Cow genome map

Conread name: Ss1.1-Pig4-TMW8026J10.5

Conread position: 1-559
Cow position:
Alignm length: 573
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 286

Conread position: 1-564
Cow position:
Alignm length: 584
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 155

Conread position: 2-200
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 169, 31

Conread position: 117-560
Cow position:
Alignm length: 449
Alignm identity: 283
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 34

Conread position: 130-564
Cow position:
Alignm length: 460
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 39

Conread position: 134-560
Cow position:
Alignm length: 456
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 225

Conread position: 143-412
Cow position:
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 228

Conread position: 158-564
Cow position:
Alignm length: 420
Alignm identity: 282
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 182

Conread position: 175-563
Cow position:
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 171

Conread position: 185-521
Cow position:
Alignm length: 356
Alignm identity: 231
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 15

Conread position: 197-559
Cow position:
Alignm length: 372
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 34

Conread position: 215-559
Cow position:
Alignm length: 353
Alignm identity: 243
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 73, 118

Conread position: 216-410
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 128

Conread position: 216-484
Cow position:
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 216-529
Cow position:
Alignm length: 316
Alignm identity: 202
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 267, 51

Conread position: 217-417
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 140

Conread position: 218-559
Cow position:
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 119

Conread position: 218-559
Cow position:
Alignm length: 348
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 71, 10

Conread position: 224-559
Cow position:
Alignm length: 358
Alignm identity: 243
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 36

Conread position: 232-559
Cow position:
Alignm length: 340
Alignm identity: 239
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 46, 171

Conread position: 232-560
Cow position:
Alignm length: 336
Alignm identity: 229
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 41, 7

Conread position: 239-564
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 123

Conread position: 243-525
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 74

Conread position: 243-560
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 40, 184

Conread position: 244-529
Cow position:
Alignm length: 291
Alignm identity: 193
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 58

Conread position: 249-432
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 79

Conread position: 251-559
Cow position:
Alignm length: 318
Alignm identity: 205
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 184

Conread position: 258-557
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 67

Conread position: 267-559
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 55

Conread position: 269-564
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 58

Conread position: 271-557
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 33

Conread position: 273-553
Cow position:
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 56

Conread position: 282-486
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 45

Conread position: 287-564
Cow position:
Alignm length: 280
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 179

Conread position: 296-559
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 308-564
Cow position:
Alignm length: 262
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 313-559
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 60

Conread position: 324-492
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 42, 121

Conread position: 327-487
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 9

Conread position: 327-564
Cow position:
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 22

Conread position: 327-564
Cow position:
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 10

Conread position: 330-564
Cow position:
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 336-454
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 25

Conread position: 336-487
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 17

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 31

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 47

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 26

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 26

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 130

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 336-564
Cow position:
Alignm length: 229
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 336-564
Cow position:
Alignm length: 236
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 17

Conread position: 336-564
Cow position:
Alignm length: 230
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 337-487
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 16

Conread position: 340-564
Cow position:
Alignm length: 227
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 46

Conread position: 340-564
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 44

Conread position: 340-564
Cow position:
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 44

Conread position: 340-564
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 342-558
Cow position:
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 345-560
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 7, 22

Conread position: 345-563
Cow position:
Alignm length: 223
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 15

Conread position: 346-492
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 346-545
Cow position:
Alignm length: 201
Alignm identity: 158
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 161

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 11, 43

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 20, 108

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 346-559
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 346-559
Cow position:
Alignm length: 214
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 346-560
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 346-563
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 68

Conread position: 349-482
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 120

Conread position: 349-564
Cow position:
Alignm length: 216
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 351-487
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 351-559
Cow position:
Alignm length: 210
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 52

Conread position: 351-560
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 36

Conread position: 351-564
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 163

Conread position: 351-564
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 7, 0

Conread position: 351-564
Cow position:
Alignm length: 215
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 146

Conread position: 351-564
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 352-564
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 135, 0

Conread position: 353-529
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 354-564
Cow position:
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 355-560
Cow position:
Alignm length: 206
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 356-481
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 33

Conread position: 356-487
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 33

Conread position: 368-487
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 369-564
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 135, 13

Conread position: 380-559
Cow position:
Alignm length: 180
Alignm identity: 151
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 383-560
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 101, 64

Conread position: 407-563
Cow position:
Alignm length: 157
Alignm identity: 133
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 407-564
Cow position:
Alignm length: 158
Alignm identity: 129
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 408-563
Cow position:
Alignm length: 156
Alignm identity: 130
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 410-564
Cow position:
Alignm length: 155
Alignm identity: 129
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 423-564
Cow position:
Alignm length: 142
Alignm identity: 117
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 443-560
Cow position:
Alignm length: 118
Alignm identity: 101
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.