Cow genome map
Conread name: | Ss1.1-Pig4-TMW8025D03.5 |
Conread position: | 224-417 |
Cow position: | chr4:1465255-1465064 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 134 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 56, 68 |
Conread position: | 466-852 |
Cow position: | chr4:47718280-47717910 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 81 |
Conread position: | 470-685 |
Cow position: | chr4:33074067-33073855 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 162 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 474-851 |
Cow position: | chr4:51044559-51044196 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 258 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 28, 54 |
Conread position: | 476-669 |
Cow position: | chr4:57978738-57978931 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 145 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 476-689 |
Cow position: | chr4:41118448-41118662 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 159 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 130, 199 |
Conread position: | 476-720 |
Cow position: | chr4:46713011-46712776 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 181 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 476-848 |
Cow position: | chr4:41330761-41331133 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 362 |
Conread position: | 476-848 |
Cow position: | chr4:43880431-43880802 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 476-849 |
Cow position: | chr4:6491025-6490655 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 0 |
Conread position: | 476-849 |
Cow position: | chr4:33493132-33493505 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 362 |
Conread position: | 476-851 |
Cow position: | chr4:4905476-4905847 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 45 |
Conread position: | 476-851 |
Cow position: | chr4:11383752-11384105 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 255 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 325, 62 |
Conread position: | 476-852 |
Cow position: | chr4:355236-355606 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 476-852 |
Cow position: | chr4:1050299-1049923 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 476-852 |
Cow position: | chr4:3960917-3961288 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 476-852 |
Cow position: | chr4:12241899-12241523 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 362 |
Conread position: | 476-852 |
Cow position: | chr4:13491897-13492272 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 215 |
Conread position: | 476-852 |
Cow position: | chr4:17926933-17926559 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 219 |
Conread position: | 476-852 |
Cow position: | chr4:18516217-18516592 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 0 |
Conread position: | 476-852 |
Cow position: | chr4:23114855-23114480 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 100 |
Conread position: | 476-852 |
Cow position: | chr4:29532393-29532018 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 363, 0 |
Conread position: | 476-852 |
Cow position: | chr4:31668638-31669010 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 476-852 |
Cow position: | chr4:36895695-36896070 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 0 |
Conread position: | 476-852 |
Cow position: | chr4:43320315-43319940 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 0 |
Conread position: | 476-852 |
Cow position: | chr4:44724404-44724779 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 0 |
Conread position: | 476-852 |
Cow position: | chr4:48025723-48026093 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 0 |
Conread position: | 476-852 |
Cow position: | chr4:65224213-65223838 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 100 |
Conread position: | 476-853 |
Cow position: | chr4:45049974-45049601 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 253, 196 |
Conread position: | 476-861 |
Cow position: | chr4:24445878-24445497 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 161 |
Conread position: | 477-669 |
Cow position: | chr4:3358047-3358239 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 146 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 477-681 |
Cow position: | chr4:11617760-11617971 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 155 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 477-716 |
Cow position: | chr4:49892921-49893155 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 164 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 88, 94 |
Conread position: | 477-770 |
Cow position: | chr4:9311559-9311852 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 477-833 |
Cow position: | chr4:3125103-3125459 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 215 |
Conread position: | 477-841 |
Cow position: | chr4:16359215-16359569 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 477-850 |
Cow position: | chr4:66925329-66925695 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 43 |
Conread position: | 477-851 |
Cow position: | chr4:21338657-21338297 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 477-851 |
Cow position: | chr4:59517688-59517312 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 247 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 108, 16 |
Conread position: | 477-852 |
Cow position: | chr4:528315-528689 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 98 |
Conread position: | 477-852 |
Cow position: | chr4:602319-602690 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 197 |
Conread position: | 477-852 |
Cow position: | chr4:5879508-5879866 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 34 |
Conread position: | 477-852 |
Cow position: | chr4:47764848-47764474 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 105 |
Conread position: | 477-870 |
Cow position: | chr4:40824929-40824530 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 265 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 11, 100 |
Conread position: | 477-873 |
Cow position: | chr4:54190197-54190577 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 20 |
Conread position: | 478-849 |
Cow position: | chr4:28830364-28830734 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 66 |
Conread position: | 478-852 |
Cow position: | chr4:1464594-1464230 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 71 |
Conread position: | 478-871 |
Cow position: | chr4:8598808-8598435 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 266 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 164, 0 |
Conread position: | 487-811 |
Cow position: | chr4:34185515-34185211 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 231 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 488-852 |
Cow position: | chr4:46663539-46663889 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 494-816 |
Cow position: | chr4:27442435-27442751 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 220 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 183, 66 |
Conread position: | 494-852 |
Cow position: | chr4:101590-101233 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 341, 0 |
Conread position: | 497-672 |
Cow position: | chr4:41954137-41954311 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 497-747 |
Cow position: | chr4:60265445-60265194 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 182 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 153, 79 |
Conread position: | 497-833 |
Cow position: | chr4:157870-158193 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 497-833 |
Cow position: | chr4:16055936-16056282 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 190 |
Conread position: | 497-852 |
Cow position: | chr4:1931278-1930927 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 195 |
Conread position: | 497-852 |
Cow position: | chr4:6269279-6268932 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 64 |
Conread position: | 497-852 |
Cow position: | chr4:13547370-13547724 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 74 |
Conread position: | 498-851 |
Cow position: | chr4:1497410-1497059 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 239 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 65, 73 |
Conread position: | 504-808 |
Cow position: | chr4:58883321-58883029 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 205 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 158, 19 |
Conread position: | 506-811 |
Cow position: | chr4:1371663-1371359 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 216 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 18, 52 |
Conread position: | 517-852 |
Cow position: | chr4:30308089-30307756 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 48 |
Conread position: | 518-848 |
Cow position: | chr4:11393965-11393644 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 217 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 295, 49 |
Conread position: | 533-852 |
Cow position: | chr4:32211544-32211863 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 160 |
Conread position: | 557-852 |
Cow position: | chr4:18425119-18424824 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 121 |
Conread position: | 581-875 |
Cow position: | chr4:10408204-10408498 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 261 |
Conread position: | 586-852 |
Cow position: | chr4:66179554-66179292 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 616-852 |
Cow position: | chr4:12608040-12607809 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 16 |
Conread position: | 627-852 |
Cow position: | chr4:27332926-27333140 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 162 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 162, 47 |
Conread position: | 630-823 |
Cow position: | chr4:33630524-33630716 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 135 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 55, 148 |
Conread position: | 643-845 |
Cow position: | chr4:26887355-26887155 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 154 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 57, 51 |
Conread position: | 657-851 |
Cow position: | chr4:969537-969343 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 135 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 33, 80 |
Conread position: | 667-849 |
Cow position: | chr4:57979143-57979324 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 130 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 170, 0 |
Conread position: | 667-852 |
Cow position: | chr4:11618374-11618553 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 144 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 33, 14 |
Conread position: | 668-844 |
Cow position: | chr4:33073584-33073408 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.