Cow genome map

Conread name: Ss1.1-Pig4-TMW8026J10.5

Conread position: 1-394
Cow position:
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 87

Conread position: 1-418
Cow position:
Alignm length: 435
Alignm identity: 294
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 48, 80

Conread position: 1-513
Cow position:
Alignm length: 535
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 351

Conread position: 1-556
Cow position:
Alignm length: 584
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 37

Conread position: 1-560
Cow position:
Alignm length: 565
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 1-564
Cow position:
Alignm length: 582
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 51

Conread position: 2-239
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 6-556
Cow position:
Alignm length: 571
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 150

Conread position: 54-564
Cow position:
Alignm length: 532
Alignm identity: 342
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 32, 17

Conread position: 72-404
Cow position:
Alignm length: 359
Alignm identity: 244
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 12

Conread position: 215-460
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 159

Conread position: 215-471
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 24

Conread position: 216-411
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 75, 194

Conread position: 225-547
Cow position:
Alignm length: 332
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 112

Conread position: 231-560
Cow position:
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 99

Conread position: 238-529
Cow position:
Alignm length: 297
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 127

Conread position: 239-467
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 24, 102

Conread position: 239-560
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 55, 99

Conread position: 239-560
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 75

Conread position: 243-563
Cow position:
Alignm length: 338
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 12

Conread position: 244-445
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 141

Conread position: 244-560
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 50, 65

Conread position: 247-430
Cow position:
Alignm length: 188
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 87

Conread position: 255-564
Cow position:
Alignm length: 314
Alignm identity: 201
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 49, 36

Conread position: 327-543
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 330-564
Cow position:
Alignm length: 236
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 7

Conread position: 330-564
Cow position:
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 335-564
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 185

Conread position: 336-529
Cow position:
Alignm length: 195
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-560
Cow position:
Alignm length: 226
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 48

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 233
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 47

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 48

Conread position: 336-564
Cow position:
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 336-564
Cow position:
Alignm length: 229
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 231
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 234
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 337-564
Cow position:
Alignm length: 228
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 337-564
Cow position:
Alignm length: 229
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 340-560
Cow position:
Alignm length: 222
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 44

Conread position: 340-564
Cow position:
Alignm length: 227
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 45

Conread position: 340-564
Cow position:
Alignm length: 225
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 340-564
Cow position:
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 52

Conread position: 345-564
Cow position:
Alignm length: 220
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 346-500
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-564
Cow position:
Alignm length: 220
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 108

Conread position: 347-559
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 349-487
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 73

Conread position: 350-564
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 354-563
Cow position:
Alignm length: 210
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 354-564
Cow position:
Alignm length: 211
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 356-482
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 36

Conread position: 356-485
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 356-488
Cow position:
Alignm length: 134
Alignm identity: 111
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 128

Conread position: 376-512
Cow position:
Alignm length: 137
Alignm identity: 115
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 89, 0

Conread position: 391-564
Cow position:
Alignm length: 174
Alignm identity: 143
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 392-564
Cow position:
Alignm length: 173
Alignm identity: 146
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 402-560
Cow position:
Alignm length: 160
Alignm identity: 138
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 6, 0

Conread position: 404-559
Cow position:
Alignm length: 158
Alignm identity: 128
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 68, 0

Conread position: 404-559
Cow position:
Alignm length: 158
Alignm identity: 129
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 415-564
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 430-559
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 436-564
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 446-559
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.