Cow genome map

Conread name: Ss1.1-Pig4-TMW8026J10.5

Conread position: 1-228
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 142

Conread position: 1-564
Cow position:
Alignm length: 573
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 134

Conread position: 156-557
Cow position:
Alignm length: 417
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 153

Conread position: 178-559
Cow position:
Alignm length: 388
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 50

Conread position: 216-445
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 115

Conread position: 216-564
Cow position:
Alignm length: 367
Alignm identity: 258
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 55, 129

Conread position: 217-564
Cow position:
Alignm length: 364
Alignm identity: 236
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 14

Conread position: 220-476
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 119

Conread position: 222-559
Cow position:
Alignm length: 346
Alignm identity: 226
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 9

Conread position: 236-560
Cow position:
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 34

Conread position: 238-562
Cow position:
Alignm length: 327
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 103

Conread position: 255-564
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 50

Conread position: 257-559
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 66

Conread position: 276-559
Cow position:
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 282-387
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 287-467
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 11

Conread position: 293-527
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 123, 35

Conread position: 314-559
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 92, 13

Conread position: 336-558
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-560
Cow position:
Alignm length: 226
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-563
Cow position:
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 26

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 47

Conread position: 338-560
Cow position:
Alignm length: 224
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 338-564
Cow position:
Alignm length: 228
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 46

Conread position: 340-559
Cow position:
Alignm length: 222
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 340-564
Cow position:
Alignm length: 226
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 208

Conread position: 340-564
Cow position:
Alignm length: 227
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 340-564
Cow position:
Alignm length: 226
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 44

Conread position: 341-491
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 58

Conread position: 342-559
Cow position:
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 145

Conread position: 342-564
Cow position:
Alignm length: 225
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 345-560
Cow position:
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 345-564
Cow position:
Alignm length: 220
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 345-564
Cow position:
Alignm length: 222
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 15

Conread position: 345-564
Cow position:
Alignm length: 221
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 23

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 159

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 108

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 119

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 206

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 16

Conread position: 346-560
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 346-563
Cow position:
Alignm length: 220
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 203

Conread position: 348-557
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 65

Conread position: 349-564
Cow position:
Alignm length: 218
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 351-475
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 116

Conread position: 351-479
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 33

Conread position: 351-560
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 106

Conread position: 351-564
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 7, 27

Conread position: 351-564
Cow position:
Alignm length: 215
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 354-564
Cow position:
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 29

Conread position: 356-487
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 356-487
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 356-487
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 356-560
Cow position:
Alignm length: 206
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 356-560
Cow position:
Alignm length: 206
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 374-559
Cow position:
Alignm length: 186
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 374-559
Cow position:
Alignm length: 186
Alignm identity: 149
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 0

Show alignments to all cow chromosomes.