Cow genome map

Conread name: Ss1.1-Pig4-TMW8026J10.5

Conread position: 1-409
Cow position:
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 12

Conread position: 1-413
Cow position:
Alignm length: 428
Alignm identity: 287
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 112, 51

Conread position: 1-553
Cow position:
Alignm length: 586
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 360

Conread position: 1-560
Cow position:
Alignm length: 579
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 55

Conread position: 1-564
Cow position:
Alignm length: 566
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 19

Conread position: 5-558
Cow position:
Alignm length: 565
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 193

Conread position: 26-545
Cow position:
Alignm length: 535
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 326

Conread position: 85-529
Cow position:
Alignm length: 467
Alignm identity: 313
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 20, 27

Conread position: 89-560
Cow position:
Alignm length: 481
Alignm identity: 318
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 38

Conread position: 149-560
Cow position:
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 35

Conread position: 158-492
Cow position:
Alignm length: 340
Alignm identity: 231
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 20

Conread position: 169-564
Cow position:
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 15

Conread position: 197-525
Cow position:
Alignm length: 330
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 18

Conread position: 211-559
Cow position:
Alignm length: 366
Alignm identity: 234
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 16

Conread position: 225-559
Cow position:
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 25

Conread position: 238-560
Cow position:
Alignm length: 330
Alignm identity: 232
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 103

Conread position: 243-465
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 95

Conread position: 249-555
Cow position:
Alignm length: 319
Alignm identity: 227
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 31, 265

Conread position: 249-564
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 246

Conread position: 249-564
Cow position:
Alignm length: 325
Alignm identity: 217
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 86

Conread position: 250-564
Cow position:
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 27

Conread position: 256-508
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 77

Conread position: 271-564
Cow position:
Alignm length: 300
Alignm identity: 206
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 38

Conread position: 282-543
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 200, 45

Conread position: 291-560
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 80, 26

Conread position: 308-503
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 178

Conread position: 316-559
Cow position:
Alignm length: 249
Alignm identity: 171
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 11

Conread position: 334-530
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 336-556
Cow position:
Alignm length: 222
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 48

Conread position: 336-564
Cow position:
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 48

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 48

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 340-487
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 340-555
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 81

Conread position: 340-560
Cow position:
Alignm length: 222
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 340-563
Cow position:
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 340-563
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 44

Conread position: 343-501
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 346-491
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 346-557
Cow position:
Alignm length: 213
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 65

Conread position: 346-557
Cow position:
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 205

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 11, 138

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 32

Conread position: 346-563
Cow position:
Alignm length: 219
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 348-564
Cow position:
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 351-479
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 354-564
Cow position:
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 355-564
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 115, 0

Conread position: 356-475
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 13, 36

Conread position: 356-563
Cow position:
Alignm length: 209
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 358-564
Cow position:
Alignm length: 207
Alignm identity: 162
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 85, 0

Conread position: 358-564
Cow position:
Alignm length: 213
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 367-559
Cow position:
Alignm length: 193
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 398-560
Cow position:
Alignm length: 163
Alignm identity: 133
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 88, 0

Conread position: 401-560
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 148, 116

Conread position: 404-563
Cow position:
Alignm length: 161
Alignm identity: 134
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 110

Conread position: 408-564
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 409-559
Cow position:
Alignm length: 151
Alignm identity: 124
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 412-564
Cow position:
Alignm length: 153
Alignm identity: 129
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 424-564
Cow position:
Alignm length: 141
Alignm identity: 117
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.