Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8026J10.5
        

               Conread position:
               1-259
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               32, 128
               

               Conread position:
               57-263
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               142, 57
               

               Conread position:
               84-375
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               9, 264
               

               Conread position:
               93-409
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               128-556
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               84, 67
               

               Conread position:
               128-564
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               305
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               71, 250
               

               Conread position:
               151-564
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 259
               

               Conread position:
               181-557
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               5, 37
               

               Conread position:
               216-564
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 138
               

               Conread position:
               218-564
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               223-559
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 145
               

               Conread position:
               224-556
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               233-446
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               67, 47
               

               Conread position:
               244-559
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               257-516
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               106, 6
               

               Conread position:
               257-564
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               276-560
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               306-557
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               325-560
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               329-560
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               335-564
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               336-555
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               336-559
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               336-560
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               340-563
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               341-503
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               25, 151
               

               Conread position:
               342-487
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               343-559
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 180
               

               Conread position:
               345-487
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               345-564
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               346-471
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               20, 89
               

               Conread position:
               346-487
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               346-538
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               155
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 113
               

               Conread position:
               346-546
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-547
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-553
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               346-557
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 122
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-560
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               350-564
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               351-529
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               351-557
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               15, 135
               

               Conread position:
               351-564
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 33
               

               Conread position:
               353-560
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               357-487
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               12, 116
               

               Conread position:
               367-560
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               368-487
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               393-560
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               395-564
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               144
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               399-564
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               137
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               408-559
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               130
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               409-564
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               413-564
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               91, 53
               

               Conread position:
               429-564
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               
Show alignments to all cow chromosomes.