Cow genome map

Conread name: Ss1.1-Pig4-TMW8026J10.5

Conread position: 1-564
Cow position:
Alignm length: 587
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 41

Conread position: 1-564
Cow position:
Alignm length: 582
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 114

Conread position: 2-410
Cow position:
Alignm length: 427
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 127

Conread position: 57-564
Cow position:
Alignm length: 525
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 54

Conread position: 99-488
Cow position:
Alignm length: 412
Alignm identity: 278
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 54, 22

Conread position: 99-528
Cow position:
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 23

Conread position: 114-564
Cow position:
Alignm length: 465
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 105

Conread position: 151-564
Cow position:
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 156-521
Cow position:
Alignm length: 385
Alignm identity: 269
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 153

Conread position: 162-541
Cow position:
Alignm length: 392
Alignm identity: 264
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 14

Conread position: 197-547
Cow position:
Alignm length: 356
Alignm identity: 249
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 35

Conread position: 204-520
Cow position:
Alignm length: 317
Alignm identity: 215
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 215-518
Cow position:
Alignm length: 324
Alignm identity: 226
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 52, 62

Conread position: 216-564
Cow position:
Alignm length: 362
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 153

Conread position: 220-564
Cow position:
Alignm length: 357
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 114

Conread position: 225-464
Cow position:
Alignm length: 241
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 72, 152

Conread position: 225-549
Cow position:
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 143

Conread position: 232-560
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 47, 101

Conread position: 233-560
Cow position:
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 100

Conread position: 238-553
Cow position:
Alignm length: 320
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 100

Conread position: 238-564
Cow position:
Alignm length: 350
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 189

Conread position: 243-505
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 0

Conread position: 244-554
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 68

Conread position: 249-560
Cow position:
Alignm length: 319
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 118

Conread position: 251-564
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 10

Conread position: 276-560
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 147, 31

Conread position: 321-555
Cow position:
Alignm length: 235
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 0

Conread position: 321-564
Cow position:
Alignm length: 245
Alignm identity: 166
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 64

Conread position: 324-505
Cow position:
Alignm length: 182
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 336-558
Cow position:
Alignm length: 224
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 338-487
Cow position:
Alignm length: 153
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 339-560
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 22

Conread position: 340-564
Cow position:
Alignm length: 231
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 340-564
Cow position:
Alignm length: 226
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 81

Conread position: 342-482
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 342-496
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 14, 74

Conread position: 346-559
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 21

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 50

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 219
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 346-559
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 144

Conread position: 346-559
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 346-559
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 141, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 154

Conread position: 346-559
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 349-564
Cow position:
Alignm length: 219
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 121

Conread position: 351-564
Cow position:
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 32

Conread position: 351-564
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 77

Conread position: 351-564
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 352-559
Cow position:
Alignm length: 209
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 11

Conread position: 354-564
Cow position:
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 355-542
Cow position:
Alignm length: 188
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 364-487
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 367-487
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 368-564
Cow position:
Alignm length: 197
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 377-560
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 383-559
Cow position:
Alignm length: 177
Alignm identity: 147
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 384-556
Cow position:
Alignm length: 174
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 128

Conread position: 392-559
Cow position:
Alignm length: 168
Alignm identity: 144
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 397-559
Cow position:
Alignm length: 163
Alignm identity: 138
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 398-553
Cow position:
Alignm length: 156
Alignm identity: 129
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 405-563
Cow position:
Alignm length: 159
Alignm identity: 132
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 412-564
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 422-564
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 128, 0

Conread position: 427-559
Cow position:
Alignm length: 133
Alignm identity: 113
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.