Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 222-427
Cow position:
Alignm length: 208
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 33

Conread position: 222-440
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 33

Conread position: 265-464
Cow position:
Alignm length: 200
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 458-851
Cow position:
Alignm length: 394
Alignm identity: 259
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 459-849
Cow position:
Alignm length: 391
Alignm identity: 262
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 464-852
Cow position:
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 23

Conread position: 464-852
Cow position:
Alignm length: 408
Alignm identity: 286
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 88, 23

Conread position: 466-852
Cow position:
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 467-770
Cow position:
Alignm length: 304
Alignm identity: 200
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 474-848
Cow position:
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 475-770
Cow position:
Alignm length: 298
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 102

Conread position: 475-832
Cow position:
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 218

Conread position: 475-833
Cow position:
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 475-852
Cow position:
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 102

Conread position: 475-852
Cow position:
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 101

Conread position: 475-852
Cow position:
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 209

Conread position: 476-617
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 476-776
Cow position:
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 476-797
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 476-838
Cow position:
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 148

Conread position: 476-841
Cow position:
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 476-849
Cow position:
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-851
Cow position:
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 100

Conread position: 476-851
Cow position:
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 476-852
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 57

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 0

Conread position: 476-852
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 41

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 136

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 47

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 476-880
Cow position:
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 198

Conread position: 477-662
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 477-672
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 63

Conread position: 477-719
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 87, 106

Conread position: 477-740
Cow position:
Alignm length: 265
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 91

Conread position: 477-745
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 477-749
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 477-762
Cow position:
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 477-766
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-775
Cow position:
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 266

Conread position: 477-816
Cow position:
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 99

Conread position: 477-821
Cow position:
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 155

Conread position: 477-831
Cow position:
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 98

Conread position: 477-835
Cow position:
Alignm length: 363
Alignm identity: 234
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 86, 116

Conread position: 477-837
Cow position:
Alignm length: 365
Alignm identity: 228
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 81, 102

Conread position: 477-843
Cow position:
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 103

Conread position: 477-848
Cow position:
Alignm length: 372
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 477-849
Cow position:
Alignm length: 374
Alignm identity: 254
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 37, 100

Conread position: 477-849
Cow position:
Alignm length: 373
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 477-849
Cow position:
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 477-850
Cow position:
Alignm length: 375
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 24

Conread position: 477-851
Cow position:
Alignm length: 380
Alignm identity: 240
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 79

Conread position: 477-851
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 113

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 84

Conread position: 477-852
Cow position:
Alignm length: 383
Alignm identity: 241
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 146, 90

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 361

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 95

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 0

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 198

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 477-852
Cow position:
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 21

Conread position: 477-852
Cow position:
Alignm length: 398
Alignm identity: 275
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 72, 208

Conread position: 477-852
Cow position:
Alignm length: 379
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 46

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 256
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 50, 91

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 197

Conread position: 477-852
Cow position:
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 66

Conread position: 477-852
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 202

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 100

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 104

Conread position: 477-870
Cow position:
Alignm length: 403
Alignm identity: 263
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 86, 101

Conread position: 478-836
Cow position:
Alignm length: 359
Alignm identity: 226
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 478-848
Cow position:
Alignm length: 376
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 192

Conread position: 478-851
Cow position:
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 136

Conread position: 478-852
Cow position:
Alignm length: 376
Alignm identity: 266
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 72, 33

Conread position: 479-784
Cow position:
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 479-852
Cow position:
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 82

Conread position: 479-852
Cow position:
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 82

Conread position: 480-852
Cow position:
Alignm length: 378
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 199

Conread position: 481-860
Cow position:
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 118

Conread position: 487-852
Cow position:
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 89

Conread position: 487-852
Cow position:
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 487-852
Cow position:
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 188

Conread position: 489-849
Cow position:
Alignm length: 361
Alignm identity: 240
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 497-762
Cow position:
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 497-833
Cow position:
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 14

Conread position: 497-838
Cow position:
Alignm length: 343
Alignm identity: 241
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 200, 28

Conread position: 497-843
Cow position:
Alignm length: 347
Alignm identity: 226
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 497-851
Cow position:
Alignm length: 358
Alignm identity: 230
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 46

Conread position: 497-852
Cow position:
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 74

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 74

Conread position: 498-833
Cow position:
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 70

Conread position: 499-712
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 86

Conread position: 501-848
Cow position:
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 71

Conread position: 518-851
Cow position:
Alignm length: 340
Alignm identity: 239
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 51, 241

Conread position: 528-851
Cow position:
Alignm length: 328
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 55

Conread position: 534-852
Cow position:
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 42

Conread position: 540-855
Cow position:
Alignm length: 317
Alignm identity: 203
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 202, 131

Conread position: 551-852
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 23

Conread position: 557-852
Cow position:
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 581-852
Cow position:
Alignm length: 272
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 0

Conread position: 595-744
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 612-851
Cow position:
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 66

Conread position: 621-852
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 644-884
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 165, 107

Conread position: 667-829
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 25

Conread position: 676-852
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 16

Conread position: 683-861
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 698-852
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 137, 0

Show alignments to all cow chromosomes.