Cow genome map

Conread name: Ss1.1-Pig4-TMW8026J10.5

Conread position: 1-328
Cow position:
Alignm length: 338
Alignm identity: 224
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 35

Conread position: 2-409
Cow position:
Alignm length: 420
Alignm identity: 279
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 196, 19

Conread position: 3-179
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 57

Conread position: 3-207
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 53

Conread position: 47-560
Cow position:
Alignm length: 535
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 7

Conread position: 88-491
Cow position:
Alignm length: 416
Alignm identity: 273
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 38

Conread position: 90-564
Cow position:
Alignm length: 494
Alignm identity: 332
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 109, 10

Conread position: 116-543
Cow position:
Alignm length: 445
Alignm identity: 291
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 25

Conread position: 128-339
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 189

Conread position: 128-497
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 55

Conread position: 172-555
Cow position:
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 197-502
Cow position:
Alignm length: 314
Alignm identity: 223
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 19

Conread position: 207-487
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 71, 15

Conread position: 216-498
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 70

Conread position: 217-536
Cow position:
Alignm length: 338
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 150

Conread position: 218-491
Cow position:
Alignm length: 280
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 43

Conread position: 219-564
Cow position:
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 118

Conread position: 223-512
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 55, 94

Conread position: 225-534
Cow position:
Alignm length: 315
Alignm identity: 223
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 53, 128

Conread position: 240-563
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 243-518
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 12

Conread position: 244-560
Cow position:
Alignm length: 319
Alignm identity: 213
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 115, 43

Conread position: 249-560
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 72

Conread position: 251-559
Cow position:
Alignm length: 326
Alignm identity: 221
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 105

Conread position: 259-559
Cow position:
Alignm length: 304
Alignm identity: 217
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 36, 69

Conread position: 272-498
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 10, 59

Conread position: 272-563
Cow position:
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 61

Conread position: 276-532
Cow position:
Alignm length: 267
Alignm identity: 181
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 52

Conread position: 276-535
Cow position:
Alignm length: 264
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 39

Conread position: 276-560
Cow position:
Alignm length: 288
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 149, 37

Conread position: 303-491
Cow position:
Alignm length: 189
Alignm identity: 153
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 313-487
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 70

Conread position: 321-564
Cow position:
Alignm length: 247
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 41

Conread position: 327-563
Cow position:
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 17

Conread position: 330-543
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 33

Conread position: 330-560
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 330-564
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 85

Conread position: 334-559
Cow position:
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 335-487
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 38

Conread position: 335-496
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 95

Conread position: 335-563
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 48

Conread position: 336-487
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 8, 38

Conread position: 336-560
Cow position:
Alignm length: 226
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-560
Cow position:
Alignm length: 226
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-563
Cow position:
Alignm length: 229
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 48

Conread position: 336-563
Cow position:
Alignm length: 229
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 229
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 336-564
Cow position:
Alignm length: 231
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 246
Alignm identity: 186
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 8, 37

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 338-563
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 75

Conread position: 339-564
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 62, 22

Conread position: 340-560
Cow position:
Alignm length: 222
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 44

Conread position: 341-487
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 52

Conread position: 341-564
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 146

Conread position: 342-487
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 69

Conread position: 342-487
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 346-475
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 346-494
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 346-557
Cow position:
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 48

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 199

Conread position: 346-559
Cow position:
Alignm length: 216
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 199

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 171

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 88

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 121

Conread position: 346-559
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 98

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-564
Cow position:
Alignm length: 220
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 348-556
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 349-563
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 350-485
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 351-557
Cow position:
Alignm length: 208
Alignm identity: 165
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 9, 67

Conread position: 351-564
Cow position:
Alignm length: 214
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 351-564
Cow position:
Alignm length: 214
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 354-563
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 202, 63

Conread position: 354-564
Cow position:
Alignm length: 214
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 356-564
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 0

Conread position: 365-564
Cow position:
Alignm length: 200
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 367-487
Cow position:
Alignm length: 121
Alignm identity: 101
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 367-558
Cow position:
Alignm length: 192
Alignm identity: 150
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 0

Conread position: 368-475
Cow position:
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 368-487
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 368-559
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 120

Conread position: 379-564
Cow position:
Alignm length: 187
Alignm identity: 149
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 126, 79

Conread position: 392-555
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 72

Conread position: 398-559
Cow position:
Alignm length: 162
Alignm identity: 136
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 400-559
Cow position:
Alignm length: 160
Alignm identity: 136
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 7, 0

Conread position: 406-564
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 86, 78

Conread position: 407-564
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 152, 0

Conread position: 412-563
Cow position:
Alignm length: 152
Alignm identity: 131
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 110, 0

Conread position: 415-549
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 21

Conread position: 420-559
Cow position:
Alignm length: 140
Alignm identity: 125
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 426-563
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 0

Conread position: 427-560
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 127, 57

Conread position: 436-557
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 443-564
Cow position:
Alignm length: 122
Alignm identity: 105
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 462-559
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.