Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025D03.5 |
| Conread position: | 218-406 |
| Cow position: | chr3:3979287-3979474 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 221-436 |
| Cow position: | chr3:15055065-15054864 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 221-481 |
| Cow position: | chr3:52865728-52865471 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 211, 38 |
| Conread position: | 221-524 |
| Cow position: | chr3:3907914-3907619 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 46, 157 |
| Conread position: | 223-382 |
| Cow position: | chr3:60891164-60891321 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 224-852 |
| Cow position: | chr3:58946733-58947348 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 229-464 |
| Cow position: | chr3:17950696-17950931 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 201, 145 |
| Conread position: | 265-481 |
| Cow position: | chr3:39325762-39325985 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 461-852 |
| Cow position: | chr3:70084135-70083754 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 468-749 |
| Cow position: | chr3:7168113-7168393 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 469-852 |
| Cow position: | chr3:472062-472423 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 96 |
| Conread position: | 469-852 |
| Cow position: | chr3:66119164-66119546 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 474-852 |
| Cow position: | chr3:15989512-15989144 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 87 |
| Conread position: | 475-749 |
| Cow position: | chr3:49309159-49308894 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 60 |
| Conread position: | 476-685 |
| Cow position: | chr3:5996350-5996144 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 476-745 |
| Cow position: | chr3:14440210-14439943 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 99 |
| Conread position: | 476-834 |
| Cow position: | chr3:19943596-19943935 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 113 |
| Conread position: | 476-838 |
| Cow position: | chr3:56340903-56340549 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 178 |
| Conread position: | 476-842 |
| Cow position: | chr3:36691673-36691311 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 200 |
| Conread position: | 476-844 |
| Cow position: | chr3:47273449-47273096 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 476-848 |
| Cow position: | chr3:60210648-60210292 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 182, 67 |
| Conread position: | 476-848 |
| Cow position: | chr3:75041628-75041278 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 476-849 |
| Cow position: | chr3:3522531-3522903 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 106 |
| Conread position: | 476-849 |
| Cow position: | chr3:23291888-23291518 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 221 |
| Conread position: | 476-851 |
| Cow position: | chr3:594109-594471 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 40 |
| Conread position: | 476-852 |
| Cow position: | chr3:2711441-2711069 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 476-852 |
| Cow position: | chr3:5954654-5954295 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 476-852 |
| Cow position: | chr3:18542893-18542517 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 354 |
| Conread position: | 476-852 |
| Cow position: | chr3:18811021-18811395 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 76 |
| Conread position: | 476-852 |
| Cow position: | chr3:19938430-19938804 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 0 |
| Conread position: | 476-852 |
| Cow position: | chr3:30314077-30314457 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 198 |
| Conread position: | 476-852 |
| Cow position: | chr3:34031380-34031007 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 476-852 |
| Cow position: | chr3:38865925-38866289 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 476-852 |
| Cow position: | chr3:40822905-40823278 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 0 |
| Conread position: | 476-852 |
| Cow position: | chr3:48061305-48060939 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 476-852 |
| Cow position: | chr3:56650748-56650377 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 189 |
| Conread position: | 476-852 |
| Cow position: | chr3:57485205-57484836 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 476-852 |
| Cow position: | chr3:57856253-57856628 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 95 |
| Conread position: | 476-852 |
| Cow position: | chr3:59860882-59861257 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 0 |
| Conread position: | 476-852 |
| Cow position: | chr3:64017847-64017473 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 0 |
| Conread position: | 476-852 |
| Cow position: | chr3:69932914-69933285 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 0 |
| Conread position: | 476-852 |
| Cow position: | chr3:72629588-72629960 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 476-861 |
| Cow position: | chr3:42431752-42432130 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 49 |
| Conread position: | 477-610 |
| Cow position: | chr3:18464232-18464099 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 477-624 |
| Cow position: | chr3:66637564-66637711 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 477-652 |
| Cow position: | chr3:24359779-24359954 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 84, 94 |
