Cow genome map

Conread name: Ss1.1-Pig4-TMW8026J10.5

Conread position: 1-169
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 48, 125

Conread position: 178-559
Cow position:
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 197

Conread position: 199-476
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 16

Conread position: 212-496
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 216-492
Cow position:
Alignm length: 283
Alignm identity: 200
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 12, 116

Conread position: 222-563
Cow position:
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 145

Conread position: 224-563
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 225-443
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 141, 55

Conread position: 244-564
Cow position:
Alignm length: 325
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 72

Conread position: 249-564
Cow position:
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 127

Conread position: 300-564
Cow position:
Alignm length: 275
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 317-508
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 7

Conread position: 318-564
Cow position:
Alignm length: 249
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 327-529
Cow position:
Alignm length: 203
Alignm identity: 161
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 327-564
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 17

Conread position: 335-564
Cow position:
Alignm length: 232
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 26

Conread position: 336-498
Cow position:
Alignm length: 164
Alignm identity: 136
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 8, 25

Conread position: 336-563
Cow position:
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 336-564
Cow position:
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 47

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 77

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 47

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 25

Conread position: 337-557
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 337-564
Cow position:
Alignm length: 231
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 338-563
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 340-560
Cow position:
Alignm length: 222
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 340-563
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 340-564
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 159

Conread position: 340-564
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 341-476
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 119

Conread position: 345-470
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 345-491
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 345-559
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 345-564
Cow position:
Alignm length: 220
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 346-557
Cow position:
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 20, 151

Conread position: 346-559
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 346-559
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 348-559
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 64

Conread position: 350-564
Cow position:
Alignm length: 217
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 35

Conread position: 351-553
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 6, 0

Conread position: 351-563
Cow position:
Alignm length: 214
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 351-564
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 27

Conread position: 351-564
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 353-560
Cow position:
Alignm length: 208
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 355-564
Cow position:
Alignm length: 210
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 356-563
Cow position:
Alignm length: 209
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 58

Conread position: 356-564
Cow position:
Alignm length: 209
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 356-564
Cow position:
Alignm length: 209
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 368-487
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 368-559
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 105

Conread position: 374-559
Cow position:
Alignm length: 186
Alignm identity: 152
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 91, 0

Conread position: 407-564
Cow position:
Alignm length: 158
Alignm identity: 132
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 408-543
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 413-562
Cow position:
Alignm length: 150
Alignm identity: 126
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 454-560
Cow position:
Alignm length: 107
Alignm identity: 95
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 454-564
Cow position:
Alignm length: 111
Alignm identity: 98
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 454-564
Cow position:
Alignm length: 111
Alignm identity: 101
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 454-564
Cow position:
Alignm length: 111
Alignm identity: 98
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 454-564
Cow position:
Alignm length: 111
Alignm identity: 99
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Show alignments to all cow chromosomes.