Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8026J10.5
        

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 74
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               1-559
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               1-560
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 133
               

               Conread position:
               1-560
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 84
               

               Conread position:
               73-556
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               317
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               329, 19
               

               Conread position:
               117-392
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               82, 241
               

               Conread position:
               117-547
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               118-564
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               299
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               120-559
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               301
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               21, 317
               

               Conread position:
               131-560
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 100
               

               Conread position:
               149-453
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               48, 225
               

               Conread position:
               149-560
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               50, 206
               

               Conread position:
               199-480
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               215-560
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 163
               

               Conread position:
               229-563
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               238-518
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               56, 99
               

               Conread position:
               238-564
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 203
               

               Conread position:
               241-559
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 89
               

               Conread position:
               250-560
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 83
               

               Conread position:
               302-564
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               309-529
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               321-564
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               330-532
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               334-564
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               335-487
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 118
               

               Conread position:
               336-527
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               336-560
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-560
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               337-564
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 24
               

               Conread position:
               338-508
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               28, 149
               

               Conread position:
               340-563
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 193
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               26, 45
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 208
               

               Conread position:
               342-557
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               345-475
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               345-564
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               346-555
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 141
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 187
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               347-559
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 120
               

               Conread position:
               348-564
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               349-505
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               351-563
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 149
               

               Conread position:
               351-564
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 95
               

               Conread position:
               351-564
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 103
               

               Conread position:
               356-487
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               356-487
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 108
               

               Conread position:
               356-490
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               356-496
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               374-559
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               394-564
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               398-564
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               406-564
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               408-564
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               132
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               424-564
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               427-555
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               452-560
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               457-559
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               466-564
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.