Cow genome map

Conread name: Ss1.1-Pig4-TMW8026L24.3

Conread position: 1-173
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 33

Conread position: 2-131
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 2-188
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 36

Conread position: 2-208
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 11

Conread position: 2-216
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 31

Conread position: 2-220
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 119, 156

Conread position: 2-220
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 32

Conread position: 2-220
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 128, 32

Conread position: 2-225
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 122, 29

Conread position: 3-131
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-139
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 3-165
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 119, 35

Conread position: 3-175
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 17

Conread position: 3-180
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 130, 23

Conread position: 3-183
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 35

Conread position: 3-200
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 31

Conread position: 3-202
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 119, 31

Conread position: 3-205
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 119, 35

Conread position: 3-218
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 132, 31

Conread position: 3-220
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 129, 0

Conread position: 3-220
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 3-220
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 63

Conread position: 3-220
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 42

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 119, 31

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 117, 45

Conread position: 3-220
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 77, 31

Conread position: 3-220
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 119, 38

Conread position: 3-220
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 66

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 119, 31

Conread position: 3-220
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 127, 30

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 128, 31

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 128, 35

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 22

Conread position: 3-220
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 119, 31

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 31

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 119, 28

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 130, 43

Conread position: 3-220
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 88, 35

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 116, 31

Conread position: 3-220
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 31

Conread position: 3-225
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 113, 35

Conread position: 3-226
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 31

Conread position: 3-232
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 90, 31

Conread position: 3-235
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 5-141
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 6, 15

Conread position: 5-220
Cow position:
Alignm length: 222
Alignm identity: 169
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 126, 29

Conread position: 5-220
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 29

Conread position: 5-227
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 32

Conread position: 5-302
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 65, 16

Conread position: 6-182
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 127, 26

Conread position: 7-178
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 108, 27

Conread position: 7-206
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 30

Conread position: 7-209
Cow position:
Alignm length: 211
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 123, 27

Conread position: 7-220
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 130, 27

Conread position: 7-220
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 125, 27

Conread position: 7-220
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 158, 27

Conread position: 7-235
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 116, 27

Conread position: 7-296
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 125, 27

Conread position: 8-220
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 115, 26

Conread position: 11-188
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 25

Conread position: 11-202
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 105, 15

Conread position: 11-213
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 31

Conread position: 11-216
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 111, 35

Conread position: 11-220
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 111, 27

Conread position: 11-220
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 110, 23

Conread position: 11-220
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 122, 25

Conread position: 11-220
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 26

Conread position: 11-220
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 27

Conread position: 11-220
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 111, 23

Conread position: 11-222
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 12-190
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 6

Conread position: 12-222
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 104, 22

Conread position: 13-220
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 102, 21

Conread position: 13-220
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 120, 21

Conread position: 14-220
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 148, 5

Conread position: 16-222
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 117, 18

Conread position: 17-190
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 116, 17

Conread position: 17-220
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 111, 16

Conread position: 17-220
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 120, 20

Conread position: 17-221
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 20

Conread position: 17-227
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 115, 20

Conread position: 19-184
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 111, 18

Conread position: 19-220
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 105, 18

Conread position: 19-233
Cow position:
Alignm length: 222
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 118, 18

Conread position: 21-222
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 27-220
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 106, 49

Conread position: 40-220
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 41-188
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 47

Conread position: 43-220
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 47-233
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 75, 183

Conread position: 56-219
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 99-235
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 61

Conread position: 220-337
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 27

Show alignments to all cow chromosomes.