Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8026J10.5
        

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               1-458
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 373
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               333
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 85
               

               Conread position:
               1-560
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 284
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 327
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 14
               

               Conread position:
               41-356
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 240
               

               Conread position:
               88-564
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 40
               

               Conread position:
               129-404
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               69, 139
               

               Conread position:
               129-564
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 241
               

               Conread position:
               195-560
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 40
               

               Conread position:
               199-468
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 172
               

               Conread position:
               201-564
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               213-487
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               70, 132
               

               Conread position:
               216-560
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 83
               

               Conread position:
               228-564
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 64
               

               Conread position:
               237-559
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               252, 50
               

               Conread position:
               243-554
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               249-560
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               269-563
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               15, 67
               

               Conread position:
               275-564
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               102, 66
               

               Conread position:
               277-560
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               278-564
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               214, 13
               

               Conread position:
               282-564
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               137, 14
               

               Conread position:
               283-559
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               300-527
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               313-529
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               8, 150
               

               Conread position:
               317-560
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               110, 61
               

               Conread position:
               330-560
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               335-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               336-487
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               340-512
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               340-529
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               340-564
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               346-529
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-557
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               346-557
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 116
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               20, 108
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 142
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 74
               

               Conread position:
               346-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               346-560
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               346-563
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 155
               

               Conread position:
               348-559
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 119
               

               Conread position:
               349-564
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               114, 11
               

               Conread position:
               351-487
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               6, 39
               

               Conread position:
               351-560
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 22
               

               Conread position:
               351-560
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               5, 120
               

               Conread position:
               351-563
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               351-564
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               7, 108
               

               Conread position:
               351-564
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               353-559
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               353-559
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               354-560
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               356-472
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               356-481
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               356-481
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               356-485
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               108, 120
               

               Conread position:
               356-487
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               357-490
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               357-560
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               363-559
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               365-560
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               158
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               365-564
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               407-560
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 149
               
Show alignments to all cow chromosomes.