| Conread position: | 477-714 |
| Cow position: | chr3:13513683-13513450 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 102, 113 |
| Conread position: | 477-736 |
| Cow position: | chr3:19801945-19802200 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 223, 48 |
| Conread position: | 477-810 |
| Cow position: | chr3:52865227-52864899 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 477-823 |
| Cow position: | chr3:45775549-45775211 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 88, 53 |
| Conread position: | 477-829 |
| Cow position: | chr3:49140889-49140542 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 477-833 |
| Cow position: | chr3:64650150-64650505 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 116 |
| Conread position: | 477-836 |
| Cow position: | chr3:36126921-36127266 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 201, 29 |
| Conread position: | 477-838 |
| Cow position: | chr3:207642-207284 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 0 |
| Conread position: | 477-841 |
| Cow position: | chr3:45032259-45032622 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 91 |
| Conread position: | 477-842 |
| Cow position: | chr3:78019013-78019378 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 109, 95 |
| Conread position: | 477-844 |
| Cow position: | chr3:57499992-57499634 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 477-848 |
| Cow position: | chr3:5047666-5047296 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 123 |
| Conread position: | 477-851 |
| Cow position: | chr3:3805896-3806235 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 220, 27 |
| Conread position: | 477-851 |
| Cow position: | chr3:21945891-21945517 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 204 |
| Conread position: | 477-851 |
| Cow position: | chr3:36099190-36098815 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 161 |
| Conread position: | 477-851 |
| Cow position: | chr3:58208572-58208199 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 193, 98 |
| Conread position: | 477-851 |
| Cow position: | chr3:64358642-64358277 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:2633445-2633816 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 118 |
| Conread position: | 477-852 |
| Cow position: | chr3:2653639-2653997 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:2909559-2909203 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 477-852 |
| Cow position: | chr3:2916987-2917352 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 477-852 |
| Cow position: | chr3:3054130-3054490 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 477-852 |
| Cow position: | chr3:4285406-4285777 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:5830105-5829737 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 84 |
| Conread position: | 477-852 |
| Cow position: | chr3:6684970-6685352 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 291 |
| Conread position: | 477-852 |
| Cow position: | chr3:9716329-9716705 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 215 |
| Conread position: | 477-852 |
| Cow position: | chr3:10239170-10239540 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:17829129-17828758 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 99 |
| Conread position: | 477-852 |
| Cow position: | chr3:19757442-19757068 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:21183164-21182793 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:22335415-22335784 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:31354735-31354367 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:36882394-36882027 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:39326209-39326579 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 193 |
| Conread position: | 477-852 |
| Cow position: | chr3:42580447-42580074 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:47082128-47081767 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:48231456-48231108 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:49614455-49614086 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 477-852 |
| Cow position: | chr3:63005624-63005257 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 102 |
| Conread position: | 477-852 |
| Cow position: | chr3:72704715-72705089 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 52 |
| Conread position: | 477-852 |
| Cow position: | chr3:77474282-77474652 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 45 |
| Conread position: | 477-858 |
| Cow position: | chr3:55230187-55229799 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 48 |
| Conread position: | 478-797 |
| Cow position: | chr3:24592091-24591789 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 478-842 |
| Cow position: | chr3:49677281-49677640 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 478-848 |
| Cow position: | chr3:53410449-53410804 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 478-852 |
| Cow position: | chr3:5883059-5883432 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 0 |
| Conread position: | 478-852 |
| Cow position: | chr3:32146566-32146199 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 104 |
| Conread position: | 478-852 |
| Cow position: | chr3:78027892-78027519 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 0 |
| Conread position: | 479-841 |
| Cow position: | chr3:43040172-43039811 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 0 |
| Conread position: | 480-850 |
| Cow position: | chr3:31898448-31898087 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 50 |
| Conread position: | 484-820 |
| Cow position: | chr3:14588213-14588544 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 87 |
| Conread position: | 484-849 |
| Cow position: | chr3:34396523-34396171 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 209, 80 |
| Conread position: | 484-851 |
| Cow position: | chr3:3979917-3980280 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 487-850 |
| Cow position: | chr3:17936535-17936175 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 76, 97 |
| Conread position: | 487-851 |
| Cow position: | chr3:60387904-60388271 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 488-851 |
| Cow position: | chr3:54865152-54864807 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 30 |
| Conread position: | 489-833 |
| Cow position: | chr3:6781920-6782261 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 489-852 |
| Cow position: | chr3:47179674-47179312 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 87 |
| Conread position: | 489-852 |
| Cow position: | chr3:66891424-66891070 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 72 |
| Conread position: | 490-851 |
| Cow position: | chr3:18729612-18729243 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 496-852 |
| Cow position: | chr3:56320849-56321208 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 79 |
| Conread position: | 497-715 |
| Cow position: | chr3:66618727-66618939 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 497-801 |
| Cow position: | chr3:40340424-40340122 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 178 |
| Conread position: | 497-833 |
| Cow position: | chr3:36117204-36117549 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 70 |
| Conread position: | 497-852 |
| Cow position: | chr3:24314016-24314370 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 497-852 |
| Cow position: | chr3:32623464-32623131 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 200, 32 |
| Conread position: | 497-852 |
| Cow position: | chr3:37968622-37968970 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 79 |
| Conread position: | 497-852 |
| Cow position: | chr3:46678375-46678023 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 195 |
| Conread position: | 497-852 |
| Cow position: | chr3:46861761-46861412 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 86 |
| Conread position: | 497-852 |
| Cow position: | chr3:64028545-64028194 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 85 |
| Conread position: | 498-852 |
| Cow position: | chr3:41212199-41211846 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 194 |
| Conread position: | 499-852 |
| Cow position: | chr3:19878202-19878553 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 506-852 |
| Cow position: | chr3:14634557-14634220 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 165 |
| Conread position: | 509-851 |
| Cow position: | chr3:26949066-26949405 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 39 |
| Conread position: | 512-836 |
| Cow position: | chr3:65584060-65583740 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 90 |
| Conread position: | 516-850 |
| Cow position: | chr3:3932322-3932636 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 63, 50 |
| Conread position: | 528-869 |
| Cow position: | chr3:50914879-50915213 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 51 |
| Conread position: | 548-861 |
| Cow position: | chr3:42630601-42630914 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 565-851 |
| Cow position: | chr3:77929201-77928924 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 177, 14 |
| Conread position: | 575-852 |
| Cow position: | chr3:7159127-7158840 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 242 |
| Conread position: | 576-850 |
| Cow position: | chr3:80871524-80871784 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 582-852 |
| Cow position: | chr3:17951983-17952253 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 257 |
| Conread position: | 583-852 |
| Cow position: | chr3:66990426-66990692 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 23, 156 |
| Conread position: | 594-851 |
| Cow position: | chr3:4026910-4027161 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 121, 84 |
| Conread position: | 595-852 |
| Cow position: | chr3:18463940-18463694 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 616-852 |
| Cow position: | chr3:66638396-66638631 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 75 |
| Conread position: | 659-851 |
| Cow position: | chr3:14754596-14754408 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 659-852 |
| Cow position: | chr3:57900915-57901107 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 667-852 |
| Cow position: | chr3:29594911-29595087 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 110, 79 |
| Conread position: | 667-852 |
| Cow position: | chr3:54783251-54783432 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 668-838 |
| Cow position: | chr3:7168503-7168674 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 23 |
| Conread position: | 676-848 |
| Cow position: | chr3:5995978-5995808 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 683-848 |
| Cow position: | chr3:53515343-53515505 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 724-852 |
| Cow position: | chr3:19802424-19802551 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
Show alignments to all cow chromosomes.