Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8026J10.5
        

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 359
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               47, 332
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 94
               

               Conread position:
               1-557
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 101
               

               Conread position:
               1-560
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 57
               

               Conread position:
               6-525
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 31
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               93-529
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 8
               

               Conread position:
               93-560
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 290
               

               Conread position:
               210-475
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               72, 157
               

               Conread position:
               218-478
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               75, 117
               

               Conread position:
               219-445
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               64, 132
               

               Conread position:
               225-558
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 122
               

               Conread position:
               238-564
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               243-443
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 108
               

               Conread position:
               257-556
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               278-564
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               79, 137
               

               Conread position:
               281-564
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               21, 99
               

               Conread position:
               330-564
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               331-487
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               331-564
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               334-487
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               334-559
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 69
               

               Conread position:
               336-556
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-560
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-560
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               337-518
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               337-564
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 24
               

               Conread position:
               338-487
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               338-503
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               338-559
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               342-564
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               345-560
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               346-534
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               20, 113
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               349-529
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               349-564
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 189
               

               Conread position:
               350-560
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               356-559
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               365-564
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               367-559
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               368-503
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               372-559
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               388-529
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               408-559
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               130
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               409-558
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-559
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               61, 0
               
Show alignments to all cow chromosomes.