Cow genome map

Conread name: Ss1.1-Pig4-TMW8026L24.3

Conread position: 1-235
Cow position: chr17:11024924-11024681 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 29, 211

Conread position: 2-208
Cow position: chr17:13936115-13936326 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 35

Conread position: 2-218
Cow position: chr17:18591443-18591230 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 131, 32

Conread position: 2-219
Cow position: chr17:145174-145376 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 37

Conread position: 2-220
Cow position: chr17:932422-932196 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 18

Conread position: 2-220
Cow position: chr17:6071555-6071330 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 114, 32

Conread position: 2-220
Cow position: chr17:22106615-22106840 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 131, 32

Conread position: 2-228
Cow position: chr17:2033219-2032991 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 131, 32

Conread position: 3-113
Cow position: chr17:8222724-8222615 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 3-119
Cow position: chr17:14932848-14932963 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 3-120
Cow position: chr17:14006446-14006330 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 3-130
Cow position: chr17:15351066-15350942 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 3-131
Cow position: chr17:5638870-5638997 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 3-131
Cow position: chr17:5672498-5672625 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 3-131
Cow position: chr17:29079398-29079273 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 3-138
Cow position: chr17:18200757-18200623 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 3-143
Cow position: chr17:5806470-5806611 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 128, 35

Conread position: 3-164
Cow position: chr17:18242017-18241849 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 128, 31

Conread position: 3-182
Cow position: chr17:41549745-41549928 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 34

Conread position: 3-183
Cow position: chr17:17221336-17221149 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 31

Conread position: 3-184
Cow position: chr17:23053152-23052964 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 119, 31

Conread position: 3-184
Cow position: chr17:34236232-34236420 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 35

Conread position: 3-187
Cow position: chr17:43471571-43471760 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 35

Conread position: 3-192
Cow position: chr17:29212653-29212455 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 129, 31

Conread position: 3-206
Cow position: chr17:11084116-11084315 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 3-208
Cow position: chr17:2178884-2178675 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 38, 31

Conread position: 3-208
Cow position: chr17:18123916-18124128 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 129, 31

Conread position: 3-208
Cow position: chr17:37528953-37529165 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 119, 35

Conread position: 3-215
Cow position: chr17:20055155-20054937 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 118, 21

Conread position: 3-216
Cow position: chr17:138627-138412 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 33

Conread position: 3-216
Cow position: chr17:452871-452653 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 129, 31

Conread position: 3-218
Cow position: chr17:29950234-29950015 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 12, 23

Conread position: 3-219
Cow position: chr17:22249233-22249455 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr17:147941-147716 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 34

Conread position: 3-220
Cow position: chr17:184166-183942 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 34

Conread position: 3-220
Cow position: chr17:731472-731692 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position: chr17:1311743-1311967 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position: chr17:1569195-1569421 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 76, 31

Conread position: 3-220
Cow position: chr17:1706439-1706214 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 129, 35

Conread position: 3-220
Cow position: chr17:1708711-1708934 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 31

Conread position: 3-220
Cow position: chr17:1711879-1712102 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 31

Conread position: 3-220
Cow position: chr17:1784522-1784747 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 129, 18

Conread position: 3-220
Cow position: chr17:1970170-1969946 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 130, 43

Conread position: 3-220
Cow position: chr17:2078662-2078452 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 130, 14

Conread position: 3-220
Cow position: chr17:2245040-2245261 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 38

Conread position: 3-220
Cow position: chr17:2265214-2264988 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr17:3780475-3780246 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 127, 31

Conread position: 3-220
Cow position: chr17:4063359-4063136 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 119, 31

Conread position: 3-220
Cow position: chr17:4085087-4084863 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 130, 34

Conread position: 3-220
Cow position: chr17:4480863-4481087 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr17:5043574-5043793 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 113, 31

Conread position: 3-220
Cow position: chr17:6081522-6081306 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 32

Conread position: 3-220
Cow position: chr17:6122802-6122578 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr17:6262875-6262652 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 31

Conread position: 3-220
Cow position: chr17:8994587-8994363 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 128, 43

Conread position: 3-220
Cow position: chr17:9074169-9073945 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr17:10270333-10270552 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 66, 31

Conread position: 3-220
Cow position: chr17:11785903-11785679 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr17:14240088-14239864 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr17:14899741-14899518 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position: chr17:15117836-15117612 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 129, 35

Conread position: 3-220
Cow position: chr17:15140320-15140543 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr17:15325217-15325440 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr17:15708974-15709198 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr17:15719362-15719138 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr17:15721616-15721400 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 158, 34

Conread position: 3-220
Cow position: chr17:15809006-15808782 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position: chr17:15853753-15853525 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 35

Conread position: 3-220
Cow position: chr17:16855078-16855298 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position: chr17:18721859-18722083 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position: chr17:19215376-19215599 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 130, 15

Conread position: 3-220
Cow position: chr17:20089651-20089857 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 159, 31

Conread position: 3-220
Cow position: chr17:20546156-20545933 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr17:21766916-21766692 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 133, 31

Conread position: 3-220
Cow position: chr17:21770699-21770475 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 130, 43

Conread position: 3-220
Cow position: chr17:22233266-22233493 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 99, 51

Conread position: 3-220
Cow position: chr17:22563164-22562941 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 128, 31

Conread position: 3-220
Cow position: chr17:22774417-22774647 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 138, 31

Conread position: 3-220
Cow position: chr17:24026964-24027188 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 120, 31

Conread position: 3-220
Cow position: chr17:24785209-24784991 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 39

Conread position: 3-220
Cow position: chr17:27791757-27791978 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr17:27978130-27977916 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 122, 31

Conread position: 3-220
Cow position: chr17:29156396-29156178 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 132, 31

Conread position: 3-220
Cow position: chr17:30182561-30182785 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 32, 39

Conread position: 3-220
Cow position: chr17:36816678-36816461 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position: chr17:38917009-38917233 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr17:40810770-40810545 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 120, 31

Conread position: 3-220
Cow position: chr17:43991508-43991286 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 136, 35

Conread position: 3-220
Cow position: chr17:44641451-44641675 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 119, 35

Conread position: 3-221
Cow position: chr17:3401688-3401466 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 127, 30

Conread position: 3-222
Cow position: chr17:1457364-1457588 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 128, 31

Conread position: 3-225
Cow position: chr17:23321397-23321630 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 88, 31

Conread position: 3-239
Cow position: chr17:6612041-6611804 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 130, 35

Conread position: 3-312
Cow position: chr17:20094139-20094452 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 130, 31

Conread position: 4-218
Cow position: chr17:15374425-15374209 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 108, 17

Conread position: 4-220
Cow position: chr17:33289944-33290164 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 30

Conread position: 5-220
Cow position: chr17:158299-158079 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 14

Conread position: 5-229
Cow position: chr17:2839051-2838819 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 65, 29

Conread position: 7-186
Cow position: chr17:30448-30262 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 27

Conread position: 7-196
Cow position: chr17:20215106-20214915 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 126, 27

Conread position: 7-220
Cow position: chr17:2176995-2176778 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 27

Conread position: 7-220
Cow position: chr17:14029330-14029550 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 126, 31

Conread position: 7-229
Cow position: chr17:20091591-20091818 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 11

Conread position: 8-220
Cow position: chr17:8204952-8204731 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 125, 26

Conread position: 9-220
Cow position: chr17:15229020-15229236 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 124, 25

Conread position: 9-233
Cow position: chr17:8495752-8495968 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 10-227
Cow position: chr17:20084799-20085024 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 98, 16

Conread position: 11-120
Cow position: chr17:43231157-43231265 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 11-206
Cow position: chr17:19234794-19234593 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 119, 23

Conread position: 11-208
Cow position: chr17:20642725-20642521 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 120, 33

Conread position: 11-220
Cow position: chr17:602906-603123 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 26

Conread position: 11-220
Cow position: chr17:16870256-16870464 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 126, 23

Conread position: 11-220
Cow position: chr17:20390785-20390569 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 111, 27

Conread position: 11-221
Cow position: chr17:16118443-16118654 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 121, 23

Conread position: 11-223
Cow position: chr17:15328292-15328073 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 23

Conread position: 11-236
Cow position: chr17:31311220-31311449 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 83, 23

Conread position: 11-254
Cow position: chr17:26829733-26829978 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 150
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 122, 27

Conread position: 12-201
Cow position: chr17:31425763-31425582 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 13-135
Cow position: chr17:23338040-23338163 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 21

Conread position: 13-220
Cow position: chr17:4210938-4210724 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 118, 21

Conread position: 13-220
Cow position: chr17:13930907-13930692 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 21

Conread position: 13-220
Cow position: chr17:15438802-15438599 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 13-220
Cow position: chr17:29824952-29825166 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 109, 25

Conread position: 14-219
Cow position: chr17:19406294-19406501 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 5

Conread position: 17-168
Cow position: chr17:2269811-2269654 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 17

Conread position: 17-183
Cow position: chr17:12669078-12669249 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 116, 20

Conread position: 17-220
Cow position: chr17:13674501-13674717 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 88, 49

Conread position: 17-220
Cow position: chr17:14250108-14250322 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 20

Conread position: 17-229
Cow position: chr17:33934835-33935051 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 17

Conread position: 18-187
Cow position: chr17:20209880-20210055 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 115, 73

Conread position: 19-205
Cow position: chr17:30412968-30412777 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 18

Conread position: 19-220
Cow position: chr17:10843271-10843064 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 113, 15

Conread position: 19-225
Cow position: chr17:11619203-11618992 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 112, 19

Conread position: 20-187
Cow position: chr17:9752792-9752617 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 17

Conread position: 20-227
Cow position: chr17:1654761-1654973 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 112, 14

Conread position: 21-172
Cow position: chr17:11381317-11381159 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 13

Conread position: 21-220
Cow position: chr17:17133345-17133140 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 16

Conread position: 21-220
Cow position: chr17:24292638-24292431 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 112, 0

Conread position: 21-222
Cow position: chr17:241295-241083 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 69

Conread position: 21-233
Cow position: chr17:21066668-21066884 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 116, 16

Conread position: 23-222
Cow position: chr17:29821135-29820928 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 114, 0

Conread position: 27-294
Cow position: chr17:14906315-14906580 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 15

Conread position: 28-221
Cow position: chr17:18850486-18850284 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 28-233
Cow position: chr17:17383078-17382867 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 102, 14

Conread position: 30-222
Cow position: chr17:16897106-16897305 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 92, 158

Conread position: 31-220
Cow position: chr17:1565175-1564979 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 34-220
Cow position: chr17:41012518-41012328 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 41-220
Cow position: chr17:2583267-2583080 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 42-214
Cow position: chr17:1883241-1883061 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 42-222
Cow position: chr17:38828902-38828714 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 44-233
Cow position: chr17:25739283-25739087 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 79, 187

Conread position: 45-220
Cow position: chr17:9905517-9905699 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 60

Conread position: 46-220
Cow position: chr17:14871648-14871469 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 141

Conread position: 61-208
Cow position: chr17:51109-51263 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 101

Conread position: 66-220
Cow position: chr17:253784-253622 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 66-220
Cow position: chr17:4570198-4570043 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 54, 32

Conread position: 66-220
Cow position: chr17:32407695-32407853 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 71-222
Cow position: chr17:5546427-5546586 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 73-220
Cow position: chr17:23510498-23510656 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 138

Show alignments to all cow chromosomes.