Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026J10.5 |
| Conread position: | 1-189 |
| Cow position: | chr3:14632535-14632349 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 120 |
| Conread position: | 1-212 |
| Cow position: | chr3:29595358-29595571 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 1-214 |
| Cow position: | chr3:19802813-19803030 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-214 |
| Cow position: | chr3:48230841-48230630 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 48, 142 |
| Conread position: | 1-214 |
| Cow position: | chr3:63004568-63004364 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 198, 11 |
| Conread position: | 1-540 |
| Cow position: | chr3:64358005-64357458 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 153 |
| Conread position: | 1-560 |
| Cow position: | chr3:66990927-66991494 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 1-564 |
| Cow position: | chr3:52864305-52863729 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 267 |
| Conread position: | 88-556 |
| Cow position: | chr3:49272575-49272092 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 92, 13 |
| Conread position: | 89-564 |
| Cow position: | chr3:24591397-24590920 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 259 |
| Conread position: | 116-559 |
| Cow position: | chr3:42631383-42631821 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 137-449 |
| Cow position: | chr3:46015624-46015933 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 224 |
| Conread position: | 156-543 |
| Cow position: | chr3:15178706-15179085 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 198-559 |
| Cow position: | chr3:75047754-75047400 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 199-432 |
| Cow position: | chr3:19691092-19690867 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 209-556 |
| Cow position: | chr3:42995632-42995281 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 70, 148 |
| Conread position: | 209-559 |
| Cow position: | chr3:21259878-21259521 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 216-488 |
| Cow position: | chr3:50127658-50127375 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 216-557 |
| Cow position: | chr3:24643248-24643585 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 39 |
| Conread position: | 216-560 |
| Cow position: | chr3:6685860-6686210 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 258 |
| Conread position: | 216-564 |
| Cow position: | chr3:4027832-4028149 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 253 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 218-564 |
| Cow position: | chr3:2907695-2907362 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 220-564 |
| Cow position: | chr3:83233181-83232832 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 117 |
| Conread position: | 225-402 |
| Cow position: | chr3:36127873-36128051 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 226-564 |
| Cow position: | chr3:12679963-12679614 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 231-379 |
| Cow position: | chr3:29597138-29597293 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 131 |
| Conread position: | 232-428 |
| Cow position: | chr3:54342277-54342082 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 106 |
| Conread position: | 233-527 |
| Cow position: | chr3:18728688-18728411 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 233-564 |
| Cow position: | chr3:19722105-19721758 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 244 |
| Conread position: | 236-560 |
| Cow position: | chr3:5883614-5883941 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 237-560 |
| Cow position: | chr3:32841956-32841626 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 32, 159 |
| Conread position: | 238-564 |
| Cow position: | chr3:31415615-31415942 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 40, 122 |
| Conread position: | 238-564 |
| Cow position: | chr3:37625050-37625376 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 128 |
| Conread position: | 243-556 |
| Cow position: | chr3:48230366-48230066 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 249-537 |
| Cow position: | chr3:32616916-32616622 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 84 |
| Conread position: | 249-557 |
| Cow position: | chr3:70887236-70887540 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 178, 19 |
| Conread position: | 250-564 |
| Cow position: | chr3:58947723-58948031 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 82 |
| Conread position: | 251-563 |
| Cow position: | chr3:3981848-3982152 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 256-560 |
| Cow position: | chr3:5995607-5995300 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 259-465 |
| Cow position: | chr3:34091232-34091036 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 266-553 |
| Cow position: | chr3:26836641-26836382 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 274-558 |
| Cow position: | chr3:70097341-70097622 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 134, 17 |
| Conread position: | 277-560 |
| Cow position: | chr3:21304670-21304396 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 162, 31 |
| Conread position: | 281-504 |
| Cow position: | chr3:2710822-2710597 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 309-564 |
| Cow position: | chr3:18463412-18463164 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 13 |
| Conread position: | 316-550 |
| Cow position: | chr3:79432561-79432321 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 324-560 |
| Cow position: | chr3:50011836-50012073 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 327-564 |
| Cow position: | chr3:23290175-23289935 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 228 |
| Conread position: | 327-564 |
| Cow position: | chr3:49677964-49678199 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 330-564 |
| Cow position: | chr3:77423977-77424212 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 331-510 |
| Cow position: | chr3:20870561-20870375 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 5, 44 |
| Conread position: | 333-564 |
| Cow position: | chr3:63003368-63003141 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 27 |
| Conread position: | 336-487 |
| Cow position: | chr3:26822328-26822178 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 6 |
| Conread position: | 336-515 |
| Cow position: | chr3:78027229-78027052 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 336-524 |
| Cow position: | chr3:48060651-48060463 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 336-529 |
| Cow position: | chr3:18811681-18811872 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 336-559 |
| Cow position: | chr3:34030718-34030496 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 336-560 |
| Cow position: | chr3:75040989-75040766 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 336-564 |
| Cow position: | chr3:10239834-10240061 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 336-564 |
| Cow position: | chr3:18542227-18542001 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 336-564 |
| Cow position: | chr3:19756778-19756550 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 336-564 |
| Cow position: | chr3:21182506-21182286 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 336-564 |
| Cow position: | chr3:36881741-36881511 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 336-564 |
| Cow position: | chr3:40823568-40823794 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 336-564 |
| Cow position: | chr3:53515794-53516013 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 337-555 |
| Cow position: | chr3:51940239-51940029 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 337-564 |
| Cow position: | chr3:66620354-66620582 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 47 |
| Conread position: | 338-474 |
| Cow position: | chr3:5829447-5829308 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 338-545 |
| Cow position: | chr3:50915506-50915714 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 340-460 |
| Cow position: | chr3:66638923-66639045 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 340-560 |
| Cow position: | chr3:5954003-5953783 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 340-564 |
| Cow position: | chr3:49545024-49544804 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 340-564 |
| Cow position: | chr3:57484547-57484324 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 164 |
| Conread position: | 340-564 |
| Cow position: | chr3:64017182-64016962 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 342-487 |
| Cow position: | chr3:5047016-5046869 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 342-559 |
| Cow position: | chr3:19736758-19736976 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-559 |
| Cow position: | chr3:45032918-45033136 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 62 |
| Conread position: | 342-564 |
| Cow position: | chr3:45774231-45774001 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 345-557 |
| Cow position: | chr3:34395891-34395684 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 143 |
| Conread position: | 345-564 |
| Cow position: | chr3:49137348-49137137 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 346-478 |
| Cow position: | chr3:47179021-47178890 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 346-557 |
| Cow position: | chr3:20380724-20380937 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 346-557 |
| Cow position: | chr3:68873573-68873360 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 346-558 |
| Cow position: | chr3:36117845-36118057 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:1516337-1516551 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:2917643-2917856 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 346-559 |
| Cow position: | chr3:3523203-3523416 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 203 |
| Conread position: | 346-559 |
| Cow position: | chr3:6782566-6782780 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:7168974-7169189 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:18859596-18859808 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 117 |
| Conread position: | 346-559 |
| Cow position: | chr3:19878840-19879053 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 346-559 |
| Cow position: | chr3:22336070-22336284 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:24314651-24314863 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:32622855-32622641 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:40339930-40339716 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:41211555-41211339 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:46679613-46679827 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:46861121-46860907 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:49613795-49613580 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:64027904-64027690 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 346-559 |
| Cow position: | chr3:64650808-64651022 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 346-563 |
| Cow position: | chr3:14439579-14439361 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 346-563 |
| Cow position: | chr3:68699791-68699572 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 346-564 |
| Cow position: | chr3:7481043-7480828 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 348-474 |
| Cow position: | chr3:38492831-38492957 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 348-564 |
| Cow position: | chr3:594769-594984 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 349-488 |
| Cow position: | chr3:3806519-3806656 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 116 |
| Conread position: | 349-506 |
| Cow position: | chr3:19944235-19944393 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 349-543 |
| Cow position: | chr3:6878862-6878673 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 349-559 |
| Cow position: | chr3:29331086-29330875 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 349-560 |
| Cow position: | chr3:18356311-18356099 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 350-560 |
| Cow position: | chr3:23213880-23213674 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 169 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 351-487 |
| Cow position: | chr3:41000303-41000440 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 351-557 |
| Cow position: | chr3:42432425-42432632 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 137 |
| Conread position: | 351-557 |
| Cow position: | chr3:46502727-46502934 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 351-564 |
| Cow position: | chr3:45895364-45895139 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 7, 108 |
| Conread position: | 351-564 |
| Cow position: | chr3:45974691-45974914 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 7, 108 |
| Conread position: | 351-564 |
| Cow position: | chr3:56340233-56340019 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 351-564 |
| Cow position: | chr3:72630264-72630475 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 33 |
| Conread position: | 354-564 |
| Cow position: | chr3:30314766-30314960 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 354-564 |
| Cow position: | chr3:59861565-59861773 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 355-559 |
| Cow position: | chr3:66890770-66890567 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 356-464 |
| Cow position: | chr3:40157311-40157202 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 356-487 |
| Cow position: | chr3:53713248-53713376 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 356-487 |
| Cow position: | chr3:69211732-69211602 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 356-506 |
| Cow position: | chr3:55229501-55229352 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 20, 124 |
| Conread position: | 356-559 |
| Cow position: | chr3:37969241-37969441 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 357-487 |
| Cow position: | chr3:31354064-31353933 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 357-519 |
| Cow position: | chr3:56321500-56321660 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 368-480 |
| Cow position: | chr3:2634137-2634249 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-487 |
| Cow position: | chr3:2654319-2654438 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 388-560 |
| Cow position: | chr3:74439528-74439700 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 143 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 388-563 |
| Cow position: | chr3:19939104-19939279 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 396-564 |
| Cow position: | chr3:47081176-47081010 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 143 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 398-559 |
| Cow position: | chr3:4737738-4737574 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 85, 151 |
| Conread position: | 399-557 |
| Cow position: | chr3:48842407-48842565 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 137 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 406-564 |
| Cow position: | chr3:29578876-29579034 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 409-556 |
| Cow position: | chr3:77443607-77443752 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 413-555 |
| Cow position: | chr3:27918685-27918827 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-559 |
| Cow position: | chr3:7158459-7158320 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-560 |
| Cow position: | chr3:3054945-3055076 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 431-564 |
| Cow position: | chr3:54341986-54341853 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 451-559 |
| Cow position: | chr3:51242660-51242768 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 459-564 |
| Cow position: | chr3:60208309-60208204 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.