53

Conread position: 221-464
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 210, 156

Conread position: 221-481
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 44, 39

Conread position: 223-428
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 223-430
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 43

Conread position: 411-625
Cow position:
Alignm length: 217
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 8

Conread position: 466-838
Cow position:
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 106

Conread position: 466-852
Cow position:
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 121

Conread position: 474-851
Cow position:
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 103

Conread position: 476-619
Cow position:
Alignm length: 144
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 476-620
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 476-625
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 476-625
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 108, 0

Conread position: 476-628
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 476-769
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 476-836
Cow position:
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 0

Conread position: 476-836
Cow position:
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 476-841
Cow position:
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 216

Conread position: 476-842
Cow position:
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 0

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 476-849
Cow position:
Alignm length: 374
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-849
Cow position:
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 0

Conread position: 476-849
Cow position:
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 28

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 199

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 292

Conread position: 476-861
Cow position:
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 477-607
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 477-639
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 84, 94

Conread position: 477-784
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 46

Conread position: 477-791
Cow position:
Alignm length: 322
Alignm identity: 211
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 13

Conread position: 477-807
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 102, 0

Conread position: 477-841
Cow position:
Alignm length: 367
Alignm identity: 227
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 126

Conread position: 477-842
Cow position:
Alignm length: 368
Alignm identity: 238
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 86, 47

Conread position: 477-851
Cow position:
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 185

Conread position: 477-851
Cow position:
Alignm length: 375
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 34

Conread position: 477-852
Cow position:
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 202

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 199

Conread position: 477-852
Cow position:
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 33

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 279

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 94

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 94

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 480-873
Cow position:
Alignm length: 395
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 192

Conread position: 481-771
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 223

Conread position: 486-852
Cow position:
Alignm length: 367
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 487-717
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 90, 164

Conread position: 487-828
Cow position:
Alignm length: 345
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 77, 95

Conread position: 497-852
Cow position:
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 64

Conread position: 497-852
Cow position:
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 501-681
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 172, 0

Conread position: 504-638
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 505-852
Cow position:
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 60

Conread position: 516-848
Cow position:
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 0

Conread position: 518-749
Cow position:
Alignm length: 232
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 521-851
Cow position:
Alignm length: 333
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 220, 111

Conread position: 523-851
Cow position:
Alignm length: 341
Alignm identity: 229
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 70, 140

Conread position: 599-771
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 75

Conread position: 604-852
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 12, 148

Conread position: 611-835
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 143, 0

Conread position: 614-852
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 223, 0

Conread position: 615-874
Cow position:
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 224

Conread position: 616-843
Cow position:
Alignm length: 228
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 640-851
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 93, 63

Conread position: 645-797
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 667-855
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 170, 0

Conread position: 668-852
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 19

Show alignments to all cow chromosomes.