Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 211-420
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 19

Conread position: 221-420
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 155

Conread position: 221-429
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 223-440
Cow position:
Alignm length: 221
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 162, 111

Conread position: 229-464
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 64

Conread position: 440-852
Cow position:
Alignm length: 417
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 111

Conread position: 459-852
Cow position:
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 243

Conread position: 462-833
Cow position:
Alignm length: 372
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 463-843
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 466-824
Cow position:
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 469-848
Cow position:
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 215

Conread position: 469-852
Cow position:
Alignm length: 384
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 475-845
Cow position:
Alignm length: 374
Alignm identity: 237
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 97

Conread position: 475-849
Cow position:
Alignm length: 378
Alignm identity: 244
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 90, 97

Conread position: 475-852
Cow position:
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 65

Conread position: 475-853
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 476-685
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 204, 0

Conread position: 476-703
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 21

Conread position: 476-713
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 476-749
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 27

Conread position: 476-834
Cow position:
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 349

Conread position: 476-847
Cow position:
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 476-848
Cow position:
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 216

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 476-849
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 21

Conread position: 476-851
Cow position:
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 175

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 198

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 190

Conread position: 476-852
Cow position:
Alignm length: 400
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 255

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 233

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 126

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 95

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 476-855
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 68

Conread position: 477-646
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 477-646
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 477-674
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 477-678
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 477-684
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 84, 100

Conread position: 477-702
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 477-728
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 70

Conread position: 477-737
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 477-744
Cow position:
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 477-804
Cow position:
Alignm length: 330
Alignm identity: 209
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 90

Conread position: 477-811
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 49

Conread position: 477-825
Cow position:
Alignm length: 349
Alignm identity: 221
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 477-836
Cow position:
Alignm length: 372
Alignm identity: 237
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 111, 322

Conread position: 477-844
Cow position:
Alignm length: 374
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 87

Conread position: 477-845
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 99

Conread position: 477-848
Cow position:
Alignm length: 374
Alignm identity: 253
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 214, 66

Conread position: 477-848
Cow position:
Alignm length: 372
Alignm identity: 236
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 477-848
Cow position:
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 477-849
Cow position:
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 204

Conread position: 477-851
Cow position:
Alignm length: 378
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 72

Conread position: 477-851
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 75

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 9

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 477-852
Cow position:
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 230

Conread position: 477-852
Cow position:
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 40

Conread position: 477-852
Cow position:
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 158

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 201

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 0

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 138

Conread position: 477-852
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 67

Conread position: 478-833
Cow position:
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 87, 139

Conread position: 479-851
Cow position:
Alignm length: 373
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 481-852
Cow position:
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 44

Conread position: 487-696
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 487-831
Cow position:
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 487-851
Cow position:
Alignm length: 367
Alignm identity: 228
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 78, 87

Conread position: 488-861
Cow position:
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 0

Conread position: 489-852
Cow position:
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 222

Conread position: 491-852
Cow position:
Alignm length: 362
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 497-849
Cow position:
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 497-849
Cow position:
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 66

Conread position: 497-852
Cow position:
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 79

Conread position: 497-852
Cow position:
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 64

Conread position: 497-852
Cow position:
Alignm length: 356
Alignm identity: 248
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 64, 0

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 79

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 71

Conread position: 498-851
Cow position:
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 194

Conread position: 498-852
Cow position:
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 73

Conread position: 498-852
Cow position:
Alignm length: 357
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 38

Conread position: 498-852
Cow position:
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 73

Conread position: 504-852
Cow position:
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 27

Conread position: 517-849
Cow position:
Alignm length: 337
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 289, 47

Conread position: 528-835
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 6, 34

Conread position: 528-851
Cow position:
Alignm length: 328
Alignm identity: 209
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 55

Conread position: 561-852
Cow position:
Alignm length: 299
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 21

Conread position: 569-852
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 126, 30

Conread position: 581-852
Cow position:
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 582-837
Cow position:
Alignm length: 258
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 49

Conread position: 583-849
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 106, 208

Conread position: 583-852
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 92

Conread position: 585-842
Cow position:
Alignm length: 261
Alignm identity: 171
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 90

Conread position: 594-852
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 244

Conread position: 595-749
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 29, 23

Conread position: 617-848
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 49

Conread position: 647-807
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 647-852
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 188, 0

Conread position: 654-856
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 56, 20

Conread position: 663-847
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 663-852
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 667-852
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 170, 0

Conread position: 668-837
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 675-851
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 676-852
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 136, 0

Conread position: 697-851
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 726-852
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 0

Show alignments to all cow chromosomes.