Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 218-406
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 160, 0

Conread position: 221-436
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 221-481
Cow position:
Alignm length: 263
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 211, 38

Conread position: 221-524
Cow position:
Alignm length: 305
Alignm identity: 206
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 46, 157

Conread position: 223-382
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 224-852
Cow position:
Alignm length: 634
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 43

Conread position: 229-464
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 201, 145

Conread position: 265-481
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 116

Conread position: 461-852
Cow position:
Alignm length: 393
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 468-749
Cow position:
Alignm length: 282
Alignm identity: 171
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 205, 0

Conread position: 469-852
Cow position:
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 96

Conread position: 469-852
Cow position:
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 57

Conread position: 474-852
Cow position:
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 87

Conread position: 475-749
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 60

Conread position: 476-685
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 166, 0

Conread position: 476-745
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 99

Conread position: 476-834
Cow position:
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 113

Conread position: 476-838
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 178

Conread position: 476-842
Cow position:
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 200

Conread position: 476-844
Cow position:
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-848
Cow position:
Alignm length: 374
Alignm identity: 250
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 182, 67

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 476-849
Cow position:
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 106

Conread position: 476-849
Cow position:
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 221

Conread position: 476-851
Cow position:
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 40

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 476-852
Cow position:
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 354

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 76

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 0

Conread position: 476-852
Cow position:
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 198

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 189

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 95

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-861
Cow position:
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 49

Conread position: 477-610
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 477-624
Cow position:
Alignm length: 148
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 477-652
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 94

Conread position: 477-714
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 113

Conread position: 477-736
Cow position:
Alignm length: 261
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 223, 48

Conread position: 477-810
Cow position:
Alignm length: 334
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 477-823
Cow position:
Alignm length: 348
Alignm identity: 235
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 88, 53

Conread position: 477-829
Cow position:
Alignm length: 355
Alignm identity: 220
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 30

Conread position: 477-833
Cow position:
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 116

Conread position: 477-836
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 201, 29

Conread position: 477-838
Cow position:
Alignm length: 362
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 0

Conread position: 477-841
Cow position:
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 91

Conread position: 477-842
Cow position:
Alignm length: 369
Alignm identity: 237
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 109, 95

Conread position: 477-844
Cow position:
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 24

Conread position: 477-848
Cow position:
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 123

Conread position: 477-851
Cow position:
Alignm length: 376
Alignm identity: 261
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 220, 27

Conread position: 477-851
Cow position:
Alignm length: 382
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 204

Conread position: 477-851
Cow position:
Alignm length: 381
Alignm identity: 239
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 161

Conread position: 477-851
Cow position:
Alignm length: 384
Alignm identity: 252
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 193, 98

Conread position: 477-851
Cow position:
Alignm length: 375
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 477-852
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 118

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 13

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 61

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 33

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 84

Conread position: 477-852
Cow position:
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 291

Conread position: 477-852
Cow position:
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 215

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 193

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 102

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 52

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 45

Conread position: 477-858
Cow position:
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 48

Conread position: 478-797
Cow position:
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 478-842
Cow position:
Alignm length: 365
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 478-848
Cow position:
Alignm length: 371
Alignm identity: 245
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 0

Conread position: 478-852
Cow position:
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 0

Conread position: 478-852
Cow position:
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 104

Conread position: 478-852
Cow position:
Alignm length: 375
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 0

Conread position: 479-841
Cow position:
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 0

Conread position: 480-850
Cow position:
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 50

Conread position: 484-820
Cow position:
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 87

Conread position: 484-849
Cow position:
Alignm length: 370
Alignm identity: 257
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 209, 80

Conread position: 484-851
Cow position:
Alignm length: 374
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 487-850
Cow position:
Alignm length: 368
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 97

Conread position: 487-851
Cow position:
Alignm length: 370
Alignm identity: 238
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 79, 85

Conread position: 488-851
Cow position:
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 30

Conread position: 489-833
Cow position:
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 489-852
Cow position:
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 87

Conread position: 489-852
Cow position:
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 72

Conread position: 490-851
Cow position:
Alignm length: 374
Alignm identity: 239
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 75, 33

Conread position: 496-852
Cow position:
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 79

Conread position: 497-715
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 0

Conread position: 497-801
Cow position:
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 178

Conread position: 497-833
Cow position:
Alignm length: 350
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 70

Conread position: 497-852
Cow position:
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 74

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 249
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 200, 32

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 79

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 195

Conread position: 497-852
Cow position:
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 86

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 85

Conread position: 498-852
Cow position:
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 194

Conread position: 499-852
Cow position:
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 76

Conread position: 506-852
Cow position:
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 165

Conread position: 509-851
Cow position:
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 39

Conread position: 512-836
Cow position:
Alignm length: 326
Alignm identity: 208
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 110, 90

Conread position: 516-850
Cow position:
Alignm length: 337
Alignm identity: 220
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 50

Conread position: 528-869
Cow position:
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 51

Conread position: 548-861
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 24

Conread position: 565-851
Cow position:
Alignm length: 288
Alignm identity: 193
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 177, 14

Conread position: 575-852
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 242

Conread position: 576-850
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 582-852
Cow position:
Alignm length: 272
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 257

Conread position: 583-852
Cow position:
Alignm length: 271
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 156

Conread position: 594-851
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 84

Conread position: 595-852
Cow position:
Alignm length: 258
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 0

Conread position: 616-852
Cow position:
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 75

Conread position: 659-851
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 118, 0

Conread position: 659-852
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 180, 0

Conread position: 667-852
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 79

Conread position: 667-852
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 668-838
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 23

Conread position: 676-848
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 683-848
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 724-852
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 0

Show alignments to all cow chromosomes.