Cow genome map

Conread name: Ss1.1-Pig4-TMW8026L24.3

Conread position: 2-120
Cow position: chr26:1915530-1915413 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 2-131
Cow position: chr26:26238190-26238062 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 2-200
Cow position: chr26:11362481-11362687 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 25

Conread position: 2-202
Cow position: chr26:21012308-21012116 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 18

Conread position: 2-205
Cow position: chr26:8810064-8809858 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 98, 34

Conread position: 2-208
Cow position: chr26:18800971-18801182 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 120, 37

Conread position: 2-220
Cow position: chr26:5679718-5679493 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 120, 35

Conread position: 2-221
Cow position: chr26:3755209-3754994 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 128, 34

Conread position: 3-168
Cow position: chr26:11269416-11269245 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 7, 32

Conread position: 3-182
Cow position: chr26:7506526-7506712 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 128, 31

Conread position: 3-184
Cow position: chr26:22691577-22691389 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 130, 35

Conread position: 3-188
Cow position: chr26:35560874-35561066 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 119, 35

Conread position: 3-202
Cow position: chr26:22660088-22660295 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 72, 31

Conread position: 3-205
Cow position: chr26:3537309-3537100 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 31

Conread position: 3-206
Cow position: chr26:1088371-1088162 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 114, 35

Conread position: 3-208
Cow position: chr26:18773077-18773289 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 119, 35

Conread position: 3-208
Cow position: chr26:35393897-35394098 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 128, 31

Conread position: 3-213
Cow position: chr26:18857307-18857090 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 129, 43

Conread position: 3-215
Cow position: chr26:9841217-9841434 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 131, 30

Conread position: 3-215
Cow position: chr26:16781368-16781151 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 129, 34

Conread position: 3-218
Cow position: chr26:17393708-17393926 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 119, 34

Conread position: 3-219
Cow position: chr26:25340736-25340958 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 114, 9

Conread position: 3-220
Cow position: chr26:1390168-1389947 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr26:4122855-4122631 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr26:4440567-4440790 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 32, 39

Conread position: 3-220
Cow position: chr26:4548797-4548568 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 97, 31

Conread position: 3-220
Cow position: chr26:4729137-4729360 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 114, 35

Conread position: 3-220
Cow position: chr26:8885031-8884811 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 149, 35

Conread position: 3-220
Cow position: chr26:9115226-9115000 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 38

Conread position: 3-220
Cow position: chr26:10699309-10699528 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 124, 31

Conread position: 3-220
Cow position: chr26:12668639-12668418 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 12, 17

Conread position: 3-220
Cow position: chr26:13183498-13183274 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr26:13806840-13807063 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 128, 16

Conread position: 3-220
Cow position: chr26:14365048-14365260 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 3-220
Cow position: chr26:14488068-14488290 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 119, 31

Conread position: 3-220
Cow position: chr26:14897188-14896964 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 114, 31

Conread position: 3-220
Cow position: chr26:17429288-17429512 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position: chr26:23889599-23889373 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 41

Conread position: 3-220
Cow position: chr26:28706871-28707095 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr26:30594442-30594666 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 128, 35

Conread position: 3-220
Cow position: chr26:34015021-34014797 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 118, 23

Conread position: 3-220
Cow position: chr26:34265151-34264927 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr26:35122055-35122278 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr26:35191360-35191584 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr26:35423686-35423460 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 31

Conread position: 3-222
Cow position: chr26:2670587-2670813 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 130, 31

Conread position: 3-222
Cow position: chr26:4753236-4753014 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 130, 31

Conread position: 3-223
Cow position: chr26:18934207-18934431 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 127, 31

Conread position: 3-229
Cow position: chr26:799342-799575 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 134, 37

Conread position: 3-229
Cow position: chr26:9558693-9558927 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 104, 31

Conread position: 3-233
Cow position: chr26:1620842-1620604 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 31

Conread position: 4-197
Cow position: chr26:3199362-3199562 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 118, 34

Conread position: 4-208
Cow position: chr26:27987404-27987613 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 86, 0

Conread position: 4-220
Cow position: chr26:3230654-3230431 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 30, 39

Conread position: 4-220
Cow position: chr26:17327348-17327125 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 119, 30

Conread position: 5-218
Cow position: chr26:10490425-10490213 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 136, 32

Conread position: 5-220
Cow position: chr26:1637851-1638073 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 128, 33

Conread position: 7-220
Cow position: chr26:3705825-3705607 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 123, 32

Conread position: 7-220
Cow position: chr26:4324525-4324730 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 30

Conread position: 7-220
Cow position: chr26:6426217-6425995 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 109, 27

Conread position: 7-220
Cow position: chr26:8654148-8654365 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 76

Conread position: 7-220
Cow position: chr26:21535545-21535325 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 109, 27

Conread position: 7-220
Cow position: chr26:30586162-30586382 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 115, 19

Conread position: 7-222
Cow position: chr26:12258598-12258818 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 125, 29

Conread position: 8-218
Cow position: chr26:3700151-3699935 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 29

Conread position: 10-183
Cow position: chr26:1885193-1885006 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 16

Conread position: 10-220
Cow position: chr26:21350685-21350472 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 24

Conread position: 11-184
Cow position: chr26:8084005-8083825 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 111, 27

Conread position: 11-220
Cow position: chr26:1346815-1347031 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 121, 27

Conread position: 11-220
Cow position: chr26:2348992-2349208 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 122, 27

Conread position: 11-220
Cow position: chr26:12585359-12585575 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 122, 27

Conread position: 11-220
Cow position: chr26:23590834-23590618 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 117, 23

Conread position: 11-220
Cow position: chr26:26286042-26285826 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 122, 27

Conread position: 11-223
Cow position: chr26:2201709-2201494 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 130, 27

Conread position: 12-237
Cow position: chr26:11290328-11290100 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 6

Conread position: 14-220
Cow position: chr26:35559335-35559547 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 5

Conread position: 14-222
Cow position: chr26:33950194-33950407 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 5

Conread position: 17-220
Cow position: chr26:31793901-31793691 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 115, 21

Conread position: 18-219
Cow position: chr26:8873016-8872809 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 114, 20

Conread position: 18-220
Cow position: chr26:20496703-20496493 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 112, 0

Conread position: 18-220
Cow position: chr26:30625441-30625646 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 118, 16

Conread position: 19-220
Cow position: chr26:18804192-18804400 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 103, 27

Conread position: 20-220
Cow position: chr26:34272241-34272034 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 22

Conread position: 20-221
Cow position: chr26:35335042-35335250 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 17

Conread position: 21-197
Cow position: chr26:20186476-20186295 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 111, 84

Conread position: 22-222
Cow position: chr26:22695188-22694982 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 85, 12

Conread position: 22-233
Cow position: chr26:15892149-15891929 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 210

Conread position: 22-233
Cow position: chr26:18036072-18035855 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 15

Conread position: 25-220
Cow position: chr26:21823467-21823662 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-220
Cow position: chr26:2244335-2244531 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 103, 57

Conread position: 27-220
Cow position: chr26:6321271-6321070 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 105, 0

Conread position: 45-222
Cow position: chr26:19348353-19348534 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 77, 117

Conread position: 51-220
Cow position: chr26:3027474-3027654 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 51-220
Cow position: chr26:3564935-3565115 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 60-230
Cow position: chr26:6030964-6031129 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 226-337
Cow position: chr26:20126188-20126076 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 21

Show alignments to all cow chromosomes.