Cow genome map

Conread name: Ss1.1-Pig4-TMW8026J10.5

Conread position: 1-266
Cow position:
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 116

Conread position: 1-415
Cow position:
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 134

Conread position: 1-512
Cow position:
Alignm length: 535
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 119

Conread position: 4-446
Cow position:
Alignm length: 463
Alignm identity: 306
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 18

Conread position: 6-280
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 149

Conread position: 94-424
Cow position:
Alignm length: 334
Alignm identity: 222
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 18

Conread position: 128-492
Cow position:
Alignm length: 376
Alignm identity: 258
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 70, 173

Conread position: 211-559
Cow position:
Alignm length: 350
Alignm identity: 228
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 171, 16

Conread position: 216-564
Cow position:
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 82

Conread position: 218-563
Cow position:
Alignm length: 352
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 224-560
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 110

Conread position: 225-564
Cow position:
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 120

Conread position: 225-564
Cow position:
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 233-556
Cow position:
Alignm length: 349
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 28

Conread position: 243-560
Cow position:
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 127

Conread position: 244-564
Cow position:
Alignm length: 333
Alignm identity: 216
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 61

Conread position: 264-559
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 247, 81

Conread position: 287-495
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 298-564
Cow position:
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 62

Conread position: 304-545
Cow position:
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 18

Conread position: 304-559
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 77, 37

Conread position: 317-539
Cow position:
Alignm length: 225
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 91, 30

Conread position: 319-560
Cow position:
Alignm length: 244
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 36

Conread position: 330-560
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 48, 12

Conread position: 331-472
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 331-564
Cow position:
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 336-558
Cow position:
Alignm length: 224
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-560
Cow position:
Alignm length: 225
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 336-563
Cow position:
Alignm length: 229
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 41

Conread position: 337-560
Cow position:
Alignm length: 226
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 49

Conread position: 337-560
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 338-559
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 340-523
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 13

Conread position: 340-560
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 340-563
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 340-564
Cow position:
Alignm length: 226
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 44

Conread position: 340-564
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 340-564
Cow position:
Alignm length: 227
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 45

Conread position: 340-564
Cow position:
Alignm length: 228
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 341-482
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 126

Conread position: 342-557
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 343-487
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 345-490
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 345-493
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 345-560
Cow position:
Alignm length: 216
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 345-564
Cow position:
Alignm length: 220
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 345-564
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-474
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 346-476
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 39

Conread position: 346-524
Cow position:
Alignm length: 180
Alignm identity: 144
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 346-540
Cow position:
Alignm length: 196
Alignm identity: 153
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 346-557
Cow position:
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 29, 71

Conread position: 346-559
Cow position:
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 346-559
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 78

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 89

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 13

Conread position: 348-559
Cow position:
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 156

Conread position: 348-564
Cow position:
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 156

Conread position: 349-529
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 30

Conread position: 349-560
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 63, 34

Conread position: 349-564
Cow position:
Alignm length: 217
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 350-503
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 350-564
Cow position:
Alignm length: 220
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 351-523
Cow position:
Alignm length: 175
Alignm identity: 148
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 351-560
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 23

Conread position: 354-502
Cow position:
Alignm length: 149
Alignm identity: 122
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 354-559
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 354-564
Cow position:
Alignm length: 211
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 355-494
Cow position:
Alignm length: 140
Alignm identity: 119
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 356-493
Cow position:
Alignm length: 139
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 129

Conread position: 356-560
Cow position:
Alignm length: 205
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 357-564
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 364-558
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 123, 63

Conread position: 365-560
Cow position:
Alignm length: 201
Alignm identity: 161
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 119, 18

Conread position: 372-559
Cow position:
Alignm length: 189
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 11

Conread position: 379-564
Cow position:
Alignm length: 186
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 388-559
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 391-564
Cow position:
Alignm length: 174
Alignm identity: 141
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 394-559
Cow position:
Alignm length: 166
Alignm identity: 138
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 94, 0

Conread position: 398-559
Cow position:
Alignm length: 170
Alignm identity: 137
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 36, 16

Conread position: 398-563
Cow position:
Alignm length: 166
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 400-560
Cow position:
Alignm length: 161
Alignm identity: 134
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 100, 0

Conread position: 401-560
Cow position:
Alignm length: 161
Alignm identity: 129
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 74, 0

Conread position: 406-564
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 117

Conread position: 407-559
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 408-560
Cow position:
Alignm length: 153
Alignm identity: 122
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 410-543
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 414-559
Cow position:
Alignm length: 146
Alignm identity: 126
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 418-564
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 6

Conread position: 420-560
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 420-560
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 430-564
Cow position:
Alignm length: 135
Alignm identity: 111
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 0

Show alignments to all cow chromosomes.