Cow genome map

Conread name: Ss1.1-Pig4-TMW8025D03.5

Conread position: 221-450
Cow position:
Alignm length: 233
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 71

Conread position: 221-471
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 42, 34

Conread position: 445-744
Cow position:
Alignm length: 301
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 20

Conread position: 450-851
Cow position:
Alignm length: 405
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 234

Conread position: 450-852
Cow position:
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 202

Conread position: 473-733
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 111

Conread position: 474-843
Cow position:
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 474-847
Cow position:
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 13

Conread position: 474-850
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 475-712
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 87

Conread position: 475-846
Cow position:
Alignm length: 376
Alignm identity: 256
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 13, 24

Conread position: 475-852
Cow position:
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 168

Conread position: 475-852
Cow position:
Alignm length: 378
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 475-852
Cow position:
Alignm length: 378
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 475-852
Cow position:
Alignm length: 386
Alignm identity: 256
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 9, 98

Conread position: 475-852
Cow position:
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 124

Conread position: 475-852
Cow position:
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 217

Conread position: 476-639
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 476-749
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 108

Conread position: 476-760
Cow position:
Alignm length: 285
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 476-797
Cow position:
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 217

Conread position: 476-835
Cow position:
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 216

Conread position: 476-838
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 106

Conread position: 476-844
Cow position:
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 39

Conread position: 476-848
Cow position:
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 0

Conread position: 476-848
Cow position:
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 48

Conread position: 476-848
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 196

Conread position: 476-849
Cow position:
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 39

Conread position: 476-849
Cow position:
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 152

Conread position: 476-849
Cow position:
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 95

Conread position: 476-849
Cow position:
Alignm length: 374
Alignm identity: 249
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 67, 0

Conread position: 476-850
Cow position:
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 354

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 45

Conread position: 476-852
Cow position:
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 60

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 199

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 476-852
Cow position:
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 277

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 216

Conread position: 476-852
Cow position:
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 150

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 100

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 216

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 216

Conread position: 476-852
Cow position:
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 198

Conread position: 476-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 0

Conread position: 476-861
Cow position:
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 99

Conread position: 476-873
Cow position:
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 477-613
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 477-727
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 99

Conread position: 477-730
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 477-749
Cow position:
Alignm length: 277
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 106

Conread position: 477-804
Cow position:
Alignm length: 330
Alignm identity: 223
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 113, 239

Conread position: 477-812
Cow position:
Alignm length: 337
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 20

Conread position: 477-833
Cow position:
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 215

Conread position: 477-842
Cow position:
Alignm length: 366
Alignm identity: 236
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 477-842
Cow position:
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 34

Conread position: 477-848
Cow position:
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 477-851
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 242, 90

Conread position: 477-851
Cow position:
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 61

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 84

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 105

Conread position: 477-852
Cow position:
Alignm length: 384
Alignm identity: 254
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 102

Conread position: 477-852
Cow position:
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 40

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 359

Conread position: 477-852
Cow position:
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 303

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 99

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 95

Conread position: 477-852
Cow position:
Alignm length: 383
Alignm identity: 246
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 31

Conread position: 477-852
Cow position:
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 96

Conread position: 477-852
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 131

Conread position: 477-852
Cow position:
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 0

Conread position: 478-849
Cow position:
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 231

Conread position: 478-852
Cow position:
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 0

Conread position: 479-816
Cow position:
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 83

Conread position: 480-706
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 118, 0

Conread position: 481-852
Cow position:
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 359

Conread position: 483-816
Cow position:
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 191

Conread position: 487-686
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 72

Conread position: 487-849
Cow position:
Alignm length: 374
Alignm identity: 247
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 84

Conread position: 487-852
Cow position:
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 488-852
Cow position:
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 23

Conread position: 488-852
Cow position:
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 73

Conread position: 488-852
Cow position:
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 82

Conread position: 497-717
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 497-841
Cow position:
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 190

Conread position: 497-852
Cow position:
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 0

Conread position: 497-852
Cow position:
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 79

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 86

Conread position: 497-852
Cow position:
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 163

Conread position: 498-838
Cow position:
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 84

Conread position: 501-852
Cow position:
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 0

Conread position: 513-834
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 71, 83

Conread position: 517-851
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 517-874
Cow position:
Alignm length: 359
Alignm identity: 231
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 336, 47

Conread position: 518-832
Cow position:
Alignm length: 315
Alignm identity: 206
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 532-859
Cow position:
Alignm length: 329
Alignm identity: 212
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 57, 49

Conread position: 546-849
Cow position:
Alignm length: 308
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 64, 297

Conread position: 577-851
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 33

Conread position: 581-850
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 261

Conread position: 594-849
Cow position:
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 201

Conread position: 615-852
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 63

Conread position: 615-852
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 617-852
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 218, 0

Conread position: 644-851
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 659-852
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 178, 0

Conread position: 685-852
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 92, 155

Conread position: 696-852
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 0

Show alignments to all cow chromosomes